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5XPA
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BU of 5xpa by Molmil
Crystal structure of T. thermophilus Argonaute protein complexed with a bulge 9'U10' on the target strand
Descriptor: DNA (5'-D(P*TP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*TP*AP*TP*AP*GP*T)-3'), MAGNESIUM ION, RNA (5'-R(P*AP*UP*AP*CP*AP*AP*CP*CP*GP*UP*UP*CP*UP*AP*CP*UP*CP*CP*G)-3'), ...
Authors:Sheng, G, Gogakos, T, Wang, J, Zhao, H, Serganov, A, Juranek, S, Tuschl, T, Patel, J.D, Wang, Y.
Deposit date:2017-06-01
Release date:2018-04-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure/cleavage-based insights into helical perturbations at bulge sites within T. thermophilus Argonaute silencing complexes.
Nucleic Acids Res., 45, 2017
5XOU
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BU of 5xou by Molmil
Crystal structure of T. thermophilus Argonaute protein complexed with a bulge 7T8 on the guide strand
Descriptor: DNA (5'-D(*AP*CP*AP*AP*CP*CP*TP*AP*CP*TP*AP*CP*CP*TP*CP*G)-3'), DNA (5'-D(P*TP*GP*AP*GP*GP*TP*AP*TP*GP*GP*TP*TP*GP*T)-3'), MAGNESIUM ION, ...
Authors:Sheng, G, Wang, J, Zhao, H, Wang, Y.
Deposit date:2017-05-31
Release date:2017-10-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Structure/cleavage-based insights into helical perturbations at bulge sites within T. thermophilus Argonaute silencing complexes
Nucleic Acids Res., 45, 2017
5XPG
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BU of 5xpg by Molmil
Crystal structure of T. thermophilus Argonaute protein complexed with a bulge 6'U7' on the target strand
Descriptor: 5'-D(P*TP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*TP*AP*TP*A P*GP*T)-3', 5'-R(*UP*AP*U*AP*CP*AP*AP*CP*CP*UP*AP*CP*AP*UP*AP*CP*CP*UP*CP* G)-3', MAGNESIUM ION, ...
Authors:Sheng, G, Gogakos, T, Wang, J, Zhao, H, Serganov, A, Juranek, S, Tuschl, T, Patel, J.D, Wang, Y.
Deposit date:2017-06-02
Release date:2018-04-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure/cleavage-based insights into helical perturbations at bulge sites within T. thermophilus Argonaute silencing complexes.
Nucleic Acids Res., 45, 2017
7VI6
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BU of 7vi6 by Molmil
Crystal structure of GH3 beta-N-acetylhexosaminidase Amuc_2109 from Akkermansia muciniphila
Descriptor: Beta-N-acetylhexosaminidase, CHLORIDE ION, MAGNESIUM ION
Authors:Qian, K, Yang, W, Chen, X, Wang, Y, Zhang, M, Wang, M.
Deposit date:2021-09-26
Release date:2021-12-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Functional and structural characterization of a GH3 beta-N-acetylhexosaminidase from Akkermansia muciniphila involved in mucin degradation
Biochem.Biophys.Res.Commun., 589, 2022
7VI7
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BU of 7vi7 by Molmil
Crystal structure of GH3 beta-N-acetylhexosaminidase Amuc_2109 from Akkermansia muciniphila in complex with GlcNAc
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, Beta-N-acetylhexosaminidase, CHLORIDE ION, ...
Authors:Qian, K, Yang, W, Chen, X, Wang, Y, Zhang, M, Wang, M.
Deposit date:2021-09-26
Release date:2021-12-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Functional and structural characterization of a GH3 beta-N-acetylhexosaminidase from Akkermansia muciniphila involved in mucin degradation
Biochem.Biophys.Res.Commun., 589, 2022
8WX7
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BU of 8wx7 by Molmil
Crystal structure of SHP2 in complex with JAB-3186
Descriptor: (5~{S})-1'-[6-azanyl-5-(2-azanyl-3-chloranyl-pyridin-4-yl)sulfanyl-pyrazin-2-yl]spiro[5,7-dihydrocyclopenta[b]pyridine-6,4'-piperidine]-5-amine, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Ma, C, Gao, P, Kang, D, Han, H, Sun, X, Zhang, W, Qian, D, Wang, Y, Long, W.
Deposit date:2023-10-27
Release date:2024-08-14
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Discovery of JAB-3312, a Potent SHP2 Allosteric Inhibitor for Cancer Treatment.
J.Med.Chem., 67, 2024
4DRQ
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BU of 4drq by Molmil
Exploration of Pipecolate Sulfonamides as Binders of the FK506-Binding Proteins 51 and 52: Complex of FKBP51 with 2-(3-((R)-1-((S)-1-(3,5-dichlorophenylsulfonyl)piperidine-2-carbonyloxy)-3-(3,4-dimethoxy -phenyl)propyl)phenoxy)acetic acid
Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP5, {3-[(1S)-1-[({(2S)-1-[(3,5-dichlorophenyl)sulfonyl]piperidin-2-yl}carbonyl)oxy]-3-(3,4-dimethoxyphenyl)propyl]phenoxy}acetic acid
Authors:Gopalakrishnan, R, Kozany, C, Wang, Y, Hoogeland, B, Bracher, A, Hausch, F, Schneider, S.
Deposit date:2012-02-17
Release date:2012-04-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1 Å)
Cite:Exploration of Pipecolate Sulfonamides as Binders of the FK506-Binding Proteins 51 and 52.
J.Med.Chem., 55, 2012
4E6K
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BU of 4e6k by Molmil
2.0 A resolution structure of Pseudomonas aeruginosa bacterioferritin (BfrB) in complex with bacterioferritin associated ferredoxin (Bfd)
Descriptor: Bacterioferritin, FE2/S2 (INORGANIC) CLUSTER, PHOSPHATE ION, ...
Authors:Lovell, S, Battaile, K.P, Yao, H, Wang, Y, Kumar, R, Ruvinsky, A, Vasker, I, Rivera, M.
Deposit date:2012-03-15
Release date:2012-08-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Structure of the BfrB-Bfd Complex Reveals Protein-Protein Interactions Enabling Iron Release from Bacterioferritin.
J.Am.Chem.Soc., 134, 2012
4EG2
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BU of 4eg2 by Molmil
2.2 Angstrom Crystal Structure of Cytidine deaminase from Vibrio cholerae in Complex with Zinc and Uridine
Descriptor: ACETATE ION, Cytidine deaminase, MAGNESIUM ION, ...
Authors:Minasov, G, Wawrzak, Z, Skarina, T, Wang, Y, Grimshaw, S, Papazisi, L, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-03-30
Release date:2012-05-02
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:2.2 Angstrom Crystal Structure of Cytidine deaminase from Vibrio cholerae in Complex with Zinc and Uridine.
TO BE PUBLISHED
7VFV
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BU of 7vfv by Molmil
Human N-type voltage gated calcium channel CaV2.2-alpha2/delta1-beta1 complex, bound to PD173212
Descriptor: (2~{S})-~{N}-[(2~{S})-1-(~{tert}-butylamino)-1-oxidanylidene-3-(4-phenylmethoxyphenyl)propan-2-yl]-2-[(4-~{tert}-butylphenyl)methyl-methyl-amino]-4-methyl-pentanamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Dong, Y, Gao, Y, Wang, Y, Zhao, Y.
Deposit date:2021-09-13
Release date:2021-11-03
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Closed-state inactivation and pore-blocker modulation mechanisms of human Ca V 2.2.
Cell Rep, 37, 2021
7VFU
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BU of 7vfu by Molmil
Human N-type voltage gated calcium channel CaV2.2-alpha2/delta1-beta1 complex, bound to ziconotide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CHOLESTEROL HEMISUCCINATE, ...
Authors:Dong, Y, Gao, Y, Wang, Y, Zhao, Y.
Deposit date:2021-09-13
Release date:2021-11-03
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Closed-state inactivation and pore-blocker modulation mechanisms of human Ca V 2.2.
Cell Rep, 37, 2021
7VFW
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BU of 7vfw by Molmil
Human N-type voltage gated calcium channel CaV2.2-alpha2/delta1-beta1 complex, bound to CaV2.2-blocker1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-(4-chlorophenyl)-1-(2-methoxyphenyl)-3-(2,2,6,6-tetramethyloxan-4-yl)pyrazole, CALCIUM ION, ...
Authors:Dong, Y, Gao, Y, Wang, Y, Zhao, Y.
Deposit date:2021-09-13
Release date:2021-11-03
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Closed-state inactivation and pore-blocker modulation mechanisms of human Ca V 2.2.
Cell Rep, 37, 2021
7VFS
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BU of 7vfs by Molmil
Human N-type voltage gated calcium channel CaV2.2-alpha2/delta1-beta1 complex, apo state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CHOLESTEROL HEMISUCCINATE, ...
Authors:Dong, Y, Gao, Y, Wang, Y, Zhao, Y.
Deposit date:2021-09-13
Release date:2021-11-03
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Closed-state inactivation and pore-blocker modulation mechanisms of human Ca V 2.2.
Cell Rep, 37, 2021
4EKU
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BU of 4eku by Molmil
Crystal Structure of FERM Domain of Proline-rich Tyrosine Kinase 2
Descriptor: Protein-tyrosine kinase 2-beta
Authors:Savarimuthu, B, Li, R, Wang, Y.
Deposit date:2012-04-09
Release date:2012-04-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Crystal Structure of the Ferm Domain of Proline-rich Tyrosine Kinase 2
To be Published
4DZD
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BU of 4dzd by Molmil
Crystal structure of the CRISPR-associated protein Cas6e from Escherichia coli str. K-12
Descriptor: GLYCEROL, Uncharacterized protein ygcH
Authors:Wei, J, Huang, G, Wang, Y, Gong, W.
Deposit date:2012-03-01
Release date:2013-03-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:Crystal Structure of endoribonuclease Cas6e from Escherichia coli
To be Published
2F0X
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BU of 2f0x by Molmil
Crystal structure and function of human thioesterase superfamily member 2(THEM2)
Descriptor: SULFATE ION, Thioesterase superfamily member 2
Authors:Cheng, Z, Song, F, Shan, X, Wang, Y, Wei, Z, Gong, W.
Deposit date:2005-11-14
Release date:2006-10-10
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of human thioesterase superfamily member 2
Biochem.Biophys.Res.Commun., 349, 2006
4EYR
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BU of 4eyr by Molmil
Crystal structure of multidrug-resistant clinical isolate 769 HIV-1 protease in complex with ritonavir
Descriptor: HIV-1 PROTEASE, RITONAVIR
Authors:Liu, Z, Yedidi, R.S, Wang, Y, Brunzelle, J.S, Kovari, I.A, Kovari, L.C.
Deposit date:2012-05-01
Release date:2013-01-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Insights into the mechanism of drug resistance: X-ray structure analysis of multi-drug resistant HIV-1 protease ritonavir complex.
Biochem.Biophys.Res.Commun., 431, 2013
4BGG
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BU of 4bgg by Molmil
Crystal structure of the ACVR1 kinase in complex with LDN-213844
Descriptor: 1,2-ETHANEDIOL, 1-{4-[5-(3,4,5-trimethoxyphenyl)pyridin-3-yl]phenyl}piperazine, ACTIVIN RECEPTOR TYPE-1, ...
Authors:Sanvitale, C, Canning, P, Cooper, C, Wang, Y, Mohedas, A.H, Choi, S, Yu, P.B, Cuny, G.D, Nowak, R, Coutandin, D, Vollmar, M, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A, Structural Genomics Consortium (SGC)
Deposit date:2013-03-26
Release date:2013-04-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Structure-Activity Relationship of 3,5-Diaryl-2-Aminopyridine Alk2 Inhibitors Reveals Unaltered Binding Affinity for Fibrodysplasia Ossificans Progressiva Causing Mutants.
J.Med.Chem., 57, 2014
3RJY
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BU of 3rjy by Molmil
Crystal Structure of Hyperthermophilic Endo-beta-1,4-glucanase in complex with substrate
Descriptor: Endoglucanase FnCel5A, PHOSPHATE ION, alpha-D-glucopyranose
Authors:Zheng, B, Yang, W, Zhao, X, Wang, Y, Lou, Z, Rao, Z, Feng, Y.
Deposit date:2011-04-15
Release date:2012-02-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of hyperthermophilic Endo-beta-1,4-glucanase: Implications for catalytic mechanism and thermostability.
J.Biol.Chem., 287, 2012
5Z10
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BU of 5z10 by Molmil
Structure of the mechanosensitive Piezo1 channel
Descriptor: Piezo-type mechanosensitive ion channel component 1
Authors:Zhao, Q, Zhou, H, Chi, S, Wang, Y, Wang, J, Geng, J, Wu, K, Liu, W, Zhang, T, Dong, M.-Q, Wang, J, Li, X, Xiao, B.
Deposit date:2017-12-22
Release date:2018-01-31
Last modified:2020-01-29
Method:ELECTRON MICROSCOPY (3.97 Å)
Cite:Structure and mechanogating mechanism of the Piezo1 channel.
Nature, 554, 2018
3ZIF
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BU of 3zif by Molmil
Cryo-EM structures of two intermediates provide insight into adenovirus assembly and disassembly
Descriptor: HEXON PROTEIN, PENTON PROTEIN, PIX, ...
Authors:Cheng, L, Huang, X, Li, X, Xiong, W, Sun, W, Yang, C, Zhang, K, Wang, Y, Liu, H, Ji, G, Sun, F, Zheng, C, Zhu, P.
Deposit date:2013-01-09
Release date:2014-01-22
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Cryo-Em Structures of Two Bovine Adenovirus Type 3 Intermediates
Virology, 450, 2014
4BS1
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BU of 4bs1 by Molmil
MuB is an AAAplus ATPase that forms helical filaments to control target selection for DNA transposition
Descriptor: ADENOSINE-5'-DIPHOSPHATE, TRANSCRIPTIONAL REGULATOR (NTRC FAMILY)
Authors:Mizuno, N, Dramicanin, M, Mizuuchi, M, Adam, J, Wang, Y, Han, Y.W, Yang, W, Steven, A.C, Mizuuchi, K, Ramon-Maiques, S.
Deposit date:2013-06-06
Release date:2013-07-03
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (18 Å)
Cite:Mub is an Aaa+ ATPase that Forms Helical Filaments to Control Target Selection for DNA Transposition.
Proc.Natl.Acad.Sci.USA, 110, 2013
4BT1
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BU of 4bt1 by Molmil
MuB is an AAAplus ATPase that forms helical filaments to control target selection for DNA transposition
Descriptor: ADENOSINE-5'-DIPHOSPHATE, TRANSCRIPTIONAL REGULATOR
Authors:Mizuno, N, Dramicanin, M, Mizuuchi, M, Adam, J, Wang, Y, Han, Y.W, Yang, W, Steven, A.C, Mizuuchi, K, Ramon-Maiques, S.
Deposit date:2013-06-12
Release date:2013-07-03
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (16 Å)
Cite:Mub is an Aaa+ ATPase that Forms Helical Filaments to Control Target Selection for DNA Transposition.
Proc.Natl.Acad.Sci.USA, 110, 2013
4BT0
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BU of 4bt0 by Molmil
MuB is an AAAplus ATPase that forms helical filaments to control target selection for DNA transposition
Descriptor: ADENOSINE-5'-DIPHOSPHATE, TRANSCRIPTIONAL REGULATOR
Authors:Mizuno, N, Dramicanin, M, Mizuuchi, M, Adam, J, Wang, Y, Han, Y.W, Yang, W, Steven, A.C, Mizuuchi, K, Ramon-Maiques, S.
Deposit date:2013-06-12
Release date:2013-07-03
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (17 Å)
Cite:Mub is an Aaa+ ATPase that Forms Helical Filaments to Control Target Selection for DNA Transposition.
Proc.Natl.Acad.Sci.USA, 110, 2013
2CPU
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BU of 2cpu by Molmil
SUBSITE MAPPING OF THE ACTIVE SITE OF HUMAN PANCREATIC ALPHA-AMYLASE USING SUBSTRATES, THE PHARMACOLOGICAL INHIBITOR ACARBOSE, AND AN ACTIVE SITE VARIANT
Descriptor: ALPHA-AMYLASE, CALCIUM ION, CHLORIDE ION
Authors:Brayer, G.D, Sidhu, G, Maurus, R, Rydberg, E.H, Braun, C, Wang, Y, Nguyen, N.T, Overall, C.M, Withers, S.G.
Deposit date:1999-06-08
Release date:2001-06-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Subsite mapping of the human pancreatic alpha-amylase active site through structural, kinetic, and mutagenesis techniques.
Biochemistry, 39, 2000

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