2ZBW
| Crystal structure of thioredoxin reductase-like protein from Thermus thermophilus HB8 | Descriptor: | FLAVIN-ADENINE DINUCLEOTIDE, Thioredoxin reductase | Authors: | Ebihara, A, Manzoku, M, Fujimoto, Y, Kitamura, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2007-10-30 | Release date: | 2007-11-13 | Last modified: | 2017-10-11 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Crystal structure of thioredoxin reductase-like protein from Thermus thermophilus HB8 To be Published
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2ZCA
| Crystal Structure of TTHB189, a CRISPR-associated protein, Cse2 family from Thermus thermophilus HB8 | Descriptor: | Putative uncharacterized protein TTHB189 | Authors: | Agari, Y, Shinkai, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2007-11-08 | Release date: | 2008-10-07 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | X-ray crystal structure of a CRISPR-associated protein, Cse2, from Thermus thermophilus HB8 Proteins, 73, 2008
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3AJE
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3AOU
| Structure of the Na+ unbound rotor ring modified with N,N f-Dicyclohexylcarbodiimide of the Na+-transporting V-ATPase | Descriptor: | DICYCLOHEXYLUREA, UNDECYL-MALTOSIDE, V-type sodium ATPase subunit K | Authors: | Mizutani, K, Yamamoto, M, Yamato, I, Kakinuma, Y, Shirouzu, M, Yokoyama, S, Iwata, S, Murata, T. | Deposit date: | 2010-10-06 | Release date: | 2011-08-17 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (3.14 Å) | Cite: | Structure of the rotor ring modified with N,N'-dicyclohexylcarbodiimide of the Na+-transporting vacuolar ATPase. Proc.Natl.Acad.Sci.USA, 108, 2011
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2ZKX
| Crystal structure of human Cu-Zn superoxide dismutase mutant G85R in space group I212121 | Descriptor: | COPPER (I) ION, Superoxide dismutase [Cu-Zn], ZINC ION | Authors: | Yoshikawa, S, Kukimoto-Niino, M, Ito, K, Chen, L, Fu, Z.Q, Chrzas, J, Wang, B.C, Shirouzu, M, Urushitani, M, Takahashi, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2008-03-31 | Release date: | 2009-03-24 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.72 Å) | Cite: | Crystal structure of human Cu-Zn superoxide dismutase mutant G85R in space group I212121 To be Published
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2ZUE
| Crystal structure of Pyrococcus horikoshii arginyl-tRNA synthetase complexed with tRNA(Arg) and an ATP analog (ANP) | Descriptor: | Arginyl-tRNA synthetase, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... | Authors: | Konno, M, Sumida, T, Uchikawa, E, Mori, Y, Yanagisawa, T, Sekine, S, Yokoyama, S. | Deposit date: | 2008-10-16 | Release date: | 2009-08-18 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Modeling of tRNA-assisted mechanism of Arg activation based on a structure of Arg-tRNA synthetase, tRNA, and an ATP analog (ANP) Febs J., 276, 2009
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2Z1M
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2ZJB
| Crystal structure of the human Dmc1-M200V polymorphic variant | Descriptor: | Meiotic recombination protein DMC1/LIM15 homolog | Authors: | Hikiba, J, Hirota, K, Kagawa, W, Ikawa, S, Kinebuchi, T, Sakane, I, Takizawa, Y, Yokoyama, S, Mandon-Pepin, B, Nicolas, A, Shibata, T, Ohta, K, Kurumizaka, H. | Deposit date: | 2008-03-02 | Release date: | 2008-08-12 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (3.5 Å) | Cite: | Structural and functional analyses of the DMC1-M200V polymorphism found in the human population Nucleic Acids Res., 36, 2008
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2ZDQ
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2ZBT
| Crystal structure of pyridoxine biosynthesis protein from Thermus thermophilus HB8 | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, Pyridoxal biosynthesis lyase pdxS | Authors: | Manzoku, M, Ebihara, A, Fujimoto, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2007-10-29 | Release date: | 2007-12-18 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Crystal structure of pyridoxine biosynthesis protein from Thermus thermophilus HB8 To be Published
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2ZCW
| Crystal Structure of TTHA1359, a Transcriptional Regulator, CRP/FNR family from Thermus thermophilus HB8 | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, Transcriptional regulator, FNR/CRP family | Authors: | Agari, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2007-11-13 | Release date: | 2007-12-04 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Global gene expression mediated by Thermus thermophilus SdrP, a CRP/FNR family transcriptional regulator Mol.Microbiol., 70, 2008
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1V6F
| Solution Structure of Glia Maturation Factor-beta from Mus Musculus | Descriptor: | glia maturation factor, beta | Authors: | Goroncy, A.K, Kigawa, T, Koshiba, S, Tomizawa, T, Kobayashi, N, Tochio, N, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2003-11-29 | Release date: | 2004-05-29 | Last modified: | 2023-12-27 | Method: | SOLUTION NMR | Cite: | NMR solution structures of actin depolymerizing factor homology domains. Protein Sci., 18, 2009
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1WFS
| Solution Structure of Glia Maturation Factor-gamma from Mus Musculus | Descriptor: | Glia maturation factor gamma | Authors: | Goroncy, A.K, Kigawa, T, Koshiba, S, Kobayashi, N, Tochio, N, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-05-26 | Release date: | 2004-11-26 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | NMR solution structures of actin depolymerizing factor homology domains. Protein Sci., 18, 2009
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2Z4S
| Crystal structure of domain III from the Thermotoga maritima replication initiation protein DnaA | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, Chromosomal replication initiator protein dnaA, MAGNESIUM ION | Authors: | Fujikawa, N, Ozaki, S, Kagawa, W, Park, S.-Y, Katayama, T, Kurumizaka, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2007-06-25 | Release date: | 2008-02-19 | Last modified: | 2024-08-14 | Method: | X-RAY DIFFRACTION (3 Å) | Cite: | A Common Mechanism for the ATP-DnaA-dependent Formation of Open Complexes at the Replication Origin. J.Biol.Chem., 283, 2008
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1WV9
| Crystal Structure of Rhodanese Homolog TT1651 from an Extremely Thermophilic Bacterium Thermus thermophilus HB8 | Descriptor: | Rhodanese Homolog TT1651 | Authors: | Mizohata, E, Hattori, M, Tatsuguchi, A, Terada, T, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-12-12 | Release date: | 2005-06-19 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Crystal structure of the single-domain rhodanese homologue TTHA0613 from Thermus thermophilus HB8 Proteins, 64, 2006
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2ZDH
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2ZAU
| Crystal structure of an N-terminally truncated selenophosphate synthetase from Aquifex aeolicus | Descriptor: | PHOSPHATE ION, Selenide, water dikinase | Authors: | Sekine, S, Matsumoto, E, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2007-10-10 | Release date: | 2008-06-17 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Structure of an N-terminally truncated selenophosphate synthetase from Aquifex aeolicus Acta Crystallogr.,Sect.F, 64, 2008
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2ZKW
| Crystal structure of human Cu-Zn superoxide dismutase mutant G85R in space group P21 | Descriptor: | COPPER (I) ION, Superoxide dismutase [Cu-Zn], ZINC ION | Authors: | Yoshikawa, S, Kukimoto-Niino, M, Ito, K, Chen, L, Fu, Z.Q, Chrzas, J, Wang, B.C, Shirouzu, M, Urushitani, M, Takahashi, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2008-03-31 | Release date: | 2009-03-24 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Crystal structure of human Cu-Zn superoxide dismutase mutant G85R in space group P21 To be Published
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2ZUF
| Crystal structure of Pyrococcus horikoshii arginyl-tRNA synthetase complexed with tRNA(Arg) | Descriptor: | Arginyl-tRNA synthetase, tRNA-Arg | Authors: | Konno, M, Sumida, T, Uchikawa, E, Mori, Y, Yanagisawa, T, Sekine, S, Yokoyama, S. | Deposit date: | 2008-10-16 | Release date: | 2009-08-18 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Modeling of tRNA-assisted mechanism of Arg activation based on a structure of Arg-tRNA synthetase, tRNA, and an ATP analog (ANP) Febs J., 276, 2009
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1WGU
| Solution Structure of the C-terminal Phosphotyrosine Interaction Domain of APBB2 from Mouse | Descriptor: | amyloid beta (A4) precursor protein-binding, family B, member 2 | Authors: | Li, H, Hayashi, F, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-05-28 | Release date: | 2004-11-28 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | Structure of the C-terminal phosphotyrosine interaction domain of Fe65L1 complexed with the cytoplasmic tail of amyloid precursor protein reveals a novel peptide binding mode J.Biol.Chem., 283, 2008
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3CM0
| Crystal structure of adenylate kinase from Thermus thermophilus HB8 | Descriptor: | Adenylate kinase | Authors: | Nakagawa, N, Kondo, N, Masui, R, Matsuda, Z, Iwamoto, I, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2008-03-20 | Release date: | 2008-09-23 | Last modified: | 2024-08-14 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Crystal structure of adenylate kinase from Thermus thermophilus HB8. To be Published
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1ULH
| A short peptide insertion crucial for angiostatic activity of human tryptophanyl-tRNA synthetase | Descriptor: | Tryptophanyl-tRNA synthetase | Authors: | Kise, Y, Sengoku, T, Ishii, R, Yokoyama, S, Park, S.G, Lee, S.W, Kim, S, Nureki, O, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2003-09-12 | Release date: | 2004-02-03 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2.31 Å) | Cite: | A short peptide insertion crucial for angiostatic activity of human tryptophanyl-tRNA synthetase Nat.Struct.Mol.Biol., 11, 2004
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3CPQ
| Crystal Structure of L30e a ribosomal protein from Methanocaldococcus jannaschii DSM2661 (MJ1044) | Descriptor: | 50S ribosomal protein L30e | Authors: | Jeyakanthan, J, Sarani, R, Mridula, P, Sekar, K, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2008-04-01 | Release date: | 2009-04-07 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Crystal Structure of L30e a ribosomal protein from Methanocaldococcus jannaschii DSM2661 (MJ1044) To be Published
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1X56
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1WWY
| Solution structure of the DUF1000 domain of a thioredoxin-like protein 1 | Descriptor: | Thioredoxin-like protein 1 | Authors: | Goroncy, A.K, Kigawa, T, Koshiba, S, Kobayashi, N, Tochio, N, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2005-01-18 | Release date: | 2005-07-18 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | Solution structure of the C-terminal DUF1000 domain of the human thioredoxin-like 1 protein. Proteins, 78, 2010
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