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7D5E
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BU of 7d5e by Molmil
Left-handed G-quadruplex containing two bulges
分子名称: 2xBulge-LHG4motif, POTASSIUM ION, SODIUM ION, ...
著者Das, P, Maity, A, Ngo, K.H, Winnerdy, F.R, Bakalar, B, Mechulam, Y, Schmitt, E, Phan, A.T.
登録日2020-09-25
公開日2021-02-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.296 Å)
主引用文献Bulges in left-handed G-quadruplexes.
Nucleic Acids Res., 49, 2021
7DFY
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BU of 7dfy by Molmil
Novel motif for left-handed G-quadruplex formation
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2xMotif2, POTASSIUM ION, ...
著者Das, P, Winnerdy, F.R, Maity, A, Mechulam, Y, Phan, A.T.
登録日2020-11-10
公開日2021-09-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献A novel minimal motif for left-handed G-quadruplex formation.
Chem.Commun.(Camb.), 57, 2021
6Y4B
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BU of 6y4b by Molmil
Structure of cyclodipeptide synthase from Candidatus Glomeribacter gigasporarum bound to Phe-tRNAPhe
分子名称: Cyclodipeptide synthase, PHENYLALANINE, RNA (77-MER)
著者Bourgeois, G, Mechulam, Y, Schmitt, E.
登録日2020-02-20
公開日2020-12-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (5 Å)
主引用文献Structural basis of the interaction between cyclodipeptide synthases and aminoacylated tRNA substrates.
Rna, 26, 2020
6Y3G
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BU of 6y3g by Molmil
Crystal structure of phenylalanine tRNA from Escherichia coli
分子名称: CALCIUM ION, GLYCEROL, GUANIDINE, ...
著者Bourgeois, G, Mechulam, Y, Schmitt, E.
登録日2020-02-18
公開日2020-12-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural basis of the interaction between cyclodipeptide synthases and aminoacylated tRNA substrates.
Rna, 26, 2020
5MLQ
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BU of 5mlq by Molmil
Structure of CDPS from Nocardia brasiliensis
分子名称: CDPS, CITRIC ACID
著者Bourgeois, G, Seguin, J, Moutiez, M, Babin, M, Belin, P, Mechulam, Y, Gondry, M, Schmitt, E.
登録日2016-12-07
公開日2018-05-02
最終更新日2019-05-15
実験手法X-RAY DIFFRACTION (3.18 Å)
主引用文献Structural basis for partition of the cyclodipeptide synthases into two subfamilies.
J.Struct.Biol., 203, 2018
5MLP
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BU of 5mlp by Molmil
Structure of CDPS from Rickettsiella grylli
分子名称: Uncharacterized protein
著者Bourgeois, G, Seguin, J, Moutiez, M, Babin, M, Belin, P, Mechulam, Y, Gondry, M, Schmitt, E.
登録日2016-12-07
公開日2018-05-02
最終更新日2019-05-15
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structural basis for partition of the cyclodipeptide synthases into two subfamilies.
J.Struct.Biol., 203, 2018
6EZ3
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BU of 6ez3 by Molmil
Structure of CDPS from Staphylococcus haemolyticus
分子名称: Cyclo(L-leucyl-L-leucyl) synthase, SULFATE ION
著者Schmitt, E, Mechulam, Y, Bourgeois, G.
登録日2017-11-14
公開日2018-11-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for partition of the cyclodipeptide synthases into two subfamilies.
J. Struct. Biol., 203, 2018
6Q6R
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BU of 6q6r by Molmil
Recognition of different base tetrads by RHAU: X-ray crystal structure of G4 recognition motif bound to the 3-end tetrad of a DNA G-quadruplex
分子名称: ATP-dependent DNA/RNA helicase DHX36, POTASSIUM ION, Parallel stranded DNA G-quadruplex
著者Heddi, B, Cheong, V.V, Schmitt, E, Mechulam, Y, Phan, A.T.
登録日2018-12-11
公開日2019-10-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Recognition of different base tetrads by RHAU (DHX36): X-ray crystal structure of the G4 recognition motif bound to the 3'-end tetrad of a DNA G-quadruplex.
J.Struct.Biol., 209, 2020
6FQ2
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BU of 6fq2 by Molmil
Structure of minimal sequence for left -handed G-quadruplex formation
分子名称: DNA (5'-D(*GP*TP*GP*GP*TP*GP*GP*TP*GP*GP*TP*G)-3'), POTASSIUM ION
著者Schmitt, E, Mechulam, Y, Phan, A.T, Heddi, B, Bakalar, B.
登録日2018-02-13
公開日2018-12-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献A Minimal Sequence for Left-Handed G-Quadruplex Formation.
Angew. Chem. Int. Ed. Engl., 58, 2019
6QJO
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BU of 6qjo by Molmil
DNA containing both right- and left-handed parallel-stranded G-quadruplexes
分子名称: DNA (28-MER), POTASSIUM ION
著者Winnerdy, F.R, Bakalar, B, Maity, A, Vandana, J.J, Schmitt, E, Mechulam, Y, Phan, A.T.
登録日2019-01-24
公開日2019-07-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献NMR solution and X-ray crystal structures of a DNA molecule containing both right- and left-handed parallel-stranded G-quadruplexes.
Nucleic Acids Res., 47, 2019
6GZ6
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BU of 6gz6 by Molmil
Structure of a left-handed G-quadruplex
分子名称: DNA (27-MER), POTASSIUM ION
著者Bakalar, B, Heddi, B, Schmitt, E, Mechulam, Y, Phan, A.T.
登録日2018-07-03
公開日2019-04-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.006 Å)
主引用文献A Minimal Sequence for Left-Handed G-Quadruplex Formation.
Angew.Chem.Int.Ed.Engl., 58, 2019
5OCD
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BU of 5ocd by Molmil
structure of a CDPS from Fluoribacter dumoffii
分子名称: Cyclodipeptide synthase
著者Schmitt, E, Mechulam, Y, Bourgeois, G.
登録日2017-06-30
公開日2018-08-01
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.06 Å)
主引用文献Structural basis for partition of the cyclodipeptide synthases into two subfamilies.
J. Struct. Biol., 203, 2018
4RD2
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BU of 4rd2 by Molmil
Structure of aIF2-gamma H97A variant from Sulfolobus solfataricus bound to GDPNP
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
著者Dubiez, E, Aleksandrov, A, Lazennec-Schurdevin, C, Mechulam, Y, Schmitt, E.
登録日2014-09-18
公開日2015-05-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.585 Å)
主引用文献Identification of a second GTP-bound magnesium ion in archaeal initiation factor 2.
Nucleic Acids Res., 43, 2015
4RD4
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BU of 4rd4 by Molmil
Structure of aIF2 gamma from sulfolobus solfataricus bound to gdpnp
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
著者Dubiez, E, Aleksandrov, A, Lazennec-Schurdevin, C, Mechulam, Y, Schmitt, E.
登録日2014-09-18
公開日2015-05-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Identification of a second GTP-bound magnesium ion in archaeal initiation factor 2.
Nucleic Acids Res., 43, 2015
4RCY
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BU of 4rcy by Molmil
Structure of aIF2-gamma D19A variant from Sulfolobus solfataricus bound to GTP
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Dubiez, E, Aleksandrov, A, Lazennec-Schurdevin, C, Mechulam, Y, Schmitt, E.
登録日2014-09-18
公開日2015-05-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Identification of a second GTP-bound magnesium ion in archaeal initiation factor 2.
Nucleic Acids Res., 43, 2015
4RD0
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BU of 4rd0 by Molmil
Structure of aIF2-gamma D19A variant from Sulfolobus solfataricus bound to GDP
分子名称: CHLORIDE ION, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Dubiez, E, Aleksandrov, A, Lazennec-Schurdevin, C, Mechulam, Y, Schmitt, E.
登録日2014-09-18
公開日2015-05-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.713 Å)
主引用文献Identification of a second GTP-bound magnesium ion in archaeal initiation factor 2.
Nucleic Acids Res., 43, 2015
4U5M
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BU of 4u5m by Molmil
Structure of a left-handed DNA G-quadruplex
分子名称: DNA (28-MER), MAGNESIUM ION, POTASSIUM ION
著者Schmitt, E, Mechulam, Y, Phan, A.T, Brahim, H, Chung, W.J, Lim, K.W.
登録日2014-07-25
公開日2015-02-25
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of a left-handed DNA G-quadruplex.
Proc.Natl.Acad.Sci.USA, 112, 2015
5JBH
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BU of 5jbh by Molmil
Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-IN conformation
分子名称: 16S ribosomal RNA, 30S ribosomal protein SX, 30S ribosomal protein eL41, ...
著者Coureux, P.-D, Schmitt, E, Mechulam, Y.
登録日2016-04-13
公開日2016-12-07
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (5.34 Å)
主引用文献Cryo-EM study of start codon selection during archaeal translation initiation.
Nat Commun, 7, 2016
5JB3
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BU of 5jb3 by Molmil
Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-REMOTE conformation
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Coureux, P.-D, Schmitt, E, Mechulam, Y.
登録日2016-04-13
公開日2016-11-30
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (5.34 Å)
主引用文献Cryo-EM study of start codon selection during archaeal translation initiation.
Nat Commun, 7, 2016
5L4O
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BU of 5l4o by Molmil
Structure of an E.coli initiator tRNAfMet A1-U72 variant
分子名称: SODIUM ION, tRNA (76-MER)
著者Monestier, A, Schmitt, E, Mechulam, Y.
登録日2016-05-26
公開日2017-03-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.799 Å)
主引用文献The structure of an E. coli tRNAf(Met) A1-U72 variant shows an unusual conformation of the A1-U72 base pair.
RNA, 23, 2017
1PFY
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BU of 1pfy by Molmil
METHIONYL-TRNA SYNTHETASE FROM ESCHERICHIA COLI COMPLEXED WITH METHIONYL SULPHAMOYL ADENOSINE
分子名称: 5'-O-[(L-METHIONYL)-SULPHAMOYL]ADENOSINE, Methionyl-tRNA synthetase, ZINC ION
著者Crepin, T, Schmitt, E, Mechulam, Y, Sampson, P.B, Vaughan, M.D, Honek, J.F, Blanquet, S.
登録日2003-05-27
公開日2004-02-17
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Use of analogues of methionine and methionyl adenylate to sample conformational changes during catalysis in Escherichia coli methionyl-tRNA synthetase.
J.Mol.Biol., 332, 2003
1PFU
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BU of 1pfu by Molmil
METHIONYL-TRNA SYNTHETASE FROM ESCHERICHIA COLI COMPLEXED WITH METHIONINE PHOSPHINATE
分子名称: (1-AMINO-3-METHYLSULFANYL-PROPYL)-PHOSPHINIC ACID, Methionyl-tRNA synthetase, ZINC ION
著者Crepin, T, Schmitt, E, Mechulam, Y, Sampson, P.B, Vaughan, M.D, Honek, J.F, Blanquet, S.
登録日2003-05-27
公開日2004-02-17
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Use of analogues of methionine and methionyl adenylate to sample conformational changes during catalysis in Escherichia coli methionyl-tRNA synthetase.
J.Mol.Biol., 332, 2003
1PG0
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BU of 1pg0 by Molmil
Methionyl-trna synthetase from escherichia coli complexed with methioninyl adenylate
分子名称: L-METHIONYL ADENYLATE, Methionyl-tRNA synthetase
著者Crepin, T, Schmitt, E, Mechulam, Y, Sampson, P.B, Vaughan, M.D, Honek, J.F, Blanquet, S.
登録日2003-05-27
公開日2004-02-17
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Use of analogues of methionine and methionyl adenylate to sample conformational changes during catalysis in Escherichia coli methionyl-tRNA synthetase.
J.Mol.Biol., 332, 2003
1PFW
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BU of 1pfw by Molmil
METHIONYL-TRNA SYNTHETASE FROM ESCHERICHIA COLI COMPLEXED WITH TRIFLUOROMETHIONINE
分子名称: 2-AMINO-4-TRIFLUOROMETHYLSULFANYL-BUTYRIC ACID, Methionyl-tRNA synthetase, ZINC ION
著者Crepin, T, Schmitt, E, Mechulam, Y, Sampson, P.B, Vaughan, M.D, Honek, J.F, Blanquet, S.
登録日2003-05-27
公開日2004-02-17
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Use of analogues of methionine and methionyl adenylate to sample conformational changes during catalysis in Escherichia coli methionyl-tRNA synthetase.
J.Mol.Biol., 332, 2003
1PFV
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BU of 1pfv by Molmil
METHIONYL-TRNA SYNTHETASE FROM ESCHERICHIA COLI COMPLEXED WITH DIFLUOROMETHIONINE
分子名称: Methionyl-tRNA synthetase, S-(DIFLUOROMETHYL)HOMOCYSTEINE, ZINC ION
著者Crepin, T, Schmitt, E, Mechulam, Y, Sampson, P.B, Vaughan, M.D, Honek, J.F, Blanquet, S.
登録日2003-05-27
公開日2004-02-17
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Use of analogues of methionine and methionyl adenylate to sample conformational changes during catalysis in Escherichia coli methionyl-tRNA synthetase.
J.Mol.Biol., 332, 2003

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