1SP6
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![BU of 1sp6 by Molmil](/molmil-images/mine/1sp6) | A DNA duplex containing a cholesterol adduct (alpha-anomer) | Descriptor: | 5'-D(*CP*CP*AP*CP*(HOL)P*GP*GP*AP*AP*C)-3', 5'-D(GP*TP*TP*CP*CP*GP*GP*TP*GP*G)-3' | Authors: | Gomez-Pinto, I, Cubero, E, Kalko, S.G, Monaco, V, van der Marel, G, van Boom, J.H, Orozco, M, Gonzalez, C. | Deposit date: | 2004-03-16 | Release date: | 2004-06-01 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Effect of bulky lesions on DNA: Solution structure of a DNA duplex containing a cholesterol adduct. J.Biol.Chem., 279, 2004
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1SSJ
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![BU of 1ssj by Molmil](/molmil-images/mine/1ssj) | A DNA DUPLEX CONTAINING A CHOLESTEROL ADDUCT (BETA-ANOMER) | Descriptor: | 5'-D(*CP*CP*AP*CP*(HOB)P*GP*GP*AP*AP*C)-3', 5'-D(GP*TP*TP*CP*CP*GP*GP*TP*GP*G)-3' | Authors: | Gomez-Pinto, I, Cubero, E, Kalko, S.G, Monaco, V, van der Marel, G, van Boom, J.H, Orozco, M, Gonzalez, C. | Deposit date: | 2004-03-24 | Release date: | 2004-06-01 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Effect of bulky lesions on DNA: Solution structure of a DNA duplex containing a cholesterol adduct. J.Biol.Chem., 279, 2004
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1J9N
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![BU of 1j9n by Molmil](/molmil-images/mine/1j9n) | Solution Structure of the Nucleopeptide [AC-LYS-TRP-LYS-HSE(p3*dGCATCG)-ALA]-[p5*dCGTAGC] | Descriptor: | 5'-D(*CP*GP*TP*AP*GP*C)-3', 5'-D(*GP*CP*TP*AP*CP*(PGN))-3', peptide ACE-LYS-TRP-LYS-HSE-ALA | Authors: | Gomez-Pinto, I, Marchan, V, Gago, F, Grandas, A, Gonzalez, C. | Deposit date: | 2001-05-28 | Release date: | 2003-01-21 | Last modified: | 2023-11-15 | Method: | SOLUTION NMR | Cite: | Solution structure and stability of tryptophan-containing nucleopeptide duplexes Chembiochem, 4, 2003
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2LYG
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![BU of 2lyg by Molmil](/molmil-images/mine/2lyg) | Fuc_TBA | Descriptor: | 2-hydroxyethyl 6-deoxy-beta-L-galactopyranoside, DNA (5'-D(P*GP*GP*TP*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)-3') | Authors: | Gomez-Pinto, I, Vengut-Climent, E, Lucas, R, Avio, A, Eritja, R, Gonzalez-Ibaez, C, Morales, J. | Deposit date: | 2012-09-18 | Release date: | 2014-01-29 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Carbohydrate-DNA interactions at G-quadruplexes: folding and stability changes by attaching sugars at the 5'-end. Chemistry, 19, 2013
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2N9H
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![BU of 2n9h by Molmil](/molmil-images/mine/2n9h) | Glucose as a nuclease mimic in DNA | Descriptor: | DNA (5'-D(*CP*TP*AP*GP*CP*(GL6)P*GP*TP*CP*AP*TP*C)-3'), DNA (5'-D(*GP*AP*TP*GP*AP*CP*TP*GP*CP*TP*AP*G)-3') | Authors: | Gomez-Pinto, I, Vengut-Climent, E, Lucas, R, Avino, A, Eritja, R, Gonzalez-Ibanez, C, Morales, J, Muro, A, Penalver, P, Fonseca-Guerra, C, Bickelhaupt, M. | Deposit date: | 2015-11-25 | Release date: | 2016-08-31 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | Glucose-Nucleobase Pseudo Base Pairs: Biomolecular Interactions within DNA. Angew.Chem.Int.Ed.Engl., 55, 2016
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2N9F
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![BU of 2n9f by Molmil](/molmil-images/mine/2n9f) | Glucose as non natural nucleobase | Descriptor: | DNA (5'-D(*CP*TP*AP*GP*CP*GP*GP*TP*CP*AP*TP*C)-3'), DNA (5'-D(*GP*AP*TP*GP*AP*CP*(4JA)P*GP*CP*TP*AP*G)-3') | Authors: | Gomez-Pinto, I, Vengut-Climent, E, Lucas, R, Avino, A, Eritja, R, Gonzalez-Ibanez, C, Morales, J, Penalver, P, Fonseca-Guerra, C, Bickelhaupt, M. | Deposit date: | 2015-11-20 | Release date: | 2016-08-31 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | Glucose-Nucleobase Pseudo Base Pairs: Biomolecular Interactions within DNA. Angew.Chem.Int.Ed.Engl., 55, 2016
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2HK4
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![BU of 2hk4 by Molmil](/molmil-images/mine/2hk4) | |
5MJX
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![BU of 5mjx by Molmil](/molmil-images/mine/5mjx) | 2'F-ANA/DNA Chimeric TBA Quadruplex structure | Descriptor: | DNA (5'-D(*GP*GP*(FT)P*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)-3') | Authors: | Lietard, J, Abou Assi, H, Gomez-Pinto, I, Gonzalez, C, Somoza, M.M, Damha, M.J. | Deposit date: | 2016-12-02 | Release date: | 2017-02-01 | Last modified: | 2024-06-19 | Method: | SOLUTION NMR | Cite: | Mapping the affinity landscape of Thrombin-binding aptamers on 2 F-ANA/DNA chimeric G-Quadruplex microarrays. Nucleic Acids Res., 45, 2017
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1IEK
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![BU of 1iek by Molmil](/molmil-images/mine/1iek) | SOLUTION STRUCTURE OF THE DNA DUPLEX D(CCACCGGAAC).(GTTCCGGTGG) WITH A CHIRAL ALKYL-PHOSPHONATE MOIETY (DIAESTEREOISOMER S) | Descriptor: | 5'-D(*CP*CP*AP*CP*CP*(OCT)GP*GP*AP*AP*C)-3', 5'-D(*GP*TP*TP*CP*CP*GP*GP*TP*GP*G)-3', N-OCTANE | Authors: | Soliva, R, Monaco, V, Gomez-Pinto, I, Meeuwenoord, N.J, van der Marel, G.A, van Boom, J.H, Gonzalez, C, Orozco, M. | Deposit date: | 2001-04-10 | Release date: | 2001-07-25 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Solution structure of a DNA duplex with a chiral alkyl phosphonate moiety. Nucleic Acids Res., 29, 2001
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1IEY
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![BU of 1iey by Molmil](/molmil-images/mine/1iey) | SOLUTION STRUCTURE OF THE DNA DUPLEX D(CCACCGGAAC).(GTTCCGGTGG) WITH A CHIRAL ALKYL-PHOSPHONATE MOIETY (DIAESTEREOISOMER R) | Descriptor: | 5'-D(*GP*TP*TP*CP*CP*GP*GP*TP*GP*G)-3', 5'-D(P*CP*CP*AP*CP*CP*(OCT)GP*GP*AP*AP*C)-3', N-OCTANE | Authors: | Soliva, R, Monaco, V, Gomez-Pinto, I, Meeuwenoord, N.J, van der Marel, G.A, van Boom, J.H, Gonzalez, C, Orozco, M. | Deposit date: | 2001-04-11 | Release date: | 2001-07-25 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Solution structure of a DNA duplex with a chiral alkyl phosphonate moiety. Nucleic Acids Res., 29, 2001
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2K8Z
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![BU of 2k8z by Molmil](/molmil-images/mine/2k8z) | Dimeric solution structure of the DNA loop d(TCGTTGCT) | Descriptor: | 5'-D(*TP*CP*GP*TP*TP*GP*CP*T)-3' | Authors: | Viladoms, J, Escaja, N, Frieden, M, Gomez-Pinto, I, Pedroso, E, Gonzalez, C. | Deposit date: | 2008-09-29 | Release date: | 2009-04-28 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Self-association of short DNA loops through minor groove C:G:G:C tetrads. Nucleic Acids Res., 37, 2009
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2KP3
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![BU of 2kp3 by Molmil](/molmil-images/mine/2kp3) | Structure of ANA-RNA hybrid duplex | Descriptor: | RNA (5'-R(*(GAO)P*(CAR)P*(UAR)P*(A5O)P*(UAR)P*(A5O)P*(A5O)P*(UAR)P*(GAO)P*(GAO))-3'), RNA (5'-R(*CP*CP*AP*UP*UP*AP*UP*AP*GP*C)-3') | Authors: | Gonzalez, C, Martn-Pintado, N, Watts, J, Gomez-Pinto, I, Dhama, M, Orozco, M, Schwartzentruber, J, Portella, G. | Deposit date: | 2009-10-06 | Release date: | 2010-02-09 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Differential stability of 2'F-ANA*RNA and ANA*RNA hybrid duplexes: roles of structure, pseudohydrogen bonding, hydration, ion uptake and flexibility. Nucleic Acids Res., 38, 2010
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2K90
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![BU of 2k90 by Molmil](/molmil-images/mine/2k90) | Dimeric solution structure of the DNA loop d(TGCTTCGT) | Descriptor: | 5'-D(*TP*GP*CP*TP*TP*CP*GP*T)-3' | Authors: | Viladoms, J, Escaja, N, Frieden, M, Gomez-Pinto, I, Pedroso, E, Gonzalez, C. | Deposit date: | 2008-09-29 | Release date: | 2009-04-28 | Last modified: | 2024-05-08 | Method: | SOLUTION NMR | Cite: | Self-association of short DNA loops through minor groove C:G:G:C tetrads. Nucleic Acids Res., 37, 2009
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2K97
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![BU of 2k97 by Molmil](/molmil-images/mine/2k97) | Dimeric solution structure of the cyclic octamer d(pCGCTCCGT) | Descriptor: | 5'-D(P*CP*GP*CP*TP*CP*CP*GP*T)-3' | Authors: | Viladoms, J, Escaja, N, Frieden, M, Gomez-Pinto, I, Pedroso, E, Gonzalez, C. | Deposit date: | 2008-09-30 | Release date: | 2009-04-28 | Last modified: | 2024-05-08 | Method: | SOLUTION NMR | Cite: | Self-association of short DNA loops through minor groove C:G:G:C tetrads. Nucleic Acids Res., 37, 2009
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2KP4
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![BU of 2kp4 by Molmil](/molmil-images/mine/2kp4) | Structure of 2'F-ANA/RNA hybrid duplex | Descriptor: | DNA (5'-D(*(GFL)P*(CFL)P*(TAF)P*(A5L)P*(TAF)P*(A5L)P*(A5L)P*(TAF)P*(GFL)P*(GFL))-3'), RNA (5'-R(*CP*CP*AP*UP*UP*AP*UP*AP*GP*C)-3') | Authors: | Gonzalez, C, Martin-Pintado, N, Watts, J, Gomez-Pinto, I, Dhama, M, Orozco, M, Schwartzentruber, J, Portella, G. | Deposit date: | 2009-10-06 | Release date: | 2010-02-09 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Differential stability of 2'F-ANA*RNA and ANA*RNA hybrid duplexes: roles of structure, pseudohydrogen bonding, hydration, ion uptake and flexibility. Nucleic Acids Res., 38, 2010
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