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8VBT
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BU of 8vbt by Molmil
Structure of the monofunctional Staphylococcus aureus PBP1 in its apo form
Descriptor: Penicillin-binding protein 1
Authors:Bon, C.G, Lee, J, Caveney, N.A, Strynadka, N.C.J.
Deposit date:2023-12-12
Release date:2024-05-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and kinetic analysis of the monofunctional Staphylococcus aureus PBP1.
J.Struct.Biol., 216, 2024
8VBU
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BU of 8vbu by Molmil
Structure of the monofunctional Staphylococcus aureus PBP1 in its beta-lactam (Oxacillin) inhibited form
Descriptor: (2R,4S)-5,5-dimethyl-2-[(1R)-1-{[(5-methyl-3-phenyl-1,2-oxazol-4-yl)carbonyl]amino}-2-oxoethyl]-1,3-thiazolidine-4-carb oxylic acid, Penicillin-binding protein 1
Authors:Bon, C.G, Lee, J, Caveney, N.A, Strynadka, N.C.J.
Deposit date:2023-12-12
Release date:2024-05-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and kinetic analysis of the monofunctional Staphylococcus aureus PBP1.
J.Struct.Biol., 216, 2024
1LKD
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BU of 1lkd by Molmil
CRYSTAL STRUCTURE OF 2,3-DIHYDROXYBIPHENYL 1,2-DIOXYGENASE (DHBD) COMPLEXED WITH 2',6'-DICL DIHYDROXYBIPHENYL (DHB)
Descriptor: 2',6'-DICHLORO-BIPHENYL-2,6-DIOL, BIPHENYL-2,3-DIOL 1,2-DIOXYGENASE, FE (II) ION, ...
Authors:Dai, S, Bolin, J.T.
Deposit date:2002-04-24
Release date:2002-11-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Identification and analysis of a bottleneck in PCB biodegradation
Nat.Struct.Biol., 9, 2002
1LGT
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BU of 1lgt by Molmil
CRYSTAL STRUCTURE OF 2,3-DIHYDROXYBIPHENYL 1,2-DIOXYGENASE (DHBD) COMPLEXED WITH 2'-Cl DIHYDROXYBIPHENYL (DHB)
Descriptor: 2'-CHLORO-BIPHENYL-2,3-DIOL, BIPHENYL-2,3-DIOL 1,2-DIOXYGENASE, FE (II) ION
Authors:Dai, S, Bolin, J.T.
Deposit date:2002-04-16
Release date:2002-11-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Identification and analysis of a bottleneck in PCB biodegradation
Nat.Struct.Biol., 12, 2002
2ZYL
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BU of 2zyl by Molmil
Crystal structure of 3-ketosteroid-9-alpha-hydroxylase (KshA) from M. tuberculosis
Descriptor: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, POSSIBLE OXIDOREDUCTASE, ...
Authors:D'Angelo, I, Capyk, J, Strynadka, N, Eltis, L.
Deposit date:2009-01-27
Release date:2009-03-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Characterization of 3-ketosteroid 9{alpha}-hydroxylase, a Rieske oxygenase in the cholesterol degradation pathway of Mycobacterium tuberculosis
J.Biol.Chem., 284, 2009
4LXG
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BU of 4lxg by Molmil
Crystal structure of DxnB2, a carbon - carbon bond hydrolase from Sphingomonas wittichii RW1
Descriptor: MCP Hydrolase, SULFATE ION
Authors:Bhowmik, S, Bolin, J.T.
Deposit date:2013-07-29
Release date:2013-09-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:The Lid Domain of the MCP Hydrolase DxnB2 Contributes to the Reactivity toward Recalcitrant PCB Metabolites.
Biochemistry, 52, 2013
4LYD
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BU of 4lyd by Molmil
Crystal structure of the S105A mutant of a C-C hydrolase, DxnB2 from Sphingomonas wittichii RW1
Descriptor: MCP Hydrolase
Authors:Ghosh, S, Bolin, J.T, Bhowmik, S.
Deposit date:2013-07-31
Release date:2013-09-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:The Lid Domain of the MCP Hydrolase DxnB2 Contributes to the Reactivity toward Recalcitrant PCB Metabolites.
Biochemistry, 52, 2013
4LXH
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BU of 4lxh by Molmil
Crystal Structure of the S105A mutant of a carbon-carbon bond hydrolase, DxnB2 from Sphingomonas wittichii RW1, in complex with 3-Cl HOPDA
Descriptor: (2Z,4E)-3-chloro-2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid, MCP Hydrolase, SODIUM ION
Authors:Bhowmik, S, Bolin, J.T.
Deposit date:2013-07-29
Release date:2013-09-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:The Lid Domain of the MCP Hydrolase DxnB2 Contributes to the Reactivity toward Recalcitrant PCB Metabolites.
Biochemistry, 52, 2013
4LYE
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BU of 4lye by Molmil
Crystal structure of the S105A mutant of a C-C hydrolase, DxnB2 from Sphingomonas wittichii RW1, in complex with substrate HOPDA
Descriptor: (3E)-2,6-DIOXO-6-PHENYLHEX-3-ENOATE, MCP Hydrolase
Authors:Ghosh, S, Bolin, J.T.
Deposit date:2013-07-31
Release date:2013-10-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:A substrate-assisted mechanism of nucleophile activation in a ser-his-asp containing C-C bond hydrolase.
Biochemistry, 52, 2013
4LXI
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BU of 4lxi by Molmil
Crystal Structure of the S105A mutant of a carbon-carbon bond hydrolase, DxnB2 from Sphingomonas wittichii RW1, in complex with 5,8-diF HOPDA
Descriptor: (3E,5R)-5-fluoro-6-(2-fluorophenyl)-2,6-dioxohex-3-enoic acid, MCP Hydrolase, SODIUM ION
Authors:Bhowmik, S, Bolin, J.T.
Deposit date:2013-07-29
Release date:2013-10-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:A substrate-assisted mechanism of nucleophile activation in a ser-his-asp containing C-C bond hydrolase.
Biochemistry, 52, 2013
6C3D
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BU of 6c3d by Molmil
O2-, PLP-dependent L-arginine hydroxylase RohP quinonoid II complex
Descriptor: (2E,3E)-5-carbamimidamido-2-{[(Z)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4(1H)-ylidene}methyl]imino}pent-3-enoic acid, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Hedges, J.B, Ryan, K.S.
Deposit date:2018-01-09
Release date:2018-03-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Snapshots of the Catalytic Cycle of an O2, Pyridoxal Phosphate-Dependent Hydroxylase.
ACS Chem. Biol., 13, 2018
6C3K
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BU of 6c3k by Molmil
Apo crystal structure of S. aureus penicillin binding protein 4 (PBP4) mutant (E183A, F241R)
Descriptor: CHLORIDE ION, Penicillin-binding protein 4, SODIUM ION, ...
Authors:Alexander, J.A.N, Strynadka, N.C.J.
Deposit date:2018-01-10
Release date:2018-11-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and kinetic analyses of penicillin-binding protein 4 (PBP4)-mediated antibiotic resistance inStaphylococcus aureus.
J. Biol. Chem., 293, 2018
6C3A
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BU of 6c3a by Molmil
O2-, PLP-dependent L-arginine hydroxylase RohP 4-hydroxy-2-ketoarginine complex
Descriptor: (4S)-5-carbamimidamido-4-hydroxy-2-oxopentanoic acid, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Hedges, J.B, Ryan, K.S.
Deposit date:2018-01-09
Release date:2018-03-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Snapshots of the Catalytic Cycle of an O2, Pyridoxal Phosphate-Dependent Hydroxylase.
ACS Chem. Biol., 13, 2018
6C3C
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BU of 6c3c by Molmil
PLP-dependent L-arginine hydroxylase RohP quinonoid I complex
Descriptor: (2E)-5-carbamimidamido-2-{[(Z)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4(1H)-ylidene}methyl]imino}pentanoic acid, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Hedges, J.B, Ryan, K.S.
Deposit date:2018-01-09
Release date:2018-03-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Snapshots of the Catalytic Cycle of an O2, Pyridoxal Phosphate-Dependent Hydroxylase.
ACS Chem. Biol., 13, 2018
6C3B
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BU of 6c3b by Molmil
O2-, PLP-Dependent L-Arginine Hydroxylase RohP Holoenzyme
Descriptor: 1,2-ETHANEDIOL, TRIETHYLENE GLYCOL, Uncharacterized protein
Authors:Hedges, J.B, Ryan, K.S.
Deposit date:2018-01-09
Release date:2018-03-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Snapshots of the Catalytic Cycle of an O2, Pyridoxal Phosphate-Dependent Hydroxylase.
ACS Chem. Biol., 13, 2018
6C39
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BU of 6c39 by Molmil
Apo crystal structure of wild-type S. aureus penicillin binding protein 4 (PBP4)
Descriptor: SODIUM ION, SULFATE ION, Serine-type D-Ala-D-Ala carboxypeptidase, ...
Authors:Alexander, J.A.N, Strynadka, N.C.J.
Deposit date:2018-01-09
Release date:2018-11-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structural and kinetic analyses of penicillin-binding protein 4 (PBP4)-mediated antibiotic resistance inStaphylococcus aureus.
J. Biol. Chem., 293, 2018
2PUH
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BU of 2puh by Molmil
Crystal Structure of the S112A mutant of a C-C hydrolase, BphD from Burkholderia xenovorans LB400, in complex with its substrate HOPDA
Descriptor: (3E)-2,6-DIOXO-6-PHENYLHEX-3-ENOATE, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, MALONATE ION, ...
Authors:Bhowmik, S, Bolin, J.T.
Deposit date:2007-05-09
Release date:2007-05-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:The Tautomeric Half-reaction of BphD, a C-C Bond Hydrolase: KINETIC AND STRUCTURAL EVIDENCE SUPPORTING A KEY ROLE FOR HISTIDINE 265 OF THE CATALYTIC TRIAD.
J.Biol.Chem., 282, 2007
2PU7
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BU of 2pu7 by Molmil
Crystal Structure of S112A/H265A double mutant of a C-C hydrolase, BphD, from Burkholderia xenovorans LB400
Descriptor: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, MALONATE ION, SODIUM ION
Authors:Bhowmik, S, Bolin, J.T.
Deposit date:2007-05-08
Release date:2007-05-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:The Tautomeric Half-reaction of BphD, a C-C Bond Hydrolase: KINETIC AND STRUCTURAL EVIDENCE SUPPORTING A KEY ROLE FOR HISTIDINE 265 OF THE CATALYTIC TRIAD.
J.Biol.Chem., 282, 2007
2RI6
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BU of 2ri6 by Molmil
Crystal Structure of S112A mutant of a C-C hydrolase, BphD from Burkholderia xenovorans LB400
Descriptor: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, MALONATE ION, SODIUM ION
Authors:Bhowmik, S, Bolin, J.T.
Deposit date:2007-10-10
Release date:2007-11-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:The tautomeric half-reaction of BphD, a C-C bond hydrolase. Kinetic and structural evidence supporting a key role for histidine 265 of the catalytic triad.
J.Biol.Chem., 282, 2007
2PUJ
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BU of 2puj by Molmil
Crystal Structure of the S112A/H265A double mutant of a C-C hydrolase, BphD from Burkholderia xenovorans LB400, in complex with its substrate HOPDA
Descriptor: (2E,4E)-2-HYDROXY-6-OXO-6-PHENYLHEXA-2,4-DIENOIC ACID, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, MALONATE ION, ...
Authors:Bhowmik, S, Bolin, J.T.
Deposit date:2007-05-09
Release date:2007-05-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:The Tautomeric Half-reaction of BphD, a C-C Bond Hydrolase: KINETIC AND STRUCTURAL EVIDENCE SUPPORTING A KEY ROLE FOR HISTIDINE 265 OF THE CATALYTIC TRIAD.
J.Biol.Chem., 282, 2007
2PU5
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BU of 2pu5 by Molmil
Crystal Structure of a C-C bond hydrolase, BphD, from Burkholderia xenovorans LB400
Descriptor: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, MALONATE ION
Authors:Bhowmik, S, Bolin, J.T.
Deposit date:2007-05-08
Release date:2007-05-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Tautomeric Half-reaction of BphD, a C-C Bond Hydrolase: KINETIC AND STRUCTURAL EVIDENCE SUPPORTING A KEY ROLE FOR HISTIDINE 265 OF THE CATALYTIC TRIAD.
J.Biol.Chem., 282, 2007
2E86
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BU of 2e86 by Molmil
Azide bound to copper containing nitrite reductase from A. faecalis S-6
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, AZIDE ION, ...
Authors:Tocheva, E.I, Murphy, M.E.P.
Deposit date:2007-01-19
Release date:2008-01-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Conserved Active Site Residues Limit Inhibition of a Copper-Containing Nitrite Reductase by Small Molecules.
Biochemistry, 47, 2008
2EI2
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BU of 2ei2 by Molmil
Crystal Structure Analysis of the 1,2-dihydroxynaphthalene dioxygenase from Pseudomonas sp. stain C18
Descriptor: 1,2-dihydroxynaphthalene dioxygenase, FE (II) ION, GLYCEROL, ...
Authors:Neau, D.B, Kelker, M.S, Colbert, C.L, Bolin, J.T.
Deposit date:2007-03-10
Release date:2008-02-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structural explanation for success and failure in the enzymatic ring-cleavage of 3,4 dihydroxybiphenyl and related PCB metabolites
To be Published
2EI1
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BU of 2ei1 by Molmil
Anaerobic Crystal Structure Analysis of the 1,2-dihydroxynaphthalene dioxygeanse of Pseudomonas sp. strain C18 complexes to 1,2-dihydroxynaphthalene
Descriptor: 1,2-dihydroxynaphthalene dioxygenase, FE (II) ION, GLYCEROL, ...
Authors:Neau, D.B, Kelker, M.S, Colbert, C.L, Bolin, J.T.
Deposit date:2007-03-10
Release date:2008-02-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structural explanation for success and failure in the enzymatic ring-cleavage of 3,4 dihydroxybiphenyl and related PCB metabolites.
To be Published
2EHZ
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BU of 2ehz by Molmil
Anaerobic Crystal Structure Analysis of 1,2-dihydroxynaphthalene dioxygenase from Pseudomonas sp. strain C18 complexed with 4-methylcatechol
Descriptor: 1,2-ETHANEDIOL, 1,2-dihydroxynaphthalene dioxygenase, 4-METHYLCATECHOL, ...
Authors:Neau, D.B, Kelker, M.S, Colbert, C.L, Bolin, J.T.
Deposit date:2007-03-10
Release date:2008-02-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural explanation for success and failure in the enzymatic ring-cleavage of 3,4 dihydroxybiphenyl and related PCB metabolites
To be Published

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