Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1YVG
DownloadVisualize
BU of 1yvg by Molmil
Structural analysis of the catalytic domain of tetanus neurotoxin
Descriptor: Tetanus toxin, light chain, ZINC ION
Authors:Rao, K.N, Kumaran, D, Binz, T, Swaminathan, S.
Deposit date:2005-02-15
Release date:2005-03-22
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural analysis of the catalytic domain of tetanus neurotoxin.
Toxicon, 45, 2005
1ZKW
DownloadVisualize
BU of 1zkw by Molmil
Crystal structure of Arg347Ala mutant of botulinum neurotoxin E catalytic domain
Descriptor: CHLORIDE ION, ZINC ION, botulinum neurotoxin type E
Authors:Agarwal, R, Binz, T, Swaminathan, S.
Deposit date:2005-05-04
Release date:2005-06-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Analysis of Active Site Residues of Botulinum Neurotoxin E by Mutational, Functional, and Structural Studies: Glu335Gln Is an Apoenzyme.
Biochemistry, 44, 2005
3UHJ
DownloadVisualize
BU of 3uhj by Molmil
Crystal structure of a probable glycerol dehydrogenase from Sinorhizobium meliloti 1021
Descriptor: GLYCEROL, Probable glycerol dehydrogenase, SELENIUM ATOM, ...
Authors:Agarwal, R, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, LaFleur, J, Seidel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-11-03
Release date:2011-11-23
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Crystal structure of a probable glycerol dehydrogenase from Sinorhizobium meliloti 1021
To be Published
2MFP
DownloadVisualize
BU of 2mfp by Molmil
Solution structure of the circular g-domain analog from the wheat metallothionein Ec-1
Descriptor: CADMIUM ION, EC protein I/II
Authors:Tarasava, K, Johannsen, S, Freisinger, E.
Deposit date:2013-10-14
Release date:2013-11-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution Structure of the Circular gamma-Domain Analog from the Wheat Metallothionein Ec-1.
Molecules, 18, 2013
3WBD
DownloadVisualize
BU of 3wbd by Molmil
Crystal structure of anti-polysialic acid antibody single chain Fv fragment (mAb735) complexed with octasialic acid
Descriptor: CITRATE ANION, N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid-(2-8)-N-acetyl-alpha-neuraminic acid, single chain Fv fragment of mAb735
Authors:Nagae, M, Ikeda, A, Hanashima, S, Kitajima, K, Sato, C, Yamaguchi, Y.
Deposit date:2013-05-14
Release date:2013-10-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of anti-polysialic acid antibody single chain Fv fragment complexed with octasialic acid: insight into the binding preference for polysialic acid.
J.Biol.Chem., 288, 2013
3TXV
DownloadVisualize
BU of 3txv by Molmil
Crystal structure of a probable tagatose 6 phosphate kinase from Sinorhizobium meliloti 1021
Descriptor: Probable tagatose 6-phosphate kinase
Authors:Agarwal, R, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, LaFleur, J, Seidel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-09-23
Release date:2011-10-12
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a probable tagatose 6 phosphate kinase from Sinorhizobium meliloti 1021
To be Published
2OG9
DownloadVisualize
BU of 2og9 by Molmil
Crystal Structure of mandelate racemase/muconate lactonizing enzyme from Polaromonas sp. JS666
Descriptor: CALCIUM ION, Mandelate racemase/muconate lactonizing enzyme
Authors:Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-01-05
Release date:2007-02-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of mandelate racemase/muconate lactonizing enzyme from Polaromonas sp. JS666
To be Published
2OGK
DownloadVisualize
BU of 2ogk by Molmil
Crystal structure of protein AF2318 from Archaeglobus fulgidus, Pfam DUF54
Descriptor: Hypothetical protein
Authors:Rao, K.N, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-01-05
Release date:2007-01-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:UPF201 archaeal specific family members reveal structural similarity to RNA-binding proteins but low likelihood for RNA-binding function.
Plos One, 3, 2008
4M1A
DownloadVisualize
BU of 4m1a by Molmil
Crystal structure of a Domain of unknown function (DUF1904) from Sebaldella termitidis ATCC 33386
Descriptor: Hypothetical protein
Authors:Kumaran, D, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, Al Obaidi, N, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-08-02
Release date:2013-08-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a Domain of unknown function (DUF1904) from Sebaldellatermitidis ATCC 33386
To be Published
2NWU
DownloadVisualize
BU of 2nwu by Molmil
Crystal structure of protein SSO1042 from Sulfolobus solfataricus, Pfam DUF54
Descriptor: UPF0201 protein SSO1042
Authors:Rao, K.N, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-11-16
Release date:2006-12-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:UPF201 archaeal specific family members reveal structural similarity to RNA-binding proteins but low likelihood for RNA-binding function.
Plos One, 3, 2008
2OPJ
DownloadVisualize
BU of 2opj by Molmil
Crystal structure of O-succinylbenzoate synthase
Descriptor: O-succinylbenzoate-CoA synthase
Authors:Sugadev, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-01-29
Release date:2007-02-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of O-succinylbenzoate synthase
To be Published
2OOD
DownloadVisualize
BU of 2ood by Molmil
Crystal structure of guanine deaminase from Bradyrhizobium japonicum
Descriptor: Blr3880 protein, GUANINE, ZINC ION
Authors:Agarwal, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-01-25
Release date:2007-02-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Crystal structure of guanine deaminase from Bradyrhizobium japonicum
To be Published
2OQH
DownloadVisualize
BU of 2oqh by Molmil
Crystal structure of an isomerase from Streptomyces coelicolor A3(2)
Descriptor: Putative isomerase, SULFATE ION
Authors:Agarwal, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-01-31
Release date:2007-02-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal structure of an isomerase from Streptomyces coelicolor
To be Published
2P0L
DownloadVisualize
BU of 2p0l by Molmil
Crystal structure of a Lipoate-protein ligase A
Descriptor: Lipoate-protein ligase A
Authors:Sugadev, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-02-28
Release date:2007-03-20
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Crystal structure of a Lipoate-protein ligase A
To be Published
2OY9
DownloadVisualize
BU of 2oy9 by Molmil
Crystal structure of an unknown conserved protein- Pfam: UPF0223
Descriptor: MAGNESIUM ION, UPF0223 protein BH2638
Authors:Sugadev, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-02-21
Release date:2007-03-20
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of an unknown conserved protein - Pfam: UPF0223
To be Published
2P9B
DownloadVisualize
BU of 2p9b by Molmil
Crystal structure of putative prolidase from Bifidobacterium longum
Descriptor: Possible prolidase
Authors:Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-03-24
Release date:2007-04-03
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of putative prolidase from Bifidobacterium longum
To be Published
2PBZ
DownloadVisualize
BU of 2pbz by Molmil
Crystal structure of an IMP biosynthesis protein PurP from Thermococcus kodakaraensis
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Hypothetical protein
Authors:Agarwal, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-03-29
Release date:2007-04-10
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of an IMP biosynthesis protein PurP from Thermococcus kodakaraensis
To be Published
3T4Z
DownloadVisualize
BU of 3t4z by Molmil
Crystal Structure of NaK2K Channel Y55W Mutant
Descriptor: POTASSIUM ION, Potassium channel protein
Authors:Sauer, D.B, Zeng, W, Raghunathan, S, Jiang, Y.
Deposit date:2011-07-26
Release date:2011-10-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Protein interactions central to stabilizing the K+ channel selectivity filter in a four-sited configuration for selective K+ permeation.
Proc.Natl.Acad.Sci.USA, 108, 2011
4IMZ
DownloadVisualize
BU of 4imz by Molmil
Structural Basis of Substrate Specificity and Protease Inhibition in Norwalk Virus
Descriptor: Genome polyprotein, SODIUM ION, THIOCYANATE ION, ...
Authors:Prasad, B.V.V, Muhaxhiri, Z, Deng, L, Shanker, S, Sankaran, B, Estes, M.K, Palzkill, T, Song, Y.
Deposit date:2013-01-03
Release date:2013-02-20
Last modified:2013-04-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis of substrate specificity and protease inhibition in norwalk virus.
J.Virol., 87, 2013
3U5R
DownloadVisualize
BU of 3u5r by Molmil
Crystal structure of a hypothetical protein SMc02350 from Sinorhizobium meliloti 1021
Descriptor: uncharacterized protein
Authors:Agarwal, R, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-10-11
Release date:2011-10-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of a hypothetical protein SMc02350 from Sinorhizobium meliloti 1021
To be Published
6JBF
DownloadVisualize
BU of 6jbf by Molmil
Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (axial 4'-F)
Descriptor: (1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxycyclohexyl 2,6-diamino-2,4,6-trideoxy-4-fluoro-alpha-D-galactopyranoside, RNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')
Authors:Kanazawa, H, Auffinger, P, Hanessian, S, Kondo, J.
Deposit date:2019-01-25
Release date:2020-01-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (axial 4'-F)
To Be Published
6JBG
DownloadVisualize
BU of 6jbg by Molmil
Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (equatorial 4'-F)
Descriptor: (1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxycyclohexyl 2,6-diamino-2,4,6-trideoxy-4-fluoro-alpha-D-glucopyranoside, RNA (5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3'), RNA (5'-R(P*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*UP*CP*GP*C)-3')
Authors:Kanazawa, H, Auffinger, P, Hanessian, S, Kondo, J.
Deposit date:2019-01-25
Release date:2020-01-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (axial 4'-F)
To Be Published
3SQS
DownloadVisualize
BU of 3sqs by Molmil
Crystal Structure of a putative mandelate racemase/muconate lactonizing protein from Dinoroseobacter shibae DFL 12
Descriptor: ACETATE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Kumaran, D, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-07-06
Release date:2011-07-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of a putative mandelate racemase/muconate lactonizing protein from Dinoroseobacter shibae DFL 12
To be Published
3TCU
DownloadVisualize
BU of 3tcu by Molmil
Crystal Structure of NaK2K Channel D68E Mutant
Descriptor: POTASSIUM ION, Potassium channel protein
Authors:Sauer, D.B, Zeng, W, Raghunathan, S, Jiang, Y.
Deposit date:2011-08-09
Release date:2011-10-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Protein interactions central to stabilizing the K+ channel selectivity filter in a four-sited configuration for selective K+ permeation.
Proc.Natl.Acad.Sci.USA, 108, 2011
4IN2
DownloadVisualize
BU of 4in2 by Molmil
Structural Basis of Substrate Specificity and Protease Inhibition in Norwalk Virus
Descriptor: C-like protease
Authors:Prasad, B.V.V, Muhaxhiri, Z, Deng, L, Shanker, S, Sankaran, B, Estes, M.K, Palzkill, T, Song, Y.
Deposit date:2013-01-03
Release date:2013-02-20
Last modified:2013-04-10
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Structural basis of substrate specificity and protease inhibition in norwalk virus.
J.Virol., 87, 2013

224201

数据于2024-08-28公开中

PDB statisticsPDBj update infoContact PDBjnumon