3AA1
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![BU of 3aa1 by Molmil](/molmil-images/mine/3aa1) | Crystal structure of Actin capping protein in complex with the Cp-binding motif derived from CKIP-1 | Descriptor: | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 23mer peptide from Pleckstrin homology domain-containing family O member 1, F-actin-capping protein subunit alpha-1, ... | Authors: | Takeda, S, Minakata, S, Narita, A, Kitazawa, M, Yamakuni, T, Maeda, Y, Nitanai, Y. | Deposit date: | 2009-11-11 | Release date: | 2010-08-04 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Two distinct mechanisms for actin capping protein regulation--steric and allosteric inhibition Plos Biol., 8, 2010
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3AA6
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![BU of 3aa6 by Molmil](/molmil-images/mine/3aa6) | Crystal structure of Actin capping protein in complex with the Cp-binding motif derived from CD2AP | Descriptor: | 23mer peptide from CD2-associated protein, BARIUM ION, F-actin-capping protein subunit alpha-1, ... | Authors: | Takeda, S, Minakata, S, Narita, A, Kitazawa, M, Yamakuni, T, Maeda, Y, Nitanai, Y. | Deposit date: | 2009-11-11 | Release date: | 2010-08-04 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Two distinct mechanisms for actin capping protein regulation--steric and allosteric inhibition Plos Biol., 8, 2010
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2DW2
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![BU of 2dw2 by Molmil](/molmil-images/mine/2dw2) | Crystal structure of VAP2 from Crotalus atrox venom (Form 2-5 crystal) | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)][2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Catrocollastatin, ... | Authors: | Takeda, S, Igarashi, T, Araki, S. | Deposit date: | 2006-08-02 | Release date: | 2007-07-10 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Crystal structures of catrocollastatin/VAP2B reveal a dynamic, modular architecture of ADAM/adamalysin/reprolysin family proteins Febs Lett., 581, 2007
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2DW0
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![BU of 2dw0 by Molmil](/molmil-images/mine/2dw0) | Crystal structure of VAP2 from Crotalus atrox venom (Form 2-1 crystal) | Descriptor: | 3-(N-HYDROXYCARBOXAMIDO)-2-ISOBUTYLPROPANOYL-TRP-METHYLAMIDE, CALCIUM ION, Catrocollastatin, ... | Authors: | Takeda, S, Igarashi, T, Araki, S. | Deposit date: | 2006-08-02 | Release date: | 2007-07-10 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.15 Å) | Cite: | Crystal structures of catrocollastatin/VAP2B reveal a dynamic, modular architecture of ADAM/adamalysin/reprolysin family proteins Febs Lett., 581, 2007
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2DW1
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![BU of 2dw1 by Molmil](/molmil-images/mine/2dw1) | Crystal structure of VAP2 from Crotalus atrox venom (Form 2-2 crystal) | Descriptor: | 3-(N-HYDROXYCARBOXAMIDO)-2-ISOBUTYLPROPANOYL-TRP-METHYLAMIDE, CALCIUM ION, Catrocollastatin, ... | Authors: | Takeda, S, Igarashi, T, Araki, S. | Deposit date: | 2006-08-02 | Release date: | 2007-07-10 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Crystal structures of catrocollastatin/VAP2B reveal a dynamic, modular architecture of ADAM/adamalysin/reprolysin family proteins Febs Lett., 581, 2007
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7YNE
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![BU of 7yne by Molmil](/molmil-images/mine/7yne) | |
2E3X
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![BU of 2e3x by Molmil](/molmil-images/mine/2e3x) | Crystal structure of Russell's viper venom metalloproteinase | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(N-HYDROXYCARBOXAMIDO)-2-ISOBUTYLPROPANOYL-TRP-METHYLAMIDE, ... | Authors: | Igarashi, T, Takeda, S. | Deposit date: | 2006-11-30 | Release date: | 2007-12-11 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.91 Å) | Cite: | Crystal structure of RVV-X: an example of evolutionary gain of specificity by ADAM proteinases. Febs Lett., 581, 2007
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3AQJ
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![BU of 3aqj by Molmil](/molmil-images/mine/3aqj) | Crystal Structure of a C-terminal domain of the bacteriophage P2 tail spike protein, gpV | Descriptor: | Baseplate assembly protein V, CALCIUM ION, CHLORIDE ION, ... | Authors: | Takeda, S, Yamashita, E, Nakagawa, A. | Deposit date: | 2010-11-06 | Release date: | 2011-08-10 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.27 Å) | Cite: | The host-binding domain of the P2 phage tail spike reveals a trimeric iron-binding structure Acta Crystallogr.,Sect.F, 67, 2011
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7W52
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![BU of 7w52 by Molmil](/molmil-images/mine/7w52) | |
7W51
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![BU of 7w51 by Molmil](/molmil-images/mine/7w51) | |
7W4Z
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![BU of 7w4z by Molmil](/molmil-images/mine/7w4z) | |
7W50
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![BU of 7w50 by Molmil](/molmil-images/mine/7w50) | |
5YDN
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![BU of 5ydn by Molmil](/molmil-images/mine/5ydn) | Mu pahge neck subunit | Descriptor: | Gene product J | Authors: | Takeda, S, Iwasaki, T, Yamashita, E, Nakagawa, A. | Deposit date: | 2017-09-13 | Release date: | 2018-07-11 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Three-dimensional structures of bacteriophage neck subunits are shared in Podoviridae, Siphoviridae and Myoviridae Genes Cells, 23, 2018
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5YVQ
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![BU of 5yvq by Molmil](/molmil-images/mine/5yvq) | Complex of Mu phage tail fiber and its chaperone | Descriptor: | GLYCEROL, Tail fiber assembly protein U, Tail fiber protein S | Authors: | Takeda, S, Sakai, K, Iwazaki, T, Yamashita, E, Nakagawa, A. | Deposit date: | 2017-11-27 | Release date: | 2019-05-22 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (2.103 Å) | Cite: | Phage tail fibre assembly proteins employ a modular structure to drive the correct folding of diverse fibres. Nat Microbiol, 4, 2019
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1A2X
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![BU of 1a2x by Molmil](/molmil-images/mine/1a2x) | COMPLEX OF TROPONIN C WITH A 47 RESIDUE (1-47) FRAGMENT OF TROPONIN I | Descriptor: | CALCIUM ION, TROPONIN C, TROPONIN I | Authors: | Vassylyev, D.G, Takeda, S, Wakatsuki, S, Maeda, K, Maeda, Y. | Deposit date: | 1998-01-13 | Release date: | 1998-07-15 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Crystal structure of troponin C in complex with troponin I fragment at 2.3-A resolution. Proc.Natl.Acad.Sci.USA, 95, 1998
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2BEC
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![BU of 2bec by Molmil](/molmil-images/mine/2bec) | Crystal structure of CHP2 in complex with its binding region in NHE1 and insights into the mechanism of pH regulation | Descriptor: | Calcineurin B homologous protein 2, Sodium/hydrogen exchanger 1, YTTRIUM (III) ION | Authors: | Ben Ammar, Y, Takeda, S, Hisamitsu, T, Mori, H, Wakabayashi, S. | Deposit date: | 2005-10-24 | Release date: | 2006-06-27 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Crystal structure of CHP2 complexed with NHE1-cytosolic region and an implication for pH regulation Embo J., 25, 2006
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3GHM
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![BU of 3ghm by Molmil](/molmil-images/mine/3ghm) | Crystal structure of the exosite-containing fragment of human ADAMTS13 (form-1) | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, A disintegrin and metalloproteinase with thrombospondin motifs 13, ... | Authors: | Akiyama, M, Takeda, S, Kokame, K, Takagi, J, Miyata, T. | Deposit date: | 2009-03-04 | Release date: | 2009-10-27 | Last modified: | 2021-11-10 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | Crystal structures of the non-catalytic domains of ADAMTS13 reveal multiple discontinuous exosites for von Willebrand factor To be Published
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3GHN
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![BU of 3ghn by Molmil](/molmil-images/mine/3ghn) | Crystal structure of the exosite-containing fragment of human ADAMTS13 (form-2) | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, A disintegrin and metalloproteinase with thrombospondin motifs 13, ... | Authors: | Akiyama, M, Takeda, S, Kokame, K, Takagi, J, Miyata, T. | Deposit date: | 2009-03-04 | Release date: | 2009-10-27 | Last modified: | 2021-11-10 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Crystal structures of the non-catalytic domains of ADAMTS13 reveal multiple discontinuous exosites for von Willebrand factor To be Published
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3SBK
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![BU of 3sbk by Molmil](/molmil-images/mine/3sbk) | Russell's viper venom serine proteinase, RVV-V (PPACK-bound form) | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, Vipera russelli proteinase RVV-V gamma | Authors: | Nakayama, D, Ben Ammar, Y, Takeda, S. | Deposit date: | 2011-06-05 | Release date: | 2011-09-07 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.55 Å) | Cite: | Structural basis of coagulation factor V recognition for cleavage by RVV-V Febs Lett., 585, 2011
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3S9B
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![BU of 3s9b by Molmil](/molmil-images/mine/3s9b) | |
3S9C
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![BU of 3s9c by Molmil](/molmil-images/mine/3s9c) | Russell's viper venom serine proteinase, RVV-V in complex with the fragment (residues 1533-1546) of human factor V | Descriptor: | ACETATE ION, Coagulation factor V, Vipera russelli proteinase RVV-V gamma, ... | Authors: | Nakayama, D, Ben Ammar, Y, Takeda, S. | Deposit date: | 2011-06-01 | Release date: | 2011-09-07 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Structural basis of coagulation factor V recognition for cleavage by RVV-V Febs Lett., 585, 2011
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8JU3
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![BU of 8ju3 by Molmil](/molmil-images/mine/8ju3) | Mu phage tail fiber | Descriptor: | Tail fiber protein S,Tail fiber protein S' | Authors: | Yamashita, E, Takeda, S. | Deposit date: | 2023-06-24 | Release date: | 2024-02-28 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Determination of three-dimensional structure of bacteriophase Mu tail fiber To Be Published
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8GSU
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![BU of 8gsu by Molmil](/molmil-images/mine/8gsu) | Crystal structure of human cardiac alpha actin (WT_ADP-Pi) in complex with fragmin F1 domain | Descriptor: | 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, Actin, ... | Authors: | Iwasa, M, Oda, T, Takeda, S. | Deposit date: | 2022-09-07 | Release date: | 2023-03-08 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Mutagenic analysis of actin reveals the mechanism of His161 flipping that triggers ATP hydrolysis. Front Cell Dev Biol, 11, 2023
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8GT4
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![BU of 8gt4 by Molmil](/molmil-images/mine/8gt4) | Crystal structure of human cardiac alpha actin Q137A mutant (AMPPNP state) in complex with fragmin F1 domain | Descriptor: | 1,2-ETHANEDIOL, Actin, alpha cardiac muscle 1, ... | Authors: | Iwasa, M, Oda, T, Takeda, S. | Deposit date: | 2022-09-07 | Release date: | 2023-03-08 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.55 Å) | Cite: | Mutagenic analysis of actin reveals the mechanism of His161 flipping that triggers ATP hydrolysis. Front Cell Dev Biol, 11, 2023
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8GT1
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![BU of 8gt1 by Molmil](/molmil-images/mine/8gt1) | Crystal structure of human cardiac alpha actin A108G mutant (ADP-Pi state) in complex with fragmin F1 domain | Descriptor: | 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ... | Authors: | Iwasa, M, Oda, T, Takeda, S. | Deposit date: | 2022-09-07 | Release date: | 2023-03-08 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.35 Å) | Cite: | Mutagenic analysis of actin reveals the mechanism of His161 flipping that triggers ATP hydrolysis. Front Cell Dev Biol, 11, 2023
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