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6ORA
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BU of 6ora by Molmil
An Unexpected Intermediate in the Reaction Catalyzed by Quinolinate Synthase
分子名称: (2~{Z})-2-(1-oxidanyl-3-oxidanylidene-propyl)iminobutanedioic acid, 2-hydroxy-N-[(1S)-1-hydroxy-3-oxopropyl]-L-aspartic acid, ACETATE ION, ...
著者Esakova, O.A, Grove, T.L, Silakov, A, Yennawar, N.H, Booker, S.J.
登録日2019-04-29
公開日2019-08-21
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献An Unexpected Species Determined by X-ray Crystallography that May Represent an Intermediate in the Reaction Catalyzed by Quinolinate Synthase.
J.Am.Chem.Soc., 141, 2019
6NSO
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BU of 6nso by Molmil
An Unexpected Intermediate in the Reaction Catalyzed by Quinolinate Synthase
分子名称: 1,3-DIHYDROXYACETONEPHOSPHATE, IRON/SULFUR CLUSTER, Quinolinate synthase A
著者Esakova, O.A, Grove, T.L, Silakov, A, Yennawar, N.H, Booker, S.J.
登録日2019-01-25
公開日2019-10-16
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献An Unexpected Species Determined by X-ray Crystallography that May Represent an Intermediate in the Reaction Catalyzed by Quinolinate Synthase.
J.Am.Chem.Soc., 141, 2019
6NSU
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BU of 6nsu by Molmil
Crystallographic Capture of Quinolinate Synthase (NadA) from Pyrococcus horikoshii in its Substrates and Product-Bound States
分子名称: DIDEHYDROASPARTATE, IRON/SULFUR CLUSTER, Quinolinate synthase A
著者Esakova, O.A, Grove, T.L, Silakov, A, Yennawar, N.H, Booker, S.J.
登録日2019-01-25
公開日2019-08-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献An Unexpected Species Determined by X-ray Crystallography that May Represent an Intermediate in the Reaction Catalyzed by Quinolinate Synthase.
J.Am.Chem.Soc., 141, 2019
4PL2
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BU of 4pl2 by Molmil
X-ray crystal structure of C118A RlmN from Escherichia coli
分子名称: Dual-specificity RNA methyltransferase RlmN, IRON/SULFUR CLUSTER
著者Boal, A.K, Rosenzweig, A.C.
登録日2014-05-15
公開日2014-05-28
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Characterization of a cross-linked protein-nucleic acid substrate radical in the reaction catalyzed by RlmN.
J.Am.Chem.Soc., 136, 2014
4PL1
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BU of 4pl1 by Molmil
X-ray crystal structure of C118A RlmN from Escherichia coli with S-adenosylmethionine
分子名称: Dual-specificity RNA methyltransferase RlmN, IRON/SULFUR CLUSTER, S-ADENOSYLMETHIONINE
著者Boal, A.K, Rosenzweig, A.C.
登録日2014-05-15
公開日2014-05-28
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.58 Å)
主引用文献Characterization of a cross-linked protein-nucleic acid substrate radical in the reaction catalyzed by RlmN.
J.Am.Chem.Soc., 136, 2014
6XIG
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BU of 6xig by Molmil
X-ray crystal structure of MqnE from Pedobacter heparinus
分子名称: Aminodeoxyfutalosine synthase, D(-)-TARTARIC ACID, IRON/SULFUR CLUSTER
著者Grove, T.L, Bonanno, J.B, Almo, S.C.
登録日2020-06-19
公開日2020-07-15
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Narrow-Spectrum Antibiotic Targeting of the Radical SAM Enzyme MqnE in Menaquinone Biosynthesis.
Biochemistry, 59, 2020
6XI9
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BU of 6xi9 by Molmil
X-ray crystal structure of MqnE from Pedobacter heparinus in complex with aminofutalosine and methionine
分子名称: 9-[7-(3-carboxyphenyl)-5,6-dideoxy-beta-D-ribo-heptodialdo-1,4-furanosyl]-9H-purin-6-amine, Aminodeoxyfutalosine synthase, CHLORIDE ION, ...
著者Grove, T.L, Bonanno, J.B, Almo, S.C.
登録日2020-06-19
公開日2020-07-15
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Narrow-Spectrum Antibiotic Targeting of the Radical SAM Enzyme MqnE in Menaquinone Biosynthesis.
Biochemistry, 59, 2020
6EBO
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BU of 6ebo by Molmil
Crystal Structure of the Class Ie Ribonucleotide Reductase Beta Subunit from Aerococcus urinae in Unactivated Form
分子名称: CALCIUM ION, GLYCEROL, Ribonucleoside-diphosphate reductase, ...
著者Palowitch, G.M, Alapati, R.B, Boal, A.K.
登録日2018-08-06
公開日2018-09-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Metal-free class Ie ribonucleotide reductase from pathogens initiates catalysis with a tyrosine-derived dihydroxyphenylalanine radical.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6EBQ
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BU of 6ebq by Molmil
Crystal Structure of the Flavoprotein NrdI from Aerococcus urinae in Oxidized Form
分子名称: FLAVIN MONONUCLEOTIDE, Protein NrdI
著者Palowitch, G.M, Alapati, R.B, Boal, A.K.
登録日2018-08-06
公開日2018-09-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Metal-free class Ie ribonucleotide reductase from pathogens initiates catalysis with a tyrosine-derived dihydroxyphenylalanine radical.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4ZK6
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BU of 4zk6 by Molmil
Crystallographic Capture of Quinolinate Synthase (NadA) from Pyrococcus horikoshii in its Substrates and Product-Bound States
分子名称: ACETATE ION, CHLORIDE ION, IRON/SULFUR CLUSTER, ...
著者Esakova, O.A, Grove, T.L, Saunders, A.H, Yennawar, N.H, Booker, S.J.
登録日2015-04-29
公開日2016-06-29
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.895 Å)
主引用文献Structure of Quinolinate Synthase from Pyrococcus horikoshii in the Presence of Its Product, Quinolinic Acid.
J.Am.Chem.Soc., 138, 2016
6EBZ
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BU of 6ebz by Molmil
Crystal Structure of the Class Ie Ribonucleotide Reductase Beta Subunit from Aerococcus urinae in Activated Form with Thiocyanate Bound
分子名称: CALCIUM ION, GLYCEROL, Ribonucleoside-diphosphate reductase, ...
著者Palowitch, G.M, Boal, A.K.
登録日2018-08-07
公開日2018-09-19
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Metal-free class Ie ribonucleotide reductase from pathogens initiates catalysis with a tyrosine-derived dihydroxyphenylalanine radical.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6EBP
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BU of 6ebp by Molmil
Crystal Structure of the Class Ie Ribonucleotide Reductase Beta Subunit from Aerococcus urinae in Activated Form
分子名称: CALCIUM ION, GLYCEROL, Ribonucleoside-diphosphate reductase, ...
著者Palowitch, G.M, Boal, A.K.
登録日2018-08-06
公開日2018-09-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Metal-free class Ie ribonucleotide reductase from pathogens initiates catalysis with a tyrosine-derived dihydroxyphenylalanine radical.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6OR8
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BU of 6or8 by Molmil
An Unexpected Intermediate in the Reaction Catalyzed by Quinolinate Synthase
分子名称: 2-hydroxy-N-[(1S)-1-hydroxy-3-oxopropyl]-L-aspartic acid, IRON/SULFUR CLUSTER, PHOSPHATE ION, ...
著者Esakova, O.A, Grove, T.L, Yennawar, N.H, Booker, S.J.
登録日2019-04-29
公開日2019-10-16
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献An Unexpected Species Determined by X-ray Crystallography that May Represent an Intermediate in the Reaction Catalyzed by Quinolinate Synthase.
J.Am.Chem.Soc., 141, 2019
6ALN
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BU of 6aln by Molmil
VioC L-arginine hydroxylase bound to Fe(II), 3S-hydroxy-L-arginine, and 2OG
分子名称: (2S,3S)-3-HYDROXYARGININE, 2-OXOGLUTARIC ACID, Alpha-ketoglutarate-dependent L-arginine hydroxylase, ...
著者Mitchell, A.J, Dunham, N.P, Boal, A.K.
登録日2017-08-08
公開日2017-09-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Visualizing the Reaction Cycle in an Iron(II)- and 2-(Oxo)-glutarate-Dependent Hydroxylase.
J. Am. Chem. Soc., 139, 2017
6ALO
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BU of 6alo by Molmil
VioC L-arginine hydroxylase bound to Fe(II), L-arginine, and a peroxysuccinate intermediate
分子名称: 4-peroxy-4-oxobutanoic acid, ARGININE, Alpha-ketoglutarate-dependent L-arginine hydroxylase, ...
著者Dunham, N.P, Mitchell, A.J, Boal, A.K.
登録日2017-08-08
公開日2017-09-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Visualizing the Reaction Cycle in an Iron(II)- and 2-(Oxo)-glutarate-Dependent Hydroxylase.
J. Am. Chem. Soc., 139, 2017
6ALM
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BU of 6alm by Molmil
VioC L-arginine hydroxylase bound to Fe(II), L-arginine, and 2-OXO-GLUTARIC ACID
分子名称: 2-OXOGLUTARIC ACID, ARGININE, Alpha-ketoglutarate-dependent L-arginine hydroxylase, ...
著者Dunham, N.P, Mitchell, A.J, Boal, A.K.
登録日2017-08-08
公開日2017-09-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Visualizing the Reaction Cycle in an Iron(II)- and 2-(Oxo)-glutarate-Dependent Hydroxylase.
J. Am. Chem. Soc., 139, 2017
6ALQ
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BU of 6alq by Molmil
VioC L-arginine hydroxylase bound to Fe(II), L-arginine, and succinate
分子名称: ARGININE, Alpha-ketoglutarate-dependent L-arginine hydroxylase, FE (II) ION, ...
著者Dunham, N.P, Mitchell, A.J, Boal, A.K.
登録日2017-08-08
公開日2017-09-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Visualizing the Reaction Cycle in an Iron(II)- and 2-(Oxo)-glutarate-Dependent Hydroxylase.
J. Am. Chem. Soc., 139, 2017
6ALR
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BU of 6alr by Molmil
VioC L-arginine hydroxylase bound to the vanadyl ion, L-arginine, and succinate
分子名称: ARGININE, Alpha-ketoglutarate-dependent L-arginine hydroxylase, SUCCINIC ACID, ...
著者Mitchell, A.J, Dunham, N.P, Bergman, J.A, Boal, A.K.
登録日2017-08-08
公開日2017-09-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Visualizing the Reaction Cycle in an Iron(II)- and 2-(Oxo)-glutarate-Dependent Hydroxylase.
J. Am. Chem. Soc., 139, 2017
6ALP
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BU of 6alp by Molmil
VioC L-arginine hydroxylase bound to Fe(II), 3S-hydroxy-L-arginine, and succinate
分子名称: (2S,3S)-3-HYDROXYARGININE, Alpha-ketoglutarate-dependent L-arginine hydroxylase, FE (II) ION, ...
著者Mitchell, A.J, Dunham, N.P, Boal, A.K.
登録日2017-08-08
公開日2017-09-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Visualizing the Reaction Cycle in an Iron(II)- and 2-(Oxo)-glutarate-Dependent Hydroxylase.
J. Am. Chem. Soc., 139, 2017
6CWO
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BU of 6cwo by Molmil
X-ray crystal structure of Flavobacterium johnsoniae dimanganese(II) ribonucleotide reductase beta subunit (aerobic)
分子名称: MAGNESIUM ION, MANGANESE (II) ION, Ribonucleotide reductase
著者Maggiolo, A.O, Rose, H.R, Boal, A.K.
登録日2018-03-30
公開日2018-06-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Structural Basis for Superoxide Activation of Flavobacterium johnsoniae Class I Ribonucleotide Reductase and for Radical Initiation by Its Dimanganese Cofactor.
Biochemistry, 57, 2018
6DAW
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BU of 6daw by Molmil
X-ray crystal structure of NapI L-arginine desaturase bound to Fe(II), L-arginine, and acetate
分子名称: ACETATE ION, ARGININE, FE (II) ION, ...
著者Mitchell, A.J, Dunham, N.P, Boal, A.K.
登録日2018-05-02
公開日2018-05-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Two Distinct Mechanisms for C-C Desaturation by Iron(II)- and 2-(Oxo)glutarate-Dependent Oxygenases: Importance of alpha-Heteroatom Assistance.
J. Am. Chem. Soc., 140, 2018
6DB2
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BU of 6db2 by Molmil
X-ray crystal structure of VioC bound to vanadyl ion, L-homoarginine, and succinate
分子名称: 1,2-ETHANEDIOL, Alpha-ketoglutarate-dependent L-arginine hydroxylase, L-HOMOARGININE, ...
著者Dunham, N.P, Mitchell, A.J, Boal, A.K.
登録日2018-05-02
公開日2018-05-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Two Distinct Mechanisms for C-C Desaturation by Iron(II)- and 2-(Oxo)glutarate-Dependent Oxygenases: Importance of alpha-Heteroatom Assistance.
J. Am. Chem. Soc., 140, 2018
6CWQ
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BU of 6cwq by Molmil
X-ray crystal structure of Flavobacterium johnsoniae dimanganese(II) ribonucleotide reductase beta subunit (as-isolated)
分子名称: MAGNESIUM ION, MANGANESE (II) ION, Ribonucleotide reductase
著者Rose, H.R, Maggiolo, A.O, Boal, A.K.
登録日2018-03-30
公開日2018-04-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Basis for Superoxide Activation of Flavobacterium johnsoniae Class I Ribonucleotide Reductase and for Radical Initiation by Its Dimanganese Cofactor.
Biochemistry, 57, 2018
6CWP
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BU of 6cwp by Molmil
X-ray crystal structure of Flavobacterium johnsoniae dimanganese(II) ribonucleotide reductase beta subunit (anaerobic)
分子名称: MANGANESE (II) ION, Ribonucleotide reductase, VAL-GLU-TYR-THR-LYS-HIS
著者Maggiolo, A.O, Rose, H.R, Boal, A.K.
登録日2018-03-30
公開日2018-04-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structural Basis for Superoxide Activation of Flavobacterium johnsoniae Class I Ribonucleotide Reductase and for Radical Initiation by Its Dimanganese Cofactor.
Biochemistry, 57, 2018
6DAZ
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BU of 6daz by Molmil
X-ray crystal structure of VioC bound to Fe(II), 3S-hydroxy-L-homoarginine, and succinate
分子名称: (3S)-N~6~-carbamimidoyl-3-hydroxy-L-lysine, Alpha-ketoglutarate-dependent L-arginine hydroxylase, FE (II) ION, ...
著者Dunham, N.P, Mitchell, A.J, Boal, A.K.
登録日2018-05-02
公開日2018-05-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Two Distinct Mechanisms for C-C Desaturation by Iron(II)- and 2-(Oxo)glutarate-Dependent Oxygenases: Importance of alpha-Heteroatom Assistance.
J. Am. Chem. Soc., 140, 2018

 

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