Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6ZKH
DownloadVisualize
BU of 6zkh by Molmil
Complex I with NADH, open1
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, ...
Authors:Kampjut, D, Sazanov, L.A.
Deposit date:2020-06-30
Release date:2020-10-07
Last modified:2020-11-11
Method:ELECTRON MICROSCOPY (3 Å)
Cite:The coupling mechanism of mammalian respiratory complex I.
Science, 370, 2020
6ZKV
DownloadVisualize
BU of 6zkv by Molmil
Deactive complex I, open4
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, ADENOSINE MONOPHOSPHATE, ...
Authors:Kampjut, D, Sazanov, L.A.
Deposit date:2020-06-30
Release date:2020-10-07
Last modified:2020-11-11
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:The coupling mechanism of mammalian respiratory complex I.
Science, 370, 2020
1GMN
DownloadVisualize
BU of 1gmn by Molmil
CRYSTAL STRUCTURES OF NK1-HEPARIN COMPLEXES REVEAL THE BASIS FOR NK1 ACTIVITY AND ENABLE ENGINEERING OF POTENT AGONISTS OF THE MET RECEPTOR
Descriptor: 2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, HEPATOCYTE GROWTH FACTOR
Authors:Lietha, D, Chirgadze, D.Y, Mulloy, B, Blundell, T.L, Gherardi, E.
Deposit date:2001-09-19
Release date:2001-10-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures of Nk1-Heparin Complexes Reveal the Basis for Nk1 Activity and Enable Engineering of Potent Agonists of the met Receptor
Embo J., 20, 2001
6ZCM
DownloadVisualize
BU of 6zcm by Molmil
Crystal structure of YTHDC1 with compound DHU_DC1_180
Descriptor: 6-[[cyclopropyl-[(7-methoxy-1,3-benzodioxol-5-yl)methyl]amino]methyl]-1~{H}-pyrimidine-2,4-dione, SULFATE ION, YTHDC1
Authors:Bedi, R.K, Huang, D, Wiedmer, L, Caflisch, A.
Deposit date:2020-06-11
Release date:2020-07-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Atomistic and Thermodynamic Analysis of N6-Methyladenosine (m 6 A) Recognition by the Reader Domain of YTHDC1.
J Chem Theory Comput, 17, 2021
7OV8
DownloadVisualize
BU of 7ov8 by Molmil
Crystal structure of pig purple acid phosphatase in complex with 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid (HEPES) and glycerol
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Feder, D, McGeary, R.P, Guddat, L.W, Schenk, G.
Deposit date:2021-06-14
Release date:2022-03-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Rational Design of Potent Inhibitors of a Metallohydrolase Using a Fragment-Based Approach.
Chemmedchem, 16, 2021
1GLB
DownloadVisualize
BU of 1glb by Molmil
STRUCTURE OF THE REGULATORY COMPLEX OF ESCHERICHIA COLI IIIGLC WITH GLYCEROL KINASE
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLUCOSE-SPECIFIC PROTEIN IIIGlc, GLYCEROL, ...
Authors:Hurley, J.H, Worthylake, D, Faber, H.R, Meadow, N.D, Roseman, S, Pettigrew, D.W, Remington, S.J.
Deposit date:1992-10-28
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the regulatory complex of Escherichia coli IIIGlc with glycerol kinase.
Science, 259, 1993
1V0B
DownloadVisualize
BU of 1v0b by Molmil
Crystal structure of the t198a mutant of pfpk5
Descriptor: CELL DIVISION CONTROL PROTEIN 2 HOMOLOG
Authors:Holton, S, Merckx, A, Burgess, D, Doerig, C, Noble, M, Endicott, J.
Deposit date:2004-03-26
Release date:2004-03-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of P. Falciparum Pfpk5 Test the Cdk Regulation Paradigm and Suggest Mechanisms of Small Molecule Inhibition
Structure, 11, 2003
6YYL
DownloadVisualize
BU of 6yyl by Molmil
Crystal structure of S. pombe Mei2 RRM3 domain
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Meiosis protein mei2, ...
Authors:Graille, M, Hazra, D.
Deposit date:2020-05-05
Release date:2020-12-23
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:A scaffold lncRNA shapes the mitosis to meiosis switch.
Nat Commun, 12, 2021
8B8F
DownloadVisualize
BU of 8b8f by Molmil
Atomic structure of the beta-trefoil domain of the Laccaria bicolor lectin LBL in complex with lactose
Descriptor: N-terminal beta-trefoil domain of the lectin LBL from Laccaria bicolor, beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Acebron, I, Campanero-Rhodes, M.A, Solis, D, Menendez, M, Garcia, C, Lillo, M.P, Mancheno, J.M.
Deposit date:2022-10-04
Release date:2023-02-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1 Å)
Cite:Atomic crystal structure and sugar specificity of a beta-trefoil lectin domain from the ectomycorrhizal basidiomycete Laccaria bicolor.
Int.J.Biol.Macromol., 233, 2023
1GKN
DownloadVisualize
BU of 1gkn by Molmil
Structure Determination and Rational Mutagenesis reveal binding surface of immune adherence receptor, CR1 (CD35)
Descriptor: COMPLEMENT RECEPTOR TYPE 1
Authors:Smith, B.O, Mallin, R.L, Krych-Goldberg, M, Wang, X, Hauhart, R.E, Bromek, K, Uhrin, D, Atkinson, J.P, Barlow, P.N.
Deposit date:2001-08-16
Release date:2002-04-18
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of the C3B Binding Site of Cr1 (Cd35), the Immune Adherence Receptor
Cell(Cambridge,Mass.), 108, 2002
1GHQ
DownloadVisualize
BU of 1ghq by Molmil
CR2-C3D COMPLEX STRUCTURE
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, COMPLEMENT C3, CR2/CD121/C3D/EPSTEIN-BARR VIRUS RECEPTOR, ...
Authors:Szakonyi, G, Guthridge, J.M, Li, D, Holers, V.M, Chen, X.S.
Deposit date:2001-01-11
Release date:2001-06-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structure of complement receptor 2 in complex with its C3d ligand.
Science, 292, 2001
1GN0
DownloadVisualize
BU of 1gn0 by Molmil
Escherichia coli GlpE sulfurtransferase soaked with KCN
Descriptor: 1,2-ETHANEDIOL, SODIUM ION, THIOSULFATE SULFURTRANSFERASE GLPE
Authors:Spallarossa, A, Donahue, J.T, Larson, T.J, Bolognesi, M, Bordo, D.
Deposit date:2001-10-01
Release date:2001-11-29
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Escherichia Coli Glpe is a Prototype Sulfurtransferase for the Single-Domain Rhodanese Homology Superfamily
Structure, 9, 2001
6ZKE
DownloadVisualize
BU of 6zke by Molmil
Complex I during turnover, open2
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, ...
Authors:Kampjut, D, Sazanov, L.A.
Deposit date:2020-06-30
Release date:2020-10-07
Last modified:2020-11-11
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:The coupling mechanism of mammalian respiratory complex I.
Science, 370, 2020
1UTB
DownloadVisualize
BU of 1utb by Molmil
DntR from Burkholderia sp. strain DNT
Descriptor: ACETATE ION, GLYCEROL, LYSR-TYPE REGULATORY PROTEIN
Authors:Smirnova, I.A, Dian, C, Leonard, G.A, McSweeney, S, Birse, D, Brzezinski, P.
Deposit date:2003-12-05
Release date:2004-07-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Development of a Bacterial Biosensor for Nitrotoluenes: The Crystal Structure of the Transcriptional Regulator Dntr
J.Mol.Biol., 340, 2004
6Z43
DownloadVisualize
BU of 6z43 by Molmil
Cryo-EM Structure of SARS-CoV-2 Spike : H11-D4 Nanobody Complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody, ...
Authors:Ruza, R.R, Duyvesteyn, H.M.E, Shah, P, Carrique, L, Ren, J, Malinauskas, T, Zhou, D, Stuart, D.I, Naismith, J.H.
Deposit date:2020-05-22
Release date:2020-06-03
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis for a potent neutralising single-domain antibody that blocks SARS-CoV-2 binding to its receptor ACE2
To Be Published
1GJO
DownloadVisualize
BU of 1gjo by Molmil
The FGFr2 tyrosine kinase domain
Descriptor: FIBROBLAST GROWTH FACTOR RECEPTOR 2, SULFATE ION
Authors:Ceska, T.A, Owens, R, Doyle, C, Hamlyn, P, Crabbe, T, Moffat, D, Davis, J, Martin, R, Perry, M.J.
Deposit date:2001-07-31
Release date:2003-08-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Fgfr2 Tyrosine Kinase Domain
To be Published
1UW0
DownloadVisualize
BU of 1uw0 by Molmil
Solution structure of the zinc-finger domain from DNA ligase IIIa
Descriptor: DNA LIGASE III, ZINC ION
Authors:Kulczyk, A.W, Yang, J.-C, Neuhaus, D.
Deposit date:2004-01-27
Release date:2004-08-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure and DNA Binding of the Zinc-Finger Domain from DNA Ligase Iiialpha
J.Mol.Biol., 341, 2004
6ZKS
DownloadVisualize
BU of 6zks by Molmil
Deactive complex I, open1
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, ADENOSINE MONOPHOSPHATE, ...
Authors:Kampjut, D, Sazanov, L.A.
Deposit date:2020-06-30
Release date:2020-10-07
Last modified:2020-11-11
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The coupling mechanism of mammalian respiratory complex I.
Science, 370, 2020
8B97
DownloadVisualize
BU of 8b97 by Molmil
N-terminal beta-trefoil lectin domain of the Laccaria bicolor lectin in complex with N-acetyl-lactosamine
Descriptor: Beta-trefoil domain of the LBL lectin, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Acebron, I, Campanero-Rhodes, M.A, Solis, D, Menendez, M, Garcia, C, Lillo, M.P, Mancheno, J.M.
Deposit date:2022-10-05
Release date:2023-02-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Atomic crystal structure and sugar specificity of a beta-trefoil lectin domain from the ectomycorrhizal basidiomycete Laccaria bicolor.
Int.J.Biol.Macromol., 233, 2023
1UWL
DownloadVisualize
BU of 1uwl by Molmil
1.76A Structure of Urocanate Hydratase from Pseudomonas putida
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, UROCANATE HYDRATASE
Authors:Kessler, D, Retey, J, Schulz, G.E.
Deposit date:2004-02-05
Release date:2004-08-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structure and Action of Urocanase
J.Mol.Biol., 342, 2004
1ZXL
DownloadVisualize
BU of 1zxl by Molmil
Synthesis, Biological Activity, and X-Ray Crystal Structural Analysis of Diaryl Ether Inhibitors of Malarial Enoyl ACP Reductase. Part 1:4'-Substituted Triclosan Derivatives
Descriptor: N-[3-CHLORO-4-(4-CHLORO-2-HYDROXYPHENOXY)PHENYL]MORPHOLINE-4-CARBOXAMIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, enoyl-acyl carrier reductase
Authors:Freundlich, J.S, Anderson, J.W, Sarantakis, D, Shieh, H.M, Yu, M, Lucumi, E, Kuo, M, Schiehser, G.A, Jacobus, D.P, Jacobs Jr, W.R, Fidock, D.A, Sacchettini, J.C.
Deposit date:2005-06-08
Release date:2006-06-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Synthesis, biological activity, and X-ray crystal structural analysis of diaryl ether inhibitors of malarial enoyl acyl carrier protein reductase. Part 1: 4'-Substituted triclosan derivatives.
Bioorg.Med.Chem.Lett., 15, 2005
8BEV
DownloadVisualize
BU of 8bev by Molmil
Cryo-EM structure of SARS-CoV-2 spike (HexaPro variant) in complex with nanobody W25 (map 3, focus refinement on RBD, W25 and adjacent NTD)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Lauer, S, Spahn, C.M.T, Schwefel, D.
Deposit date:2022-10-21
Release date:2023-03-08
Method:ELECTRON MICROSCOPY (5.92 Å)
Cite:Cryo-EM structure of SARS-CoV-2 spike (HexaPro variant) in complex with nanobody W25 (map 3, focus refinement on RBD, W25 and adjacent NTD)
To Be Published
1UXI
DownloadVisualize
BU of 1uxi by Molmil
Large improvement in the thermal stability of a tetrameric malate dehydrogenase by single point mutations at the dimer-dimer interface
Descriptor: FUMARIC ACID, MALATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Bjork, A, Dalhus, B, Mantzilas, D, Eijsink, V.G.H, Sirevag, R.
Deposit date:2004-02-25
Release date:2004-08-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Large Improvement in the Thermal Stability of a Tetrameric Malate Dehydrogenase by Single Point Mutations at the Dimer-Dimer Interface.
J.Mol.Biol., 341, 2004
1GQL
DownloadVisualize
BU of 1gql by Molmil
Structure of Pseudomonas cellulosa alpha-D-glucuronidase complexed with glucuronic acid and xylotriose
Descriptor: 1,2-ETHANEDIOL, ALPHA-D-GLUCURONIDASE, COBALT (II) ION, ...
Authors:Nurizzo, D, Nagy, T, Gilbert, H.J, Davies, G.J.
Deposit date:2001-11-26
Release date:2002-09-26
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:The Structural Basis for Catalysis and Specificity of the Pseudomonas Cellulosa Alpha-Glucuronidase, Glca67A
Structure, 10, 2002
1UXG
DownloadVisualize
BU of 1uxg by Molmil
Large improvement in the thermal stability of a tetrameric malate dehydrogenase by single point mutations at the dimer-dimer interface.
Descriptor: FUMARIC ACID, MALATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Bjork, A, Dalhus, B, Mantzilas, D, Eijsink, V.G.H, Sirevag, R.
Deposit date:2004-02-25
Release date:2004-08-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Large Improvement in the Thermal Stability of a Tetrameric Malate Dehydrogenase by Single Point Mutations at the Dimer-Dimer Interface.
J.Mol.Biol., 341, 2004

225399

数据于2024-09-25公开中

PDB statisticsPDBj update infoContact PDBjnumon