Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5OXN
DownloadVisualize
BU of 5oxn by Molmil
PepTSt in complex with dipeptide Phe-Ala
Descriptor: (2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, ALANINE, ...
Authors:Martinez Molledo, M, Quistgaard, E.M, Loew, C.
Deposit date:2017-09-07
Release date:2018-02-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.196 Å)
Cite:Multispecific Substrate Recognition in a Proton-Dependent Oligopeptide Transporter.
Structure, 26, 2018
5OXO
DownloadVisualize
BU of 5oxo by Molmil
PepTSt apo structure
Descriptor: (2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, CITRIC ACID, ...
Authors:Martinez Molledo, M, Quistgaard, E.M, Loew, C.
Deposit date:2017-09-07
Release date:2018-02-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Multispecific Substrate Recognition in a Proton-Dependent Oligopeptide Transporter.
Structure, 26, 2018
5OXP
DownloadVisualize
BU of 5oxp by Molmil
PepTSt in occluded conformation with phosphate ion bound
Descriptor: (2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, Di-or tripeptide:H+ symporter, ...
Authors:Martinez Molledo, M, Quistgaard, E.M, Loew, C.
Deposit date:2017-09-07
Release date:2018-02-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.372 Å)
Cite:Multispecific Substrate Recognition in a Proton-Dependent Oligopeptide Transporter.
Structure, 26, 2018
5OXL
DownloadVisualize
BU of 5oxl by Molmil
PepTSt in complex with dipeptide Ala-Leu
Descriptor: (2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Martinez Molledo, M, Quistgaard, E.M, Loew, C.
Deposit date:2017-09-07
Release date:2018-02-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Multispecific Substrate Recognition in a Proton-Dependent Oligopeptide Transporter.
Structure, 26, 2018
4DT4
DownloadVisualize
BU of 4dt4 by Molmil
Crystal structure of the PPIase-chaperone SlpA with the chaperone binding site occupied by the linker of the purification tag
Descriptor: FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase
Authors:Quistgaard, E.M, Nordlund, P, Loew, C.
Deposit date:2012-02-20
Release date:2012-07-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:High-resolution insights into binding of unfolded polypeptides by the PPIase chaperone SlpA.
Faseb J., 26, 2012
5MMT
DownloadVisualize
BU of 5mmt by Molmil
Inward open PepTSt from Streptococcus thermophilus crystallized in space group P3121
Descriptor: Di-or tripeptide:H+ symporter
Authors:Quistgaard, E.M, Molledo, M.M, Nordlund, P, Loew, C.
Deposit date:2016-12-12
Release date:2017-01-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structure determination of a major facilitator peptide transporter: Inward facing PepTSt from Streptococcus thermophilus crystallized in space group P3121.
PLoS ONE, 12, 2017
7OXG
DownloadVisualize
BU of 7oxg by Molmil
ttSlyD FKBP domain with M8A pseudo-wild-type S2 peptide
Descriptor: 30S ribosomal protein S2, CHLORIDE ION, IMIDAZOLE, ...
Authors:Pazicky, S, Lei, J, Loew, C.
Deposit date:2021-06-22
Release date:2022-03-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Impact of distant peptide substrate residues on enzymatic activity of SlyD.
Cell.Mol.Life Sci., 79, 2022
7OXI
DownloadVisualize
BU of 7oxi by Molmil
ttSlyD with W4A pseudo-wild-type S2 peptide
Descriptor: 30S ribosomal protein S2, CHLORIDE ION, Peptidyl-prolyl cis-trans isomerase
Authors:Pazicky, S, Lei, J, Loew, C.
Deposit date:2021-06-22
Release date:2022-03-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Impact of distant peptide substrate residues on enzymatic activity of SlyD.
Cell.Mol.Life Sci., 79, 2022
7OXH
DownloadVisualize
BU of 7oxh by Molmil
ttSlyD with pseudo-wild-type S2 peptide
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 30S ribosomal protein S2, CHLORIDE ION, ...
Authors:Pazicky, S, Lei, J, Loew, C.
Deposit date:2021-06-22
Release date:2022-03-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Impact of distant peptide substrate residues on enzymatic activity of SlyD.
Cell.Mol.Life Sci., 79, 2022
7OXK
DownloadVisualize
BU of 7oxk by Molmil
ttSlyD with W4K pseudo-wild-type S2 peptide
Descriptor: 30S ribosomal protein S2, Peptidyl-prolyl cis-trans isomerase
Authors:Pazicky, S, Lei, J, Loew, C.
Deposit date:2021-06-22
Release date:2022-03-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Impact of distant peptide substrate residues on enzymatic activity of SlyD.
Cell.Mol.Life Sci., 79, 2022
7OXJ
DownloadVisualize
BU of 7oxj by Molmil
ttSlyD with M8A pseudo-wild-type S2 peptide
Descriptor: 30S ribosomal protein S2, CHLORIDE ION, Fragment of 30S ribosomal protein S2 peptide, ...
Authors:Pazicky, S, Lei, J, Loew, C.
Deposit date:2021-06-22
Release date:2022-03-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Impact of distant peptide substrate residues on enzymatic activity of SlyD.
Cell.Mol.Life Sci., 79, 2022
7PMW
DownloadVisualize
BU of 7pmw by Molmil
HsPepT1 bound to Ala-Phe in the outward facing occluded conformation
Descriptor: ALA-PHE, Solute carrier family 15 member 1
Authors:Killer, M, Wald, J, Pieprzyk, J, Marlovits, T.C, Loew, C.
Deposit date:2021-09-03
Release date:2021-10-20
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural snapshots of human PepT1 and PepT2 reveal mechanistic insights into substrate and drug transport across epithelial membranes.
Sci Adv, 7, 2021
7PMX
DownloadVisualize
BU of 7pmx by Molmil
HsPepT1 bound to Ala-Phe in the outward facing open conformation
Descriptor: ALA-PHE, Solute carrier family 15 member 1
Authors:Killer, M, Wald, J, Pieprzyk, J, Marlovits, T.C, Loew, C.
Deposit date:2021-09-03
Release date:2021-10-20
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural snapshots of human PepT1 and PepT2 reveal mechanistic insights into substrate and drug transport across epithelial membranes.
Sci Adv, 7, 2021
7PMY
DownloadVisualize
BU of 7pmy by Molmil
HsPepT2 bound to Ala-Phe in the inward facing partially occluded conformation
Descriptor: ALA-PHE, Solute carrier family 15 member 2
Authors:Killer, M, Wald, J, Pieprzyk, J, Marlovits, T.C, Loew, C.
Deposit date:2021-09-04
Release date:2021-10-20
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural snapshots of human PepT1 and PepT2 reveal mechanistic insights into substrate and drug transport across epithelial membranes.
Sci Adv, 7, 2021
7PN1
DownloadVisualize
BU of 7pn1 by Molmil
Apo HsPepT1 in the outward facing open conformation
Descriptor: Solute carrier family 15 member 1
Authors:Killer, M, Wald, J, Pieprzyk, J, Marlovits, T.C, Loew, C.
Deposit date:2021-09-04
Release date:2021-10-20
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural snapshots of human PepT1 and PepT2 reveal mechanistic insights into substrate and drug transport across epithelial membranes.
Sci Adv, 7, 2021
8B1K
DownloadVisualize
BU of 8b1k by Molmil
DtpB-Nb132-NV
Descriptor: ASN-VAL, DECANE, DODECANE, ...
Authors:Killer, M, Finocchio, G, Lei, J, Jungnickel, K, Kotov, V, Steinke, J, Bartels, K, Strauss, J, Dupeux, F, Humm, A.S, Cornaciu, I, Marquez, J, Pardon, E, Steyeart, J, Loew, C.
Deposit date:2022-09-09
Release date:2023-08-09
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Plasticity of the binding pocket in peptide transporters underpins promiscuous substrate recognition.
Cell Rep, 42, 2023
8B1D
DownloadVisualize
BU of 8b1d by Molmil
DtpB-Nb132-APF
Descriptor: ALA-PRO-PHE, DECANE, DODECANE, ...
Authors:Killer, M, Finocchio, G, Lei, J, Jungnickel, K, Kotov, V, Steinke, J, Bartels, K, Strauss, J, Dupeux, F, Humm, A.S, Cornaciu, I, Marquez, J, Pardon, E, Steyeart, J, Loew, C.
Deposit date:2022-09-09
Release date:2023-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Plasticity of the binding pocket in peptide transporters underpins promiscuous substrate recognition.
Cell Rep, 42, 2023
8B1B
DownloadVisualize
BU of 8b1b by Molmil
DtpB-Nb132-AL
Descriptor: ALA-LEU, DECANE, DODECANE, ...
Authors:Killer, M, Finocchio, G, Lei, J, Jungnickel, K, Kotov, V, Steinke, J, Bartels, K, Strauss, J, Dupeux, F, Humm, A.S, Cornaciu, I, Marquez, J, Pardon, E, Steyeart, J, Loew, C.
Deposit date:2022-09-09
Release date:2023-08-09
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Plasticity of the binding pocket in peptide transporters underpins promiscuous substrate recognition.
Cell Rep, 42, 2023
8B1F
DownloadVisualize
BU of 8b1f by Molmil
DtpB-Nb132-AV
Descriptor: ALA-VAL, DECANE, DODECANE, ...
Authors:Killer, M, Finocchio, G, Lei, J, Jungnickel, K, Kotov, V, Steinke, J, Bartels, K, Strauss, J, Dupeux, F, Humm, A.S, Cornaciu, I, Marquez, J, Pardon, E, Steyeart, J, Loew, C.
Deposit date:2022-09-09
Release date:2023-08-09
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Plasticity of the binding pocket in peptide transporters underpins promiscuous substrate recognition.
Cell Rep, 42, 2023
8B1A
DownloadVisualize
BU of 8b1a by Molmil
DtpB-Nb132-AI
Descriptor: ALA-ILE, DECANE, DODECANE, ...
Authors:Killer, M, Finocchio, G, Lei, J, Jungnickel, K, Kotov, V, Steinke, J, Bartels, K, Strauss, J, Dupeux, F, Humm, A.S, Cornaciu, I, Marquez, J, Pardon, E, Steyeart, J, Loew, C.
Deposit date:2022-09-09
Release date:2023-08-09
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Plasticity of the binding pocket in peptide transporters underpins promiscuous substrate recognition.
Cell Rep, 42, 2023
8B1E
DownloadVisualize
BU of 8b1e by Molmil
DtpB-Nb132-AQ
Descriptor: ALA-GLN, DECANE, DODECANE, ...
Authors:Killer, M, Finocchio, G, Lei, J, Jungnickel, K, Kotov, V, Steinke, J, Bartels, K, Strauss, J, Dupeux, F, Humm, A.S, Cornaciu, I, Marquez, J, Pardon, E, Steyeart, J, Loew, C.
Deposit date:2022-09-09
Release date:2023-08-09
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Plasticity of the binding pocket in peptide transporters underpins promiscuous substrate recognition.
Cell Rep, 42, 2023
8B1G
DownloadVisualize
BU of 8b1g by Molmil
DtpB-Nb132-AW
Descriptor: ALA-TRP, DECANE, DODECANE, ...
Authors:Killer, M, Finocchio, G, Lei, J, Jungnickel, K, Kotov, V, Steinke, J, Bartels, K, Strauss, J, Dupeux, F, Humm, A.S, Cornaciu, I, Marquez, J, Pardon, E, Steyeart, J, Loew, C.
Deposit date:2022-09-09
Release date:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Plasticity of the binding pocket in peptide transporters underpins promiscuous substrate recognition.
Cell Rep, 42, 2023
8B1J
DownloadVisualize
BU of 8b1j by Molmil
DtpB-Nb132-SL
Descriptor: DECANE, DODECANE, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Killer, M, Finocchio, G, Lei, J, Jungnickel, K, Kotov, V, Steinke, J, Bartels, K, Strauss, J, Dupeux, F, Humm, A.S, Cornaciu, I, Marquez, J, Pardon, E, Steyeart, J, Loew, C.
Deposit date:2022-09-09
Release date:2023-08-09
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Plasticity of the binding pocket in peptide transporters underpins promiscuous substrate recognition.
Cell Rep, 42, 2023
8B1I
DownloadVisualize
BU of 8b1i by Molmil
DtpB-Nb132-MS
Descriptor: DECANE, DODECANE, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Killer, M, Finocchio, G, Lei, J, Jungnickel, K, Kotov, V, Steinke, J, Bartels, K, Strauss, J, Dupeux, F, Humm, A.S, Cornaciu, I, Marquez, J, Pardon, E, Steyeart, J, Loew, C.
Deposit date:2022-09-09
Release date:2023-08-09
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Plasticity of the binding pocket in peptide transporters underpins promiscuous substrate recognition.
Cell Rep, 42, 2023
8B18
DownloadVisualize
BU of 8b18 by Molmil
DtpB-Nb132-AF
Descriptor: ALA-PHE, DECANE, DODECANE, ...
Authors:Killer, M, Finocchio, G, Lei, J, Jungnickel, K, Kotov, V, Steinke, J, Bartels, K, Strauss, J, Dupeux, F, Humm, A.S, Cornaciu, I, Marquez, J, Pardon, E, Steyeart, J, Loew, C.
Deposit date:2022-09-09
Release date:2023-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Plasticity of the binding pocket in peptide transporters underpins promiscuous substrate recognition.
Cell Rep, 42, 2023

224201

PDB entries from 2024-08-28

PDB statisticsPDBj update infoContact PDBjnumon