1IRJ
 
 | | Crystal Structure of the MRP14 complexed with CHAPS | | Descriptor: | 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, CALCIUM ION, Migration Inhibitory Factor-Related Protein 14 | | Authors: | Itou, H, Yao, M, Watanabe, N, Nishihira, J, Tanaka, I. | | Deposit date: | 2001-10-09 | | Release date: | 2002-02-27 | | Last modified: | 2023-12-27 | | Method: | X-RAY DIFFRACTION (2.1 Å) | | Cite: | The crystal structure of human MRP14 (S100A9), a Ca(2+)-dependent regulator protein in inflammatory process.
J.Mol.Biol., 316, 2002
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2YZQ
 | | Crystal structure of uncharacterized conserved protein from Pyrococcus horikoshii | | Descriptor: | Putative uncharacterized protein PH1780, S-ADENOSYLMETHIONINE | | Authors: | Kanagawa, M, Minami, Y, Watanabe, N, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | Deposit date: | 2007-05-06 | | Release date: | 2007-11-06 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (1.63 Å) | | Cite: | Crystal structure of uncharacterized conserved protein from Pyrococcus horikoshii
To be Published
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3RED
 | | 3.0 A structure of the Prunus mume hydroxynitrile lyase isozyme-1 | | Descriptor: | FLAVIN-ADENINE DINUCLEOTIDE, Hydroxynitrile lyase | | Authors: | Cielo, C.B.C, Yamane, T, Asano, Y, Watanabe, N, Suzuki, A, Fukuta, Y. | | Deposit date: | 2011-04-04 | | Release date: | 2012-06-20 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (3.03 Å) | | Cite: | Crystal Structure of a native FAD-dependent Hydroxynitrile Lyase derived from the Japanese apricot, Prunus mume
To be Published
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5B18
 | | Crystal Structure of a Darunavir Resistant HIV-1 Protease | | Descriptor: | ACETATE ION, CHLORIDE ION, Protease | | Authors: | Suzuki, K, Ode, H, Nakashima, M, Sugiura, W, Watanabe, N, Suzuki, A, Iwatani, Y. | | Deposit date: | 2015-11-30 | | Release date: | 2016-04-13 | | Last modified: | 2023-11-08 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Unique Flap Conformation in an HIV-1 Protease with High-Level Darunavir Resistance
Front Microbiol, 7, 2016
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1UB9
 | | Structure of the transcriptional regulator homologue protein from Pyrococcus horikoshii OT3 | | Descriptor: | Hypothetical protein PH1061 | | Authors: | Okada, U, Sakai, N, Tajika, Y, Yao, M, Watanabe, N, Tanaka, I. | | Deposit date: | 2003-04-03 | | Release date: | 2004-05-04 | | Last modified: | 2023-12-27 | | Method: | X-RAY DIFFRACTION (2.05 Å) | | Cite: | Structural analysis of the transcriptional regulator homolog protein from Pyrococcus horikoshii OT3.
Proteins, 63, 2006
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1V30
 | | Crystal Structure Of Uncharacterized Protein PH0828 From Pyrococcus horikoshii | | Descriptor: | 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Hypothetical UPF0131 protein PH0828 | | Authors: | Tajika, Y, Sakai, N, Yao, M, Watanabe, N, Tanaka, I. | | Deposit date: | 2003-10-21 | | Release date: | 2004-11-09 | | Last modified: | 2023-12-27 | | Method: | X-RAY DIFFRACTION (1.4 Å) | | Cite: | Crystal structure of hypothetical protein PH0828 from Pyrococcus horikoshii.
Proteins, 57, 2004
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1V4N
 | | Structure of 5'-deoxy-5'-methylthioadenosine phosphorylase homologue from Sulfolobus tokodaii | | Descriptor: | 271aa long hypothetical 5'-methylthioadenosine phosphorylase | | Authors: | Kitago, Y, Yasutake, Y, Sakai, N, Tsujimura, M, Yao, M, Watanabe, N, Kawarabayasi, Y, Tanaka, I. | | Deposit date: | 2003-11-14 | | Release date: | 2005-01-04 | | Last modified: | 2023-10-25 | | Method: | X-RAY DIFFRACTION (2.45 Å) | | Cite: | Crystal structure of Sulfolobus tokodaii MTAP
To be Published
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1WU7
 | | Crystal structure of histidyl-tRNA synthetase from Thermoplasma acidophilum | | Descriptor: | Histidyl-tRNA synthetase | | Authors: | Tanaka, Y, Sakai, N, Yao, M, Watanabe, N, Tamura, T, Tanaka, I. | | Deposit date: | 2004-12-01 | | Release date: | 2005-12-06 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.4 Å) | | Cite: | Crystal structure of histidyl-tRNA synthetase from Thermoplasma acidophilum
To be Published
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1VAJ
 | | Crystal Structure of Uncharacterized Protein PH0010 From Pyrococcus horikoshii | | Descriptor: | Hypothetical protein PH0010 | | Authors: | Tajika, Y, Sakai, N, Tamura, T, Yao, M, Watanabe, N, Tanaka, I. | | Deposit date: | 2004-02-17 | | Release date: | 2005-01-25 | | Last modified: | 2023-12-27 | | Method: | X-RAY DIFFRACTION (1.82 Å) | | Cite: | Crystal structure of PH0010 from Pyrococcus horikoshii, which is highly homologous to human AMMECR 1C-terminal region
Proteins, 58, 2005
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5Z98
 | | Crystal Structure of the Primate APOBEC3H Dimer mediated by RNA Duplex | | Descriptor: | Apolipoprotein B mRNA editing enzyme catalytic polypeptide-like protein 3H, RNA (5'-R(*AP*UP*AP*CP*CP*CP*GP*GP*CP*A)-3'), RNA (5'-R(P*CP*UP*GP*CP*CP*GP*GP*GP*UP*A)-3'), ... | | Authors: | Matsuoka, T, Nagae, T, Ode, H, Watanabe, N, Iwatani, Y. | | Deposit date: | 2018-02-02 | | Release date: | 2018-08-15 | | Last modified: | 2023-11-22 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | Structural basis of chimpanzee APOBEC3H dimerization stabilized by double-stranded RNA.
Nucleic Acids Res., 46, 2018
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1UDD
 | | TenA homologue protein from P.horikoshii OT3 | | Descriptor: | transcriptional regulator | | Authors: | Itou, H, Yao, M, Watanabe, N, Tanaka, I. | | Deposit date: | 2003-04-28 | | Release date: | 2004-06-01 | | Last modified: | 2023-12-27 | | Method: | X-RAY DIFFRACTION (2.15 Å) | | Cite: | Structure analysis of PH1161 protein, a transcriptional activator TenA homologue from the hyperthermophilic archaeon Pyrococcus horikoshii.
Acta Crystallogr.,Sect.D, 60, 2004
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1V43
 | | Crystal Structure of ATPase subunit of ABC Sugar Transporter | | Descriptor: | sugar-binding transport ATP-binding protein | | Authors: | Ose, T, Fujie, T, Yao, M, Watanabe, N, Tanaka, I. | | Deposit date: | 2003-11-08 | | Release date: | 2004-11-16 | | Last modified: | 2023-10-25 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | Crystal structure of the ATP-binding cassette of multisugar transporter from Pyrococcus horikoshii OT3
Proteins, 57, 2004
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1VCI
 | | Crystal structure of the ATP-binding cassette of multisugar transporter from Pyrococcus horikoshii OT3 complexed with ATP | | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, sugar-binding transport ATP-binding protein | | Authors: | Ose, T, Fujie, T, Yao, M, Watanabe, N, Tanaka, I. | | Deposit date: | 2004-03-08 | | Release date: | 2004-12-14 | | Last modified: | 2023-10-25 | | Method: | X-RAY DIFFRACTION (2.9 Å) | | Cite: | Crystal structure of the ATP-binding cassette of multisugar transporter from Pyrococcus horikoshii OT3
Proteins, 57, 2004
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1VDZ
 | | Crystal structure of A-type ATPase catalytic subunit A from Pyrococcus horikoshii OT3 | | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, A-type ATPase subunit A | | Authors: | Maegawa, Y, Morita, H, Yao, M, Watanabe, N, Tanaka, I. | | Deposit date: | 2004-03-26 | | Release date: | 2005-06-21 | | Last modified: | 2023-12-27 | | Method: | X-RAY DIFFRACTION (2.55 Å) | | Cite: | Crystal structure of A-type ATPase catalytic subunit A from Pyrococcus horikoshii OT3
To be Published
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1ULY
 | | Crystal structure analysis of the ArsR homologue DNA-binding protein from P. horikoshii OT3 | | Descriptor: | hypothetical protein PH1932 | | Authors: | Itou, H, Yao, M, Watanabe, N, Tanaka, I. | | Deposit date: | 2003-09-17 | | Release date: | 2004-10-19 | | Last modified: | 2023-12-27 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | Crystal structure of the PH1932 protein, a unique archaeal ArsR type winged-HTH transcription factor from Pyrococcus horikoshii OT3
Proteins, 70, 2008
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1WQA
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1WE5
 | | Crystal Structure of Alpha-Xylosidase from Escherichia coli | | Descriptor: | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Putative family 31 glucosidase yicI | | Authors: | Ose, T, Kitamura, M, Okuyama, M, Mori, H, Kimura, A, Watanabe, N, Yao, M, Tanaka, I. | | Deposit date: | 2004-05-24 | | Release date: | 2005-02-15 | | Last modified: | 2017-10-11 | | Method: | X-RAY DIFFRACTION (2.4 Å) | | Cite: | Crystal Structure of Alpha-Xylosidase from Escherichia coli
TO BE PUBLISHED
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3VL4
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3VMK
 | | 3-isopropylmalate dehydrogenase from Shewanella benthica DB21 MT-2 | | Descriptor: | 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CHLORIDE ION, ... | | Authors: | Nagae, T, Watanabe, N. | | Deposit date: | 2011-12-13 | | Release date: | 2012-02-29 | | Last modified: | 2023-11-08 | | Method: | X-RAY DIFFRACTION (1.48 Å) | | Cite: | Structural analysis of 3-isopropylmalate dehydrogenase from the obligate piezophile Shewanella benthica DB21MT-2 and the nonpiezophile Shewanella oneidensis MR-1
Acta Crystallogr.,Sect.F, 68, 2012
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3VL7
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3WVH
 | | Time-Resolved Crystal Structure of HindIII with 25sec soaking | | Descriptor: | DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3'), GLYCEROL, MANGANESE (II) ION, ... | | Authors: | Kawamura, T, Kobayashi, T, Watanabe, N. | | Deposit date: | 2014-05-21 | | Release date: | 2015-04-08 | | Last modified: | 2023-11-08 | | Method: | X-RAY DIFFRACTION (2.54 Å) | | Cite: | Analysis of the HindIII-catalyzed reaction by time-resolved crystallography
Acta Crystallogr.,Sect.D, 71, 2015
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3WVI
 | | Time-Resolved Crystal Structure of HindIII with 40 sec soaking | | Descriptor: | DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3'), GLYCEROL, MANGANESE (II) ION, ... | | Authors: | Kawamura, T, Kobayashi, T, Watanabe, N. | | Deposit date: | 2014-05-21 | | Release date: | 2015-04-08 | | Last modified: | 2023-11-08 | | Method: | X-RAY DIFFRACTION (2.55 Å) | | Cite: | Analysis of the HindIII-catalyzed reaction by time-resolved crystallography
Acta Crystallogr.,Sect.D, 71, 2015
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3WVP
 | | Time-Resolved Crystal Structure of HindIII with 60sec soaking | | Descriptor: | DNA (5'-D(*GP*CP*CP*A)-3'), DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3'), DNA (5'-D(P*AP*GP*CP*TP*TP*GP*GP*C)-3'), ... | | Authors: | Kawamura, T, Kobayashi, T, Watanabe, N. | | Deposit date: | 2014-06-02 | | Release date: | 2015-04-08 | | Last modified: | 2023-11-08 | | Method: | X-RAY DIFFRACTION (2.3 Å) | | Cite: | Analysis of the HindIII-catalyzed reaction by time-resolved crystallography
Acta Crystallogr.,Sect.D, 71, 2015
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3WVG
 | | Time-Resolved Crystal Structure of HindIII with 0sec soaking | | Descriptor: | DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3'), GLYCEROL, SODIUM ION, ... | | Authors: | Kawamura, T, Kobayashi, T, Watanabe, N. | | Deposit date: | 2014-05-21 | | Release date: | 2015-04-08 | | Last modified: | 2023-11-08 | | Method: | X-RAY DIFFRACTION (2.25 Å) | | Cite: | Analysis of the HindIII-catalyzed reaction by time-resolved crystallography
Acta Crystallogr.,Sect.D, 71, 2015
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3WVK
 | | Time-Resolved Crystal Structure of HindIII with 230sec soaking | | Descriptor: | DNA (5'-D(*GP*CP*CP*A)-3'), DNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3'), DNA (5'-D(P*AP*GP*CP*TP*TP*GP*GP*C)-3'), ... | | Authors: | Kawamura, T, Kobayashi, T, Watanabe, N. | | Deposit date: | 2014-05-22 | | Release date: | 2015-04-08 | | Last modified: | 2023-11-08 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | Analysis of the HindIII-catalyzed reaction by time-resolved crystallography
Acta Crystallogr.,Sect.D, 71, 2015
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