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8WLB
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BU of 8wlb by Molmil
X-ray structure of Enterobacter cloacae allose-binding protein in complex with D-psicose
分子名称: Allose ABC transporter, alpha-D-psicopyranose
著者Kamitori, S.
登録日2023-09-29
公開日2023-10-25
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献X-ray structures of Enterobacter cloacae allose-binding protein in complexes with monosaccharides demonstrate its unique recognition mechanism for high affinity to allose.
Biochem.Biophys.Res.Commun., 682, 2023
8WL5
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BU of 8wl5 by Molmil
X-ray structure of Enterobacter cloacae allose-binding protein in free form
分子名称: 1,2-ETHANEDIOL, Allose ABC transporter
著者Kamitori, S.
登録日2023-09-29
公開日2023-10-25
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献X-ray structures of Enterobacter cloacae allose-binding protein in complexes with monosaccharides demonstrate its unique recognition mechanism for high affinity to allose.
Biochem.Biophys.Res.Commun., 682, 2023
1IZE
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BU of 1ize by Molmil
Crystal structure of Aspergillus oryzae Aspartic proteinase complexed with pepstatin
分子名称: Pepstatin, alpha-D-mannopyranose, aspartic proteinase
著者Kamitori, S, Ohtaki, A, Ino, H, Takeuchi, M.
登録日2002-10-02
公開日2003-03-04
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of Aspergillus oryzae aspartic proteinase and its complex with an inhibitor pepstatin at 1.9A resolution.
J.Mol.Biol., 326, 2003
1IZD
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BU of 1izd by Molmil
Crystal structure of Aspergillus oryzae Aspartic Proteinase
分子名称: Aspartic proteinase, alpha-D-mannopyranose
著者Kamitori, S, Ohtaki, A, Ino, H, Takeuchi, M.
登録日2002-10-02
公開日2003-03-04
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structures of Aspergillus oryzae Aspartic Proteinase and its Complex with an Inhibitor Pepstatin at 1.9 A Resolution
J.Mol.Biol., 326, 2003
2GS9
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BU of 2gs9 by Molmil
Crystal structure of TT1324 from Thermus thermophilis HB8
分子名称: FORMIC ACID, Hypothetical protein TT1324, S-ADENOSYL-L-HOMOCYSTEINE
著者Kamitori, S, Abe, A, Ebihara, A, Kanagawa, M, Nakagawa, N, Kuroishi, C, Agari, Y, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-04-25
公開日2007-03-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of TT1324 from Thermus thermophilis HB8
To be Published
3WGP
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BU of 3wgp by Molmil
Crystal Structure Analysis of Vitamin D receptor
分子名称: (1R,2R,3R,5Z,7E,14beta,17alpha)-2-(3-hydroxypropoxy)-9,10-secocholesta-5,7,10-triene-1,3,25-triol, Vitamin D3 receptor
著者Itoh, S, Iijima, S.
登録日2013-08-07
公開日2014-08-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure Analysis of Vitamin D receptor
to be published
8YJ6
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BU of 8yj6 by Molmil
Characerization of a novel format scFvXVHH single-chain Biparatopic antibody against a metal binding protein, MtsA
分子名称: Iron ABC transporter substrate-binding lipoprotein MtsA, ZINC ION
著者Ito, S, Nagatoishi, S, Nakakido, M, Tsumoto, K.
登録日2024-03-01
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Characterization of a novel format scFv×VHH single-chain biparatopic antibody against metal binding protein MtsA.
Protein Sci., 33, 2024
8YJ5
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BU of 8yj5 by Molmil
Characerization of a novel format scFvXVHH single-chain Biparatopic antibody against a metal binding protein, MtsA
分子名称: Iron ABC transporter substrate-binding lipoprotein MtsA, VHH43
著者Ito, S, Nagatoishi, S, Nakakido, M, Tsumoto, K.
登録日2024-03-01
公開日2024-06-19
実験手法X-RAY DIFFRACTION (3.66 Å)
主引用文献Characterization of a novel format scFv×VHH single-chain biparatopic antibody against metal binding protein MtsA.
Protein Sci., 33, 2024
8YJ8
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BU of 8yj8 by Molmil
Characerization of a novel format scFvXVHH single-chain Biparatopic antibody against a metal binding protein, MtsA
分子名称: Iron ABC transporter substrate-binding lipoprotein MtsA, VHH43, ZINC ION
著者Ito, S, Nagatoishi, S, Nakakido, M, Tsumoto, K.
登録日2024-03-01
公開日2024-06-19
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Characterization of a novel format scFv×VHH single-chain biparatopic antibody against metal binding protein MtsA.
Protein Sci., 33, 2024
8YJ7
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BU of 8yj7 by Molmil
Characerization of a novel format scFvXVHH single-chain Biparatopic antibody against a metal binding protein, MtsA
分子名称: Iron ABC transporter substrate-binding lipoprotein MtsA, ZINC ION, scFv13
著者Ito, S, Nagatoishi, S, Nakakido, M, Tsumoto, K.
登録日2024-03-01
公開日2024-06-19
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Characterization of a novel format scFv×VHH single-chain biparatopic antibody against metal binding protein MtsA.
Protein Sci., 33, 2024
1IT9
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BU of 1it9 by Molmil
CRYSTAL STRUCTURE OF AN ANTIGEN-BINDING FRAGMENT FROM A HUMANIZED VERSION OF THE ANTI-HUMAN FAS ANTIBODY HFE7A
分子名称: HUMANIZED ANTIBODY HFE7A, HEAVY CHAIN, LIGHT CHAIN
著者Ito, S, Takayama, T, Hanzawa, H, Takahashi, T, Miyadai, K, Serizawa, N, Hata, T, Haruyama, H.
登録日2002-01-11
公開日2003-02-25
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Humanization of the Mouse Anti-Fas Antibody HFE7A and Crystal Structure of the Humanized HFE7A Fab Fragment
BIOL.PHARM.BULL., 25, 2002
3VKN
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BU of 3vkn by Molmil
Galectin-8 N-terminal domain in free form
分子名称: CHLORIDE ION, Galectin-8
著者Kamitori, S, Yoshida, H.
登録日2011-11-18
公開日2012-09-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献X-ray structure of a protease-resistant mutant form of human galectin-8 with two carbohydrate recognition domains
Febs J., 279, 2012
3AZ1
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BU of 3az1 by Molmil
Crystal Structure Analysis of Vitamin D receptor
分子名称: Vitamin D3 receptor, {4-[3-(4-{[(2R)-2-hydroxy-3,3-dimethylbutyl]oxy}-3-methylphenyl)pentan-3-yl]-2-methylphenoxy}acetic acid
著者Itoh, S, Iijima, S.
登録日2011-05-20
公開日2011-11-02
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Novel nonsecosteroidal vitamin D(3) carboxylic acid analogs for osteoporosis, and SAR analysis.
Bioorg.Med.Chem., 19, 2011
3AZ2
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BU of 3az2 by Molmil
Crystal Structure Analysis of Vitamin D receptor
分子名称: 5-{4-[3-(4-{[(2R)-2-hydroxy-3,3-dimethylbutyl]oxy}-3-methylphenyl)pentan-3-yl]-2-methylphenoxy}pentanoic acid, Vitamin D3 receptor
著者Itoh, S, Iijima, S.
登録日2011-05-20
公開日2011-11-02
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Novel nonsecosteroidal vitamin D(3) carboxylic acid analogs for osteoporosis, and SAR analysis.
Bioorg.Med.Chem., 19, 2011
3AZ3
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BU of 3az3 by Molmil
Crystal Structure Analysis of Vitamin D receptor
分子名称: (4S)-4-hydroxy-5-[4-(3-{4-[(3S)-3-hydroxy-4,4-dimethylpentyl]-3-methylphenyl}pentan-3-yl)-2-methylphenoxy]pentanoic acid, Vitamin D3 receptor
著者Itoh, S, Iijima, S.
登録日2011-05-20
公開日2011-11-02
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Novel nonsecosteroidal vitamin D(3) carboxylic acid analogs for osteoporosis, and SAR analysis.
Bioorg.Med.Chem., 19, 2011
7E2E
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BU of 7e2e by Molmil
Crystal structure of the Estrogen-Related Receptor alpha (ERRalpha) ligand-binding domain (LBD) in complex with an agonist DS45500853 and a PGC-1alpha peptide
分子名称: 1-[4-(3-tert-butyl-4-oxidanyl-phenoxy)phenyl]ethanone, IODIDE ION, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, ...
著者Ito, S, Shinozuka, T, Kimura, T, Izumi, M, Wakabayashi, K.
登録日2021-02-05
公開日2021-06-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Discovery of a Novel Class of ERR alpha Agonists.
Acs Med.Chem.Lett., 12, 2021
7DA2
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BU of 7da2 by Molmil
The crystal structure of the chicken FANCM-MHF complex
分子名称: Centromere protein S, Centromere protein X, Fanconi anemia group M protein
著者Nishino, T, Ito, S.
登録日2020-10-14
公開日2021-03-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Structural analysis of the chicken FANCM-MHF complex and its stability.
Acta Crystallogr.,Sect.F, 77, 2021
2DDQ
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BU of 2ddq by Molmil
Crystal Structure of the Fab fragment of a R310 antibody complexed with (R)-HNE-histidine adduct
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, N-ACETYL-1-[(2R,3S,5R)-5-HYDROXY-2-PENTYLTETRAHYDROFURAN-3-YL]-L-HISTIDINE, R310 antibody heavy chain, ...
著者Ito, S.
登録日2006-02-02
公開日2006-07-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Bispecific abs against modified protein and DNA with oxidized lipids
Proc.Natl.Acad.Sci.Usa, 103, 2006
3A73
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BU of 3a73 by Molmil
Crystal Structure Analysis of Human serum albumin complexed with delta 12-prostaglandin J2
分子名称: (5Z,12Z,15S)-15-hydroxy-11-oxoprosta-5,9,12-trien-1-oic acid, MYRISTIC ACID, Serum albumin
著者Ito, S.
登録日2009-09-11
公開日2010-01-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Delta12-prostaglandin J2 as a product and ligand of human serum albumin: formation of an unusual covalent adduct at His146.
J.Am.Chem.Soc., 132, 2010
3A5J
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BU of 3a5j by Molmil
Crystal structure of protein-tyrosine phosphatase 1B
分子名称: MAGNESIUM ION, Tyrosine-protein phosphatase non-receptor type 1
著者Ito, S.
登録日2009-08-08
公開日2010-08-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Post-translational modification of a non-catalytic Cys121 of PTP1B
To be Published
3A5K
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BU of 3a5k by Molmil
Crystal structure of protein-tyrosine phosphatase 1B
分子名称: MAGNESIUM ION, Tyrosine-protein phosphatase non-receptor type 1
著者Ito, S.
登録日2009-08-08
公開日2010-08-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Post-translational modification of a non-catalytic Cys121 of PTP1B
To be Published
5XCC
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BU of 5xcc by Molmil
X-ray structure of Clostridium perfringens pili protein CppA
分子名称: Probable surface protein
著者Kamitori, S, Tamai, E.
登録日2017-03-22
公開日2018-02-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Structures of major pilins in Clostridium perfringens demonstrate dynamic conformational change.
Acta Crystallogr D Struct Biol, 75, 2019
5XCB
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BU of 5xcb by Molmil
X-ray structure of domains D1 and D2 of Clostridium perfringens pili protein CppA
分子名称: Probable surface protein
著者Kamitori, S, Tamai, E.
登録日2017-03-22
公開日2018-02-28
最終更新日2019-08-14
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Structures of major pilins in Clostridium perfringens demonstrate dynamic conformational change.
Acta Crystallogr D Struct Biol, 75, 2019
5YFK
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X-ray structure of a mutant form C232S of Clostridium perfringens sortase B
分子名称: Uncharacterized protein Sortase B
著者Kamitori, S, Tamai, E.
登録日2017-09-21
公開日2017-10-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray structure of Clostridium perfringens sortase B cysteine transpeptidase
Biochem. Biophys. Res. Commun., 493, 2017
7F5I
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X-ray structure of Clostridium perfringens-specific amidase endolysin
分子名称: GLUTAMIC ACID, SODIUM ION, ZINC ION, ...
著者Kamitori, S, Tamai, E.
登録日2021-06-22
公開日2022-05-04
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural and biochemical characterization of the Clostridium perfringens-specific Zn 2+ -dependent amidase endolysin, Psa, catalytic domain.
Biochem.Biophys.Res.Commun., 576, 2021

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