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7EA8
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Human SETD2 bound to a nucleosome containing oncohistone mutations
分子名称: 601-DNA, Histone H2A type 1-D, Histone H2B type 2-E, ...
著者Jing, H, Liu, Y.
登録日2021-03-06
公開日2021-07-14
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Cryo-EM structure of SETD2/Set2 methyltransferase bound to a nucleosome containing oncohistone mutations.
Cell Discov, 7, 2021
7EA5
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Yeast Set2 bound to a nucleosome containing oncohistone mutations
分子名称: 601-DNA, Histone H2A, Histone H2B, ...
著者Jing, H, Liu, Y.
登録日2021-03-06
公開日2021-07-14
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM structure of SETD2/Set2 methyltransferase bound to a nucleosome containing oncohistone mutations.
Cell Discov, 7, 2021
5EPL
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BU of 5epl by Molmil
Crystal Structure of chromodomain of CBX4 in complex with inhibitor UNC3866
分子名称: E3 SUMO-protein ligase CBX4, UNKNOWN ATOM OR ION, unc3866
著者Liu, Y, Tempel, W, Walker, J.R, Stuckey, J.I, Dickson, B.M, James, L.I, Frye, S.V, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2015-11-11
公開日2015-12-23
最終更新日2019-11-27
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献A cellular chemical probe targeting the chromodomains of Polycomb repressive complex 1.
Nat.Chem.Biol., 12, 2016
5I5N
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BU of 5i5n by Molmil
Crystal Structure of N-terminal Domain of Matrix Protein of Thogoto Virus at Acidic pH.
分子名称: Matrix protein
著者Liu, Y, Liang, H, Yang, M.
登録日2016-02-15
公開日2016-08-17
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.418 Å)
主引用文献pH-dependent conformational changes of a Thogoto virus matrix protein reveal mechanisms of viral assembly and uncoating
J.Gen.Virol., 97, 2016
5I5O
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BU of 5i5o by Molmil
Crystal Structure of N-terminal Domain of Matrix Protein of Thogoto Virus at Neutral pH.
分子名称: Matrix protein
著者Liu, Y, Liang, H, Yang, M.
登録日2016-02-15
公開日2016-08-17
最終更新日2017-09-27
実験手法X-RAY DIFFRACTION (2.682 Å)
主引用文献pH-dependent conformational changes of a Thogoto virus matrix protein reveal mechanisms of viral assembly and uncoating
J.Gen.Virol., 97, 2016
2K5U
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BU of 2k5u by Molmil
Solution structure of myirstoylated yeast ARF1 protein, GDP-bound
分子名称: ADP-ribosylation factor 1, GUANOSINE-5'-DIPHOSPHATE
著者Prestegard, J, Liu, Y.
登録日2008-06-30
公開日2009-01-27
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Structure and Membrane Interaction of Myristoylated ARF1
Structure, 17, 2009
8IQR
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BU of 8iqr by Molmil
Crystal structure of Anti-PEG antibody M9 Fv-clasp fragment with PEG (co-crystallization with PEG550DME)
分子名称: 2,5,8,11,14,17,20,23,26-nonaoxaoctacosane, M9 VH-SARAH, M9 VL-SARAH
著者Mori, T, Teramoto, T, Liu, Y, Mori, T, Kakuta, Y.
登録日2023-03-17
公開日2024-03-20
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Comparation of structures and binding properties between two anti-polyethylene glycol antibodies induced via T cell-independent and T cell-dependent pathway
To Be Published
8IQP
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BU of 8iqp by Molmil
Crystal structure of Anti-PEG antibody M9 Fv-clasp fragment with PEG (co-crystallization with PEG3350)
分子名称: DODECAETHYLENE GLYCOL, M9 VH-SARAH, M9 VL-SARAH
著者Mori, T, Teramoto, T, Liu, Y, Mori, T, Kakuta, Y.
登録日2023-03-17
公開日2024-03-20
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Comparation of structures and binding properties between two anti-polyethylene glycol antibodies induced via T cell-independent and T cell-dependent pathway
To Be Published
8IQQ
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BU of 8iqq by Molmil
Crystal structure of Anti-PEG antibody M9 Fv-clasp fragment with PEG (co-crystallization with PEG2000MME)
分子名称: DODECAETHYLENE GLYCOL, M9 VH-SARAH, M9 VL-SARAH
著者Mori, T, Teramoto, T, Liu, Y, Mori, T, Kakuta, Y.
登録日2023-03-17
公開日2024-03-20
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Comparation of structures and binding properties between two anti-polyethylene glycol antibodies induced via T cell-independent and T cell-dependent pathway
To Be Published
8IQS
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BU of 8iqs by Molmil
Crystal structure of Anti-PEG antibody M11 Fv-clasp fragment with PEG (co-crystallization with PEG3350)
分子名称: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, M11 VH-SARAH, M11 VL-SARAH, ...
著者Mori, T, Teramoto, T, Liu, Y, Mori, T, Kakuta, Y.
登録日2023-03-17
公開日2024-03-20
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Comparation of structures and binding properties between two anti-polyethylene glycol antibodies induced via T cell-independent and T cell-dependent pathway
To Be Published
3S9Y
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BU of 3s9y by Molmil
Crystal Structure of P. falciparum orotidine 5'-monophosphate decarboxylase complexed with 5-fluoro-6-amino-UMP in space group P21, produced from 5-fluoro-6-azido-UMP
分子名称: 6-amino-5-fluorouridine 5'-(dihydrogen phosphate), DI(HYDROXYETHYL)ETHER, HEXAETHYLENE GLYCOL, ...
著者Liu, Y, Kotra, L.P, Pai, E.F.
登録日2011-06-02
公開日2012-04-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure-activity relationships of orotidine-5'-monophosphate decarboxylase inhibitors as anticancer agents.
J.Med.Chem., 52, 2009
8VCN
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BU of 8vcn by Molmil
GluER mutant - W66F F269Y Q293T F68Y T36E P263L
分子名称: ACETATE ION, FLAVIN MONONUCLEOTIDE, GLYCEROL, ...
著者Jeffrey, P.D, Sorigue, D.R, Liu, Y, Hyster, T.K.
登録日2023-12-14
公開日2024-03-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Asymmetric Synthesis of alpha-Chloroamides via Photoenzymatic Hydroalkylation of Olefins.
J.Am.Chem.Soc., 146, 2024
7WQR
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BU of 7wqr by Molmil
Crystal structure of Aldo-keto reductase 1C3 complexed with compound 28
分子名称: Aldo-keto reductase family 1 member C3, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ~{N}-(3-chlorophenyl)-2-[(3,5-dimethyl-1,2-oxazol-4-yl)methoxy]benzamide
著者Jiang, J, Liu, Y, He, S, Chen, Y, Chu, X, Liu, Y, Guo, Q, Zhao, L, Feng, F, Liu, W, Zhang, X, Sun, H, Fang, P.
登録日2022-01-25
公開日2023-01-04
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.124 Å)
主引用文献Development of highly potent and specific AKR1C3 inhibitors to restore the chemosensitivity of drug-resistant breast cancer.
Eur.J.Med.Chem., 247, 2022
7WQS
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BU of 7wqs by Molmil
Crystal structure of Aldo-keto reductase 1C3 complexed with compound 25
分子名称: 2-[(3,5-dimethyl-1,2-oxazol-4-yl)methoxy]-~{N}-(3-methoxyphenyl)benzamide, Aldo-keto reductase family 1 member C3, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Jiang, J, Liu, Y, He, S, Chen, Y, Chu, X, Liu, Y, Guo, Q, Zhao, L, Feng, F, Liu, W, Zhang, X, Sun, H, Fang, P.
登録日2022-01-26
公開日2023-01-04
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Development of highly potent and specific AKR1C3 inhibitors to restore the chemosensitivity of drug-resistant breast cancer.
Eur.J.Med.Chem., 247, 2022
7WQM
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BU of 7wqm by Molmil
Crystal structure of Aldo-keto reductase 1C3 complexed with compound 24
分子名称: 2-[(3,5-dimethyl-1,2-oxazol-4-yl)methoxy]-~{N}-(2-methoxyphenyl)benzamide, Aldo-keto reductase family 1 member C3, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Jiang, J, Liu, Y, He, S, Chen, Y, Chu, X, Liu, Y, Guo, Q, Zhao, L, Feng, F, Liu, W, Zhang, X, Sun, H, Fang, P.
登録日2022-01-25
公開日2023-01-04
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Development of highly potent and specific AKR1C3 inhibitors to restore the chemosensitivity of drug-resistant breast cancer.
Eur.J.Med.Chem., 247, 2022
7D3X
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BU of 7d3x by Molmil
Non-specific and specific interactions work cooperatively to promote cytidine deamination catalyzed by APOBEC3A
分子名称: DNA (5'-D(*AP*TP*TP*TP*TP*CP*AP*AP*TP*T)-3'), DNA dC->dU-editing enzyme APOBEC-3A, ZINC ION
著者Cao, C, Liu, Y.
登録日2020-09-21
公開日2021-10-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Two different kinds of interaction modes of deaminase APOBEC3A with single-stranded DNA in solution detected by nuclear magnetic resonance.
Protein Sci., 31, 2022
7D3W
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BU of 7d3w by Molmil
Non-specific and specific interactions work cooperatively to promote cytidine deamination catalyzed by APOBEC3A
分子名称: DNA (5'-D(*AP*TP*TP*TP*TP*CP*AP*AP*TP*T)-3'), DNA dC->dU-editing enzyme APOBEC-3A, ZINC ION
著者Cao, C, Liu, Y, Lan, W.
登録日2020-09-21
公開日2021-10-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Two different kinds of interaction modes of deaminase APOBEC3A with single-stranded DNA in solution detected by nuclear magnetic resonance.
Protein Sci., 31, 2022
7XTO
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BU of 7xto by Molmil
Structure of ClA2 reveal the Mechanism of soil bacterial derived chlorinase
分子名称: 1-DEAZA-ADENOSINE, soil bacterial derived chlorinase
著者Liu, Y.H, Liu, Y, Li, Y.
登録日2022-05-17
公開日2023-01-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Expression, purification and structure determination of the chlorinase ClA2.
Biochem.Biophys.Res.Commun., 628, 2022
5ZBM
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BU of 5zbm by Molmil
Structure of glycolate oxidase containing FMN from Nicotiana benthamiana
分子名称: FLAVIN MONONUCLEOTIDE, Glycolate oxidase
著者Chen, Z, Liu, Y.
登録日2018-02-12
公開日2018-12-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structures of glycolate oxidase from Nicotiana benthamiana reveal a conserved pH sensor affecting the binding of FMN.
Biochem.Biophys.Res.Commun., 503, 2018
5ZBN
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BU of 5zbn by Molmil
Structure of glycolate oxidase without FMN from Nicotiana benthamiana
分子名称: Glycolate oxidase, PHOSPHATE ION
著者Chen, Z, Liu, Y.
登録日2018-02-12
公開日2018-12-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Structures of glycolate oxidase from Nicotiana benthamiana reveal a conserved pH sensor affecting the binding of FMN.
Biochem.Biophys.Res.Commun., 503, 2018
5YYS
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BU of 5yys by Molmil
Cryo-EM structure of L-fucokinase, GDP-fucose pyrophosphorylase (FKP)in Bacteroides fragilis
分子名称: L-fucokinase, L-fucose-1-P guanylyltransferase
著者Wang, J, Hu, H, Liu, Y, Zhou, Q, Wu, P, Yan, N, Wang, H.W, Wu, J.W, Sun, L.
登録日2017-12-11
公開日2018-12-12
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Cryo-EM structure of L-fucokinase/GDP-fucose pyrophosphorylase (FKP) in Bacteroides fragilis.
Protein Cell, 10, 2019
7XC5
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Crystal structure of the ANK domain of CLPB
分子名称: Isoform 2 of Caseinolytic peptidase B protein homolog
著者Liu, Y, Wu, D, Lu, G, Gao, N, Lin, J.
登録日2022-03-23
公開日2023-01-18
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Comprehensive structural characterization of the human AAA+ disaggregase CLPB in the apo- and substrate-bound states reveals a unique mode of action driven by oligomerization.
Plos Biol., 21, 2023
7W2P
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Tudor domain of SMN in complex with a small molecule
分子名称: 2-[(4-fluorophenyl)methyl]-2-azatricyclo[7.3.0.0^{3,7}]dodeca-1(9),3(7)-dien-8-imine, MAGNESIUM ION, Survival motor neuron protein, ...
著者Li, W, Arrowsmith, C.H, Edwards, A.M, Liu, Y, Min, J.
登録日2021-11-24
公開日2022-10-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献A small molecule antagonist of SMN disrupts the interaction between SMN and RNAP II.
Nat Commun, 13, 2022
7W30
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Tudor domain of SMN in complex with a small molecule
分子名称: 1,2-dimethylquinolin-4-imine, Survival motor neuron protein, UNKNOWN ATOM OR ION
著者Li, W, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Liu, Y, Min, J.
登録日2021-11-24
公開日2022-10-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A small molecule antagonist of SMN disrupts the interaction between SMN and RNAP II.
Nat Commun, 13, 2022
7WM3
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hnRNP A2/B1 RRMs in complex with single-stranded DNA
分子名称: DNA (5'-D(P*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3'), Heterogeneous nuclear ribonucleoproteins A2/B1
著者Abula, A, Liu, Y, Guo, H, Li, T, Ji, X.
登録日2022-01-14
公開日2022-06-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Structural Insight Into hnRNP A2/B1 Homodimerization and DNA Recognition.
J.Mol.Biol., 435, 2022

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