3W34
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![BU of 3w34 by Molmil](/molmil-images/mine/3w34) | Ternary complex of Thermus thermophilus HB8 uridine-cytidine kinase with substrates | 分子名称: | 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Uridine kinase | 著者 | Tomoike, F, Nakagawa, N, Masui, R, Kuramitsu, S. | 登録日 | 2012-12-10 | 公開日 | 2013-12-11 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (1.91 Å) | 主引用文献 | Structural and Biochemical Studies on the Reaction Mechanism of Uridine-Cytidine Kinase Protein J., 34, 2015
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3W8R
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![BU of 3w8r by Molmil](/molmil-images/mine/3w8r) | Mutant structure of Thermus thermophilus HB8 uridine-cytidine kinase | 分子名称: | 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Uridine kinase | 著者 | Tomoike, F, Nakagawa, N, Masui, R, Kuramitsu, S. | 登録日 | 2013-03-21 | 公開日 | 2014-03-26 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Indispensable residue for uridine binding in the uridine-cytidine kinase family. Biochem Biophys Rep, 11, 2017
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2YYH
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2Z1A
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![BU of 2z1a by Molmil](/molmil-images/mine/2z1a) | Crystal structure of 5'-nucleotidase precursor from Thermus thermophilus HB8 | 分子名称: | 5'-nucleotidase, PHOSPHATE ION, THYMIDINE, ... | 著者 | Nakagawa, N, Kishishita, S, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2007-05-08 | 公開日 | 2007-11-13 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.75 Å) | 主引用文献 | Crystal structure of 5'-nucleotidase precursor from Thermus thermophilus HB8 To be Published
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3QZ1
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5WYA
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![BU of 5wya by Molmil](/molmil-images/mine/5wya) | Structure of amino acid racemase, 2.65 A | 分子名称: | (2S,3S)-3-methyl-2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]pentanoic acid, DIMETHYL SULFOXIDE, Isoleucine 2-epimerase | 著者 | Sakuraba, H, Mutaguchi, Y, Hayashi, J, Ohshima, T. | 登録日 | 2017-01-11 | 公開日 | 2017-04-19 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.65 Å) | 主引用文献 | Crystal structure of the novel amino-acid racemase isoleucine 2-epimerase from Lactobacillus buchneri. Acta Crystallogr D Struct Biol, 73, 2017
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5WYF
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![BU of 5wyf by Molmil](/molmil-images/mine/5wyf) | Structure of amino acid racemase, 2.12 A | 分子名称: | CADMIUM ION, Isoleucine 2-epimerase, N-[O-PHOSPHONO-PYRIDOXYL]-ISOLEUCINE | 著者 | Sakuraba, H, Mutaguchi, Y, Hayashi, J, Ohshima, T. | 登録日 | 2017-01-12 | 公開日 | 2017-04-19 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.12 Å) | 主引用文献 | Crystal structure of the novel amino-acid racemase isoleucine 2-epimerase from Lactobacillus buchneri. Acta Crystallogr D Struct Biol, 73, 2017
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4YSV
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4YSN
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![BU of 4ysn by Molmil](/molmil-images/mine/4ysn) | Structure of aminoacid racemase in complex with PLP | 分子名称: | PYRIDOXAL-5'-PHOSPHATE, Putative 4-aminobutyrate aminotransferase | 著者 | Sakuraba, H, Mutaguchi, Y, Hayashi, J, Ohshima, T. | 登録日 | 2015-03-17 | 公開日 | 2016-04-20 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.94 Å) | 主引用文献 | Crystal structure of the novel amino-acid racemase isoleucine 2-epimerase from Lactobacillus buchneri. Acta Crystallogr D Struct Biol, 73, 2017
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2YYB
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![BU of 2yyb by Molmil](/molmil-images/mine/2yyb) | Crystal structure of TTHA1606 from Thermus thermophilus HB8 | 分子名称: | Hypothetical protein TTHA1606 | 著者 | Tomoike, F, Nakagwa, N, Ebihara, A, Yokoyama, S, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2007-04-28 | 公開日 | 2008-05-06 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Crystal structure of the conserved hypothetical protein TTHA1606 from Thermus thermophilus HB8. Proteins, 76, 2009
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3AU6
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![BU of 3au6 by Molmil](/molmil-images/mine/3au6) | DNA polymerase X from Thermus thermophilus HB8 ternary complex with primer/template DNA and ddGTP | 分子名称: | 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*CP*AP*GP*TP*AP*TP*(DDG))-3', 5'-D(*CP*GP*GP*CP*CP*AP*TP*AP*CP*TP*G)-3', ... | 著者 | Nakane, S, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2011-01-28 | 公開日 | 2012-01-25 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (3.3 Å) | 主引用文献 | The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA. J.Mol.Biol., 417, 2012
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1V26
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![BU of 1v26 by Molmil](/molmil-images/mine/1v26) | Crystal structure of tt0168 from Thermus thermophilus HB8 | 分子名称: | ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, MYRISTIC ACID, ... | 著者 | Hisanaga, Y, Ago, H, Nakatsu, T, Hamada, K, Ida, K, Kanda, H, Yamamoto, M, Hori, T, Arii, Y, Sugahara, M, Kuramitsu, S, Yokoyama, S, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2003-10-07 | 公開日 | 2004-07-27 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Structural Basis of the Substrate-specific Two-step Catalysis of Long Chain Fatty Acyl-CoA Synthetase Dimer J.Biol.Chem., 279, 2004
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1ULT
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![BU of 1ult by Molmil](/molmil-images/mine/1ult) | Crystal structure of tt0168 from Thermus thermophilus HB8 | 分子名称: | CITRIC ACID, long chain fatty acid-CoA ligase | 著者 | Hisanaga, Y, Ago, H, Nakatsu, T, Hamada, K, Ida, K, Kanda, H, Yamamoto, M, Hori, T, Arii, Y, Sugahara, M, Kuramitsu, S, Yokoyama, S, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2003-09-16 | 公開日 | 2004-07-27 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.55 Å) | 主引用文献 | Structural basis of the substrate specific two-step catalysis of long chain fatty acyl-CoA synthetase dimer J.Biol.Chem., 279, 2004
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1WM9
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1VCO
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1V25
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![BU of 1v25 by Molmil](/molmil-images/mine/1v25) | Crystal structure of tt0168 from Thermus thermophilus HB8 | 分子名称: | MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, long-chain-fatty-acid-CoA synthetase | 著者 | Hisanaga, Y, Ago, H, Nakatsu, T, Hamada, K, Ida, K, Kanda, H, Yamamoto, M, Hori, T, Arii, Y, Sugahara, M, Kuramitsu, S, Yokoyama, S, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2003-10-07 | 公開日 | 2004-07-27 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Structural Basis of the Substrate-specific Two-step Catalysis of Long Chain Fatty Acyl-CoA Synthetase Dimer J.Biol.Chem., 279, 2004
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1VCM
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1VCN
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3W7B
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![BU of 3w7b by Molmil](/molmil-images/mine/3w7b) | Crystal structure of formyltetrahydrofolate deformylase from Thermus thermophilus HB8 | 分子名称: | Formyltetrahydrofolate deformylase | 著者 | Sampei, G, Yanagida, Y, Ogata, N, Kusano, M, Terao, K, Kawai, H, Fukai, Y, Kanagawa, M, Inoue, Y, Baba, S, Kawai, G. | 登録日 | 2013-02-28 | 公開日 | 2014-01-08 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.71 Å) | 主引用文献 | Structures and reaction mechanisms of the two related enzymes, PurN and PurU J.Biochem., 154, 2013
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3AUF
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![BU of 3auf by Molmil](/molmil-images/mine/3auf) | Crystal structure of glycinamide ribonucleotide transformylase 1 from Symbiobacterium toebii | 分子名称: | Glycinamide ribonucleotide transformylase 1 | 著者 | Kanagawa, M, Baba, S, Nagira, T, Kuramitsu, S, Yokoyama, S, Sampei, G, Kawai, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2011-02-03 | 公開日 | 2012-03-07 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.07 Å) | 主引用文献 | Structures and reaction mechanisms of the two related enzymes, PurN and PurU. J.Biochem., 154, 2013
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3AYT
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![BU of 3ayt by Molmil](/molmil-images/mine/3ayt) | TTHB071 protein from Thermus thermophilus HB8 | 分子名称: | Putative uncharacterized protein TTHB071, ZINC ION | 著者 | Nakane, S, Wakamatsu, T, Fukui, K, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2011-05-17 | 公開日 | 2011-10-19 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | 主引用文献 | In vivo, in vitro, and x-ray crystallographic analyses suggest the involvement of an uncharacterized triose-phosphate isomerase (TIM) barrel protein in protection against oxidative stress J.Biol.Chem., 286, 2011
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3AYV
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![BU of 3ayv by Molmil](/molmil-images/mine/3ayv) | TTHB071 protein from Thermus thermophilus HB8 soaking with ZnCl2 | 分子名称: | Putative uncharacterized protein TTHB071, ZINC ION | 著者 | Nakane, S, Wakamatsu, T, Fukui, K, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2011-05-17 | 公開日 | 2011-10-19 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.85 Å) | 主引用文献 | In vivo, in vitro, and x-ray crystallographic analyses suggest the involvement of an uncharacterized triose-phosphate isomerase (TIM) barrel protein in protection against oxidative stress J.Biol.Chem., 286, 2011
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2YWR
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![BU of 2ywr by Molmil](/molmil-images/mine/2ywr) | Crystal structure of GAR transformylase from Aquifex aeolicus | 分子名称: | COBALT (II) ION, MAGNESIUM ION, Phosphoribosylglycinamide formyltransferase | 著者 | Kanagawa, M, Baba, S, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2007-04-23 | 公開日 | 2007-10-23 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (1.77 Å) | 主引用文献 | Structures and reaction mechanisms of the two related enzymes, PurN and PurU. J.Biochem., 154, 2013
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2Z01
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![BU of 2z01 by Molmil](/molmil-images/mine/2z01) | Crystal structure of phosphoribosylaminoimidazole synthetase from Geobacillus kaustophilus | 分子名称: | Phosphoribosylformylglycinamidine cyclo-ligase | 著者 | Kanagawa, M, Baba, S, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2007-05-06 | 公開日 | 2007-11-06 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Crystal structures and ligand binding of PurM proteins from Thermus thermophilus and Geobacillus kaustophilus J.Biochem., 2015
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2YW2
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![BU of 2yw2 by Molmil](/molmil-images/mine/2yw2) | Crystal structure of GAR synthetase from Aquifex aeolicus in complex with ATP | 分子名称: | ADENOSINE-5'-TRIPHOSPHATE, PHOSPHATE ION, Phosphoribosylamine--glycine ligase | 著者 | Baba, S, Kanagawa, M, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2007-04-19 | 公開日 | 2007-10-23 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Crystal structures of glycinamide ribonucleotide synthetase, PurD, from thermophilic eubacteria J.Biochem., 148, 2010
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