Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8R6A
DownloadVisualize
BU of 8r6a by Molmil
DTX1 WWE domain in complex with ADP bound to WWE1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, E3 ubiquitin-protein ligase DTX1
Authors:Muenzker, L, Zak, K.M, Boettcher, J.
Deposit date:2023-11-21
Release date:2024-07-31
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A ligand discovery toolbox for the WWE domain family of human E3 ligases.
Commun Biol, 7, 2024
8R7O
DownloadVisualize
BU of 8r7o by Molmil
HUWE1 WWE domain in complex with 2'F-ATP
Descriptor: CHLORIDE ION, E3 ubiquitin-protein ligase HUWE1, SODIUM ION, ...
Authors:Muenzker, L, Boettcher, J.
Deposit date:2023-11-27
Release date:2024-07-31
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:A ligand discovery toolbox for the WWE domain family of human E3 ligases.
Commun Biol, 7, 2024
8R5N
DownloadVisualize
BU of 8r5n by Molmil
DTX1 WWE domain in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, E3 ubiquitin-protein ligase DTX1
Authors:Muenzker, L, Zak, K.M, Boettcher, J.
Deposit date:2023-11-17
Release date:2024-07-31
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (1.812 Å)
Cite:A ligand discovery toolbox for the WWE domain family of human E3 ligases.
Commun Biol, 7, 2024
8R6B
DownloadVisualize
BU of 8r6b by Molmil
DTX1 WWE domain in complex with ADP bound to WWE2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, E3 ubiquitin-protein ligase DTX1
Authors:Muenzker, L, Zak, K.M, Boettcher, J.
Deposit date:2023-11-21
Release date:2024-07-31
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A ligand discovery toolbox for the WWE domain family of human E3 ligases.
Commun Biol, 7, 2024
8RD1
DownloadVisualize
BU of 8rd1 by Molmil
HUWE1 WWE domain in complex with compound 4
Descriptor: 2-(2-hydroxy-2-oxoethyl)-1,3-bis(oxidanylidene)isoindole-5-carboxylic acid, CHLORIDE ION, E3 ubiquitin-protein ligase HUWE1
Authors:Muenzker, L, Zak, K.M, Boettcher, J.
Deposit date:2023-12-07
Release date:2024-07-31
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (1.896 Å)
Cite:A ligand discovery toolbox for the WWE domain family of human E3 ligases.
Commun Biol, 7, 2024
8RD7
DownloadVisualize
BU of 8rd7 by Molmil
HUWE1 WWE domain in complex with ADP-ribose
Descriptor: ACETATE ION, CHLORIDE ION, E3 ubiquitin-protein ligase HUWE1, ...
Authors:Muenzker, L, Zak, K.M, Boettcher, J.
Deposit date:2023-12-07
Release date:2024-07-31
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:A ligand discovery toolbox for the WWE domain family of human E3 ligases.
Commun Biol, 7, 2024
8RD0
DownloadVisualize
BU of 8rd0 by Molmil
HUWE1 WWE domain in complex with compound 3
Descriptor: (1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)acetic acid, CHLORIDE ION, E3 ubiquitin-protein ligase HUWE1
Authors:Muenzker, L, Boettcher, J.
Deposit date:2023-12-07
Release date:2024-07-31
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (1.765 Å)
Cite:A ligand discovery toolbox for the WWE domain family of human E3 ligases.
Commun Biol, 7, 2024
8QPH
DownloadVisualize
BU of 8qph by Molmil
Crystal structure of Lymantria dispar CPV14 polyhedra 14 crystals
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Polyhedrin
Authors:Trincao, J, Warren, A, Crawshaw, A, Sutton, G, Stuart, D, Evans, G.
Deposit date:2023-10-02
Release date:2023-11-08
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:VMXm - sub-micron microfocus beamline for macromolecular crystallography at Diamond Light Source
To Be Published
8QQC
DownloadVisualize
BU of 8qqc by Molmil
Crystal structure of Lymantria dispar CPV14 polyhedra single crystal
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Polyhedrin
Authors:Trincao, J, Warren, A, Crawshaw, A, Sutton, G, Stuart, D, Evans, G.
Deposit date:2023-10-04
Release date:2023-11-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:VMXm - sub-micron microfocus beamline for macromolecular crystallography at Diamond Light Source
To Be Published
8K8T
DownloadVisualize
BU of 8k8t by Molmil
Structure of CUL3-RBX1-KLHL22 complex
Descriptor: Cullin-3, Kelch-like protein 22
Authors:Wang, W, Ling, L, Dai, Z, Zuo, P, Yin, Y.
Deposit date:2023-07-31
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:A conserved N-terminal motif of CUL3 contributes to assembly and E3 ligase activity of CRL3 KLHL22.
Nat Commun, 15, 2024
8K9I
DownloadVisualize
BU of 8k9i by Molmil
Structure of CUL3-RBX1-KLHL22 complex without CUL3 NA motif
Descriptor: Cullin-3, E3 ubiquitin-protein ligase RBX1, N-terminally processed, ...
Authors:Wang, W, Ling, L, Dai, Z, Zuo, P, Yin, Y.
Deposit date:2023-08-01
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:A conserved N-terminal motif of CUL3 contributes to assembly and E3 ligase activity of CRL3 KLHL22.
Nat Commun, 15, 2024
2MYM
DownloadVisualize
BU of 2mym by Molmil
Cullin3 - BTB interface: a novel target for stapled peptides
Descriptor: Cullin-3
Authors:Russo, L, Palmieri, M, Malgieri, G.
Deposit date:2015-01-27
Release date:2015-04-22
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Cullin3 - BTB Interface: A Novel Target for Stapled Peptides.
Plos One, 10, 2015
2MYL
DownloadVisualize
BU of 2myl by Molmil
Cullin3 - BTB interface: a novel target for stapled peptides
Descriptor: Cullin-3
Authors:Russo, L, Palmieri, M, Malgieri, G.
Deposit date:2015-01-27
Release date:2015-04-22
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Cullin3 - BTB Interface: A Novel Target for Stapled Peptides.
Plos One, 10, 2015
1UOQ
DownloadVisualize
BU of 1uoq by Molmil
PROLYL OLIGOPEPTIDASE FROM PORCINE BRAIN, S554A MUTANT WITH BOUND PEPTIDE LIGAND GLU-PHE-SER-PRO
Descriptor: GLYCEROL, PEPTIDE LIGAND GLU-PHE-SER-PRO, PROLYL ENDOPEPTIDASE
Authors:Rea, D, Fulop, V.
Deposit date:2003-09-22
Release date:2003-10-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Electrostatic Environment at the Active Site of Prolyl Oligopeptidase is Highly Influential During Substrate Binding
J.Biol.Chem., 278, 2003
1UOO
DownloadVisualize
BU of 1uoo by Molmil
Prolyl oligopeptidase from porcine brain, S554A mutant with bound peptide ligand GLY-PHE-ARG-PRO
Descriptor: GLYCEROL, PEPTIDE LIGAND GLY-PHE-ARG-PRO, PROLYL ENDOPEPTIDASE
Authors:Rea, D, Fulop, V.
Deposit date:2003-09-22
Release date:2003-10-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Electrostatic Environment at the Active Site of Prolyl Oligopeptidase is Highly Influential During Substrate Binding
J.Biol.Chem., 278, 2003
1UOP
DownloadVisualize
BU of 1uop by Molmil
PROLYL OLIGOPEPTIDASE FROM PORCINE BRAIN, S554A MUTANT WITH BOUND PEPTIDE LIGAND GLY-PHE-GLU-PRO
Descriptor: GLYCEROL, PEPTIDE LIGAND GLY-PHE-GLU-PRO, PROLYL ENDOPEPTIDASE
Authors:Rea, D, Fulop, V.
Deposit date:2003-09-22
Release date:2003-10-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Electrostatic Environment at the Active Site of Prolyl Oligopeptidase is Highly Influential During Substrate Binding
J.Biol.Chem., 278, 2003
1VZ2
DownloadVisualize
BU of 1vz2 by Molmil
PROLYL OLIGOPEPTIDASE FROM PORCINE BRAIN, Y73C/V427C/C255T MUTANT
Descriptor: GLYCEROL, PROLYL ENDOPEPTIDASE
Authors:Rea, D, Fulop, V.
Deposit date:2004-05-14
Release date:2004-07-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Concerted Structural Changes in the Peptidase and the Propeller Domains of Prolyl Oligopeptidase are Required for Substrate Binding
J.Mol.Biol., 340, 2004
1VZ3
DownloadVisualize
BU of 1vz3 by Molmil
PROLYL OLIGOPEPTIDASE FROM PORCINE BRAIN, T597C MUTANT
Descriptor: GLYCEROL, PROLYL ENDOPEPTIDASE
Authors:Rea, D, Fulop, V.
Deposit date:2004-05-14
Release date:2004-07-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Concerted Structural Changes in the Peptidase and the Propeller Domains of Prolyl Oligopeptidase are Required for Substrate Binding
J.Mol.Biol., 340, 2004
6K9N
DownloadVisualize
BU of 6k9n by Molmil
Rice_OTUB_like_catalytic domain
Descriptor: Ubiquitin thioesterase
Authors:Lu, L.N, Liu, L, Wang, F.
Deposit date:2019-06-17
Release date:2020-06-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Met1-specific motifs conserved in OTUB subfamily of green plants enable rice OTUB1 to hydrolyse Met1 ubiquitin chains
Nat Commun, 13, 2022
3WRO
DownloadVisualize
BU of 3wro by Molmil
Minute virus of mice non-structural protein-1N-terminal nuclease domain reveals a unique Zn2+ coordination in the active site pocket and shows a novel mode of DNA recognition at the origin of replication
Descriptor: MANGANESE (II) ION, Non-capsid protein NS-1
Authors:Tewary, S.K, Zhao, H, Tang, L.
Deposit date:2014-02-27
Release date:2015-01-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Structures of minute virus of mice replication initiator protein N-terminal domain: Insights into DNA nicking and origin binding.
Virology, 476C, 2014
3WRN
DownloadVisualize
BU of 3wrn by Molmil
Minute virus of mice non-structural protein-1N-terminal nuclease domain reveals a unique Zn2+ coordination in the active site pocket and shows a novel mode of DNA recognition at the origin of replication
Descriptor: Non-capsid protein NS-1, SODIUM ION, ZINC ION
Authors:Tewary, S.K, Zhao, H, Tang, L.
Deposit date:2014-02-27
Release date:2015-01-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structures of minute virus of mice replication initiator protein N-terminal domain: Insights into DNA nicking and origin binding.
Virology, 476C, 2014
3WRQ
DownloadVisualize
BU of 3wrq by Molmil
Minute virus of mice non-structural protein-1N-terminal nuclease domain reveals a unique Zn2+ coordination in the active site pocket and shows a novel mode of DNA recognition at the origin of replication
Descriptor: NICKEL (II) ION, Non-capsid protein NS-1
Authors:Tewary, S.K, Zhao, H, Tang, L.
Deposit date:2014-02-27
Release date:2015-01-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Structures of minute virus of mice replication initiator protein N-terminal domain: Insights into DNA nicking and origin binding.
Virology, 476C, 2014
3WRR
DownloadVisualize
BU of 3wrr by Molmil
Minute virus of mice non-structural protein-1N-terminal nuclease domain reveals a unique Zn2+ coordination in the active site pocket and shows a novel mode of DNA recognition at the origin of replication
Descriptor: COPPER (II) ION, Non-capsid protein NS-1
Authors:Tewary, S.K, Zhao, H, Tang, L.
Deposit date:2014-02-27
Release date:2015-01-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Structures of minute virus of mice replication initiator protein N-terminal domain: Insights into DNA nicking and origin binding.
Virology, 476C, 2014
7R1V
DownloadVisualize
BU of 7r1v by Molmil
Crystal structure of E.coli BamA beta-barrel in complex with dynobactin A
Descriptor: Dynobactin A, Outer membrane protein assembly factor BamA
Authors:Jakob, R.P, Hiller, S, Maier, T.
Deposit date:2022-02-03
Release date:2022-09-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Computational identification of a systemic antibiotic for gram-negative bacteria.
Nat Microbiol, 7, 2022
7R1W
DownloadVisualize
BU of 7r1w by Molmil
E. coli BAM complex (BamABCDE) bound to dynobactin A
Descriptor: Dynobactin A, Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, ...
Authors:Jakob, R.P, Hiller, S, Maier, T.
Deposit date:2022-02-03
Release date:2022-09-28
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Computational identification of a systemic antibiotic for gram-negative bacteria.
Nat Microbiol, 7, 2022

225399

數據於2024-09-25公開中

PDB statisticsPDBj update infoContact PDBjnumon