Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1GWB
DownloadVisualize
BU of 1gwb by Molmil
STRUCTURE OF GLYCOPROTEIN 1B
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETIC ACID, PLATELET GLYCOPROTEIN IB ALPHA CHAIN, ...
Authors:Emsley, J, Uff, S, Clemetson, K.J.M, Clemetson, J.M, Harrison, T.
Deposit date:2002-03-14
Release date:2003-02-06
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of the Platelet Glycoprotein Ib-Alpha N-Terminal Domain Reveals an Unmasking Mechanism of Receptor Activation
J.Biol.Chem., 277, 2002
5UKZ
DownloadVisualize
BU of 5ukz by Molmil
NMR Solution structure of chemically synthesized antilisterial Pediocin PA-1 M31L analog.
Descriptor: Bacteriocin pediocin PA-1 M31L
Authors:Bedard, F, Hammami, R, Zirah, S, Rebuffat, S, Fliss, I, Biron, E.
Deposit date:2017-01-23
Release date:2018-06-27
Method:SOLUTION NMR
Cite:Synthesis, antimicrobial activity and conformational analysis of the class IIa bacteriocin pediocin PA-1 and analogs thereof.
Sci Rep, 8, 2018
4CU4
DownloadVisualize
BU of 4cu4 by Molmil
FhuA from E. coli in complex with the lasso peptide microcin J25 (MccJ25)
Descriptor: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, 3-HYDROXY-TETRADECANOIC ACID, DIPHOSPHATE, ...
Authors:Mathavan, I, Rebuffat, S, Beis, K.
Deposit date:2014-03-17
Release date:2014-04-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis for Hijacking Siderophore Receptors by Antimicrobial Lasso Peptides.
Nat.Chem.Biol., 10, 2014
6EQC
DownloadVisualize
BU of 6eqc by Molmil
Cryo-EM reconstruction of a complex of a binding protein and human adenovirus C5 hexon
Descriptor: Hexon protein, scFv of 9C12 antibody
Authors:Schmid, M, Ernst, P, Honegger, A, Suomalainen, M, Zimmermann, M, Braun, L, Stauffer, S, Thom, C, Dreier, B, Eibauer, M, Kipar, A, Vogel, V, Greber, U.F, Medalia, O, Plueckthun, A.
Deposit date:2017-10-12
Release date:2018-02-07
Last modified:2018-02-14
Method:ELECTRON MICROSCOPY (7.4 Å)
Cite:Adenoviral vector with shield and adapter increases tumor specificity and escapes liver and immune control.
Nat Commun, 9, 2018
2XAU
DownloadVisualize
BU of 2xau by Molmil
Crystal structure of the Prp43p DEAH-box RNA helicase in complex with ADP
Descriptor: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ...
Authors:Walbott, H, Mouffok, S, Capeyrou, R, Lebaron, S, van Tilbeurgh, H, Henry, Y, Leulliot, N.
Deposit date:2010-03-31
Release date:2010-06-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Prp43P Contains a Processive Helicase Structural Architecture with a Specific Regulatory Domain.
Embo J., 29, 2010
2BP4
DownloadVisualize
BU of 2bp4 by Molmil
Zinc-binding domain of Alzheimer's disease amyloid beta-peptide in TFE-water (80-20) solution
Descriptor: AMYLOID BETA A4 PROTEIN
Authors:Zirah, S, Kozin, S.A, Mazur, A.K, Blond, A, Cheminant, M, Segalas-Milazzo, I, Debey, P, Rebuffat, S.
Deposit date:2005-04-18
Release date:2005-04-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Changes of Region 1-16 of the Alzheimer Disease Amyloid Beta-Peptide Upon Zinc Binding and in Vitro Aging.
J.Biol.Chem., 281, 2006
1ZE9
DownloadVisualize
BU of 1ze9 by Molmil
Zinc-binding domain of Alzheimer's disease amyloid beta-peptide complexed with a zinc (II) cation
Descriptor: 16-mer from Alzheimer's disease amyloid Protein, ZINC ION
Authors:Zirah, S, Kozin, S.A, Mazur, A.K, Blond, A, Cheminant, M, Segalas-Milazzo, I, Debey, P, Rebuffat, S.
Deposit date:2005-04-18
Release date:2005-05-03
Last modified:2013-10-09
Method:SOLUTION NMR
Cite:Structural changes of region 1-16 of the Alzheimer disease amyloid beta-peptide upon zinc binding and in vitro aging.
J.Biol.Chem., 281, 2006
1ZE7
DownloadVisualize
BU of 1ze7 by Molmil
Zinc-binding domain of Alzheimer's disease amyloid beta-peptide in water solution at pH 6.5
Descriptor: 16-mer from Alzheimer's disease amyloid Protein
Authors:Zirah, S, Kozin, S.A, Mazur, A.K, Blond, A, Cheminant, M, Segalas-Milazzo, I, Debey, P, Rebuffat, S.
Deposit date:2005-04-18
Release date:2005-05-03
Last modified:2013-10-09
Method:SOLUTION NMR
Cite:Structural changes of region 1-16 of the Alzheimer disease amyloid beta-peptide upon zinc binding and in vitro aging.
J.Biol.Chem., 281, 2006
2LS1
DownloadVisualize
BU of 2ls1 by Molmil
Structure of Sviceucin, an antibacterial type I lasso peptide from Streptomyces sviceus
Descriptor: Uncharacterized protein
Authors:Li, Y, Ducasse, R, Blond, A, Zirah, S, Goulard, C, Lescop, E, Guittet, E, Pernodet, J, Rebuffat, S.
Deposit date:2012-04-18
Release date:2012-08-15
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure and biosynthesis of Sviceucin, an antibacterial type I lasso peptide from Streptomyces sviceus
To be Published
5OGI
DownloadVisualize
BU of 5ogi by Molmil
Complex of a binding protein and human adenovirus C 5 hexon
Descriptor: 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
Authors:Schmid, M, Ernst, P, Honegger, A, Suomalainen, M, Zimmermann, M, Braun, L, Stauffer, S, Thom, C, Dreier, B, Eibauer, M, Kipar, A, Vogel, V, Greber, U.F, Medalia, O, Plueckthun, A.
Deposit date:2017-07-13
Release date:2018-02-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Adenoviral vector with shield and adapter increases tumor specificity and escapes liver and immune control.
Nat Commun, 9, 2018
1S4T
DownloadVisualize
BU of 1s4t by Molmil
Solution structure of synthetic 21mer peptide spanning region 135-155 (in human numbering) of sheep prion protein
Descriptor: Major prion protein
Authors:Kozin, S.A, Lepage, C, Hui Bon Hoa, G, Rabesona, H, Mazur, A.K, Blond, A, Cheminant, M, Haertle, T, Debey, P, Rebuffat, S.
Deposit date:2004-01-18
Release date:2004-01-27
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Specific recognition between surface loop 2 (132-143) and helix 1 (144-154) within sheep prion protein from in vitro studies of synthetic peptides
To be Published
1S7P
DownloadVisualize
BU of 1s7p by Molmil
Solution structure of thermolysin digested microcin J25
Descriptor: microcin J25
Authors:Rosengren, K.J, Blond, A, Afonso, C, Tabet, J.C, Rebuffat, S, Craik, D.J.
Deposit date:2004-01-30
Release date:2004-06-15
Last modified:2011-07-27
Method:SOLUTION NMR
Cite:Structure of thermolysin cleaved microcin J25: extreme stability of a two-chain antimicrobial peptide devoid of covalent links
Biochemistry, 43, 2004
2N30
DownloadVisualize
BU of 2n30 by Molmil
Structure of Ace-pvhct-NH2
Descriptor: Hemocyanin subunit L2
Authors:Petit, V.W, Rolland, J, Blond, A, Djediat, C, Peduzzi, J, Goulard, C, Bachere, E, Dupont, J, Destoumieux-Garzon, D, Rebuffat, S.
Deposit date:2015-05-19
Release date:2015-06-17
Last modified:2016-01-27
Method:SOLUTION NMR
Cite:A hemocyanin-derived antimicrobial peptide from the penaeid shrimp adopts an alpha-helical structure that specifically permeabilizes fungal membranes.
Biochim.Biophys.Acta, 1860, 2015
2N1C
DownloadVisualize
BU of 2n1c by Molmil
Structure of PvHCt, an antimicrobial peptide from shrimp litopenaeus vannamei
Descriptor: Hemocyanin subunit L2
Authors:Petit, V.W, Rolland, J.L, Blond, A, Djediat, C, Peduzzi, J, Goulard, C, Bachere, E, Dupont, J, Destoumieux-Garzon, D, Rebuffat, S.
Deposit date:2015-03-27
Release date:2015-05-27
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A hemocyanin-derived antimicrobial peptide from the penaeid shrimp adopts an alpha-helical structure that specifically permeabilizes fungal membranes.
Biochim.Biophys.Acta, 1860, 2015
6EE3
DownloadVisualize
BU of 6ee3 by Molmil
X-ray crystal structure of Pf-M1 in complex with inhibitor (6k) and catalytic zinc ion
Descriptor: (1R,2r,3S,5R,7R)-N-[(1R)-2-(hydroxyamino)-2-oxo-1-(3',4',5'-trifluoro[1,1'-biphenyl]-4-yl)ethyl]tricyclo[3.3.1.1~3,7~]decane-2-carboxamide, GLYCEROL, M1 family aminopeptidase, ...
Authors:Drinkwater, N, McGowan, S.
Deposit date:2018-08-13
Release date:2018-12-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Hydroxamic Acid Inhibitors Provide Cross-Species Inhibition of Plasmodium M1 and M17 Aminopeptidases.
J. Med. Chem., 62, 2019
6EED
DownloadVisualize
BU of 6eed by Molmil
X-ray crystal structure of Pf-M1 in complex with inhibitor (6p) and catalytic zinc ion
Descriptor: (2R)-2-[(cyclohexylacetyl)amino]-N-hydroxy-2-(3',4',5'-trifluoro[1,1'-biphenyl]-4-yl)acetamide, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Drinkwater, N, McGowan, S.
Deposit date:2018-08-13
Release date:2018-12-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Hydroxamic Acid Inhibitors Provide Cross-Species Inhibition of Plasmodium M1 and M17 Aminopeptidases.
J. Med. Chem., 62, 2019
6EA2
DownloadVisualize
BU of 6ea2 by Molmil
X-ray crystal structure of Pf-M1 in complex with inhibitor (6h) and catalytic zinc ion
Descriptor: DIMETHYL SULFOXIDE, GLYCEROL, M1 family aminopeptidase, ...
Authors:Drinkwater, N, McGowan, S.
Deposit date:2018-08-02
Release date:2018-12-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Hydroxamic Acid Inhibitors Provide Cross-Species Inhibition of Plasmodium M1 and M17 Aminopeptidases.
J. Med. Chem., 62, 2019
6EAB
DownloadVisualize
BU of 6eab by Molmil
X-ray crystal structure of Pf-M1 in complex with inhibitor (6j) and catalytic zinc ion
Descriptor: GLYCEROL, M1 family aminopeptidase, MAGNESIUM ION, ...
Authors:Drinkwater, N, McGowan, S.
Deposit date:2018-08-02
Release date:2018-12-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Hydroxamic Acid Inhibitors Provide Cross-Species Inhibition of Plasmodium M1 and M17 Aminopeptidases.
J. Med. Chem., 62, 2019
6EAA
DownloadVisualize
BU of 6eaa by Molmil
X-ray crystal structure of Pf-M1 in complex with inhibitor (6i) and catalytic zinc ion
Descriptor: GLYCEROL, M1 family aminopeptidase, MAGNESIUM ION, ...
Authors:Drinkwater, N, McGowan, S.
Deposit date:2018-08-02
Release date:2018-12-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Hydroxamic Acid Inhibitors Provide Cross-Species Inhibition of Plasmodium M1 and M17 Aminopeptidases.
J. Med. Chem., 62, 2019
6EEE
DownloadVisualize
BU of 6eee by Molmil
X-ray crystal structure of Pf-M17 in complex with inhibitor (6k) and regulatory zinc ion
Descriptor: (1R,2r,3S,5R,7R)-N-[(1R)-2-(hydroxyamino)-2-oxo-1-(3',4',5'-trifluoro[1,1'-biphenyl]-4-yl)ethyl]tricyclo[3.3.1.1~3,7~]decane-2-carboxamide, 1,2-ETHANEDIOL, CARBONATE ION, ...
Authors:Drinkwater, N, McGowan, S.
Deposit date:2018-08-13
Release date:2018-12-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Hydroxamic Acid Inhibitors Provide Cross-Species Inhibition of Plasmodium M1 and M17 Aminopeptidases.
J. Med. Chem., 62, 2019
6EA1
DownloadVisualize
BU of 6ea1 by Molmil
X-ray crystal structure of Pf-M1 in complex with inhibitor (6da) and catalytic zinc ion
Descriptor: (2R)-2,3,3,3-tetrafluoro-N-[(1R)-2-(hydroxyamino)-2-oxo-1-(3',4',5'-trifluoro[1,1'-biphenyl]-4-yl)ethyl]propanamide, GLYCEROL, M1 family aminopeptidase, ...
Authors:Drinkwater, N, McGowan, S.
Deposit date:2018-08-02
Release date:2018-12-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.815 Å)
Cite:Hydroxamic Acid Inhibitors Provide Cross-Species Inhibition of Plasmodium M1 and M17 Aminopeptidases.
J. Med. Chem., 62, 2019
6EE4
DownloadVisualize
BU of 6ee4 by Molmil
X-ray crystal structure of Pf-M1 in complex with inhibitor (6m) and catalytic zinc ion
Descriptor: (2R)-2-[(cyclopropylacetyl)amino]-N-hydroxy-2-(3',4',5'-trifluoro[1,1'-biphenyl]-4-yl)acetamide, GLYCEROL, M1 family aminopeptidase, ...
Authors:Drinkwater, N, McGowan, S.
Deposit date:2018-08-13
Release date:2018-12-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Hydroxamic Acid Inhibitors Provide Cross-Species Inhibition of Plasmodium M1 and M17 Aminopeptidases.
J. Med. Chem., 62, 2019
4UT5
DownloadVisualize
BU of 4ut5 by Molmil
Crystal structure of the LecB lectin from Pseudomonas aeruginosa strain PA7 in complex with lewis a tetrasaccharide
Descriptor: CALCIUM ION, LECB LECTIN, beta-D-galactopyranose, ...
Authors:Boukerb, A.M, Decor, A, Tabaroni, R, Varrot, A, Debentzmann, S, Vidal, S, Imberty, A, Cournoyer, B.
Deposit date:2014-07-18
Release date:2015-07-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Genomic Rearrangements and Functional Diversification of Leca and Lecb Lectin-Coding Regions Impacting the Efficacy of Glycomimetics Directed Against Pseudomonas Aeruginosa.
Front.Microbiol., 7, 2016
5OQZ
DownloadVisualize
BU of 5oqz by Molmil
Crystal structure of the lasso peptide rubrivinodin
Descriptor: Rubrivinodin
Authors:Fage, C.D, Hegemann, J.D, Marahiel, M.A.
Deposit date:2017-08-14
Release date:2018-02-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (0.806 Å)
Cite:General rules of fragmentation evidencing lasso structures in CID and ETD.
Analyst, 143, 2018
5EG1
DownloadVisualize
BU of 5eg1 by Molmil
Antibacterial peptide ABC transporter McjD with a resolved lipid
Descriptor: (2S)-3-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-[(6E)-HEXADEC-6-ENOYLOXY]PROPYL (8E)-OCTADEC-8-ENOATE, MAGNESIUM ION, Microcin-J25 export ATP-binding/permease protein McjD, ...
Authors:Choudhury, H.G, Beis, K.
Deposit date:2015-10-26
Release date:2016-08-31
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.42 Å)
Cite:Structural and Functional Basis for Lipid Synergy on the Activity of the Antibacterial Peptide ABC Transporter McjD.
J.Biol.Chem., 291, 2016

 

12>

224201

数据于2024-08-28公开中

PDB statisticsPDBj update infoContact PDBjnumon