7W6M
Cryo-EM map of PEDV (Pintung 52) S protein with all three protomers in the D0-down conformation determined in situ on intact viral particles.
Summary for 7W6M
Entry DOI | 10.2210/pdb7w6m/pdb |
EMDB information | 32329 |
Descriptor | Spike glycoprotein, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... (8 entities in total) |
Functional Keywords | pedv, spike, glycoprotein, viral protein |
Biological source | Porcine epidemic diarrhea virus |
Total number of polymer chains | 3 |
Total formula weight | 494470.26 |
Authors | Hsu, S.T.D.,Draczkowski, P.,Wang, Y.S. (deposition date: 2021-12-02, release date: 2022-08-03, Last modification date: 2022-09-14) |
Primary citation | Huang, C.Y.,Draczkowski, P.,Wang, Y.S.,Chang, C.Y.,Chien, Y.C.,Cheng, Y.H.,Wu, Y.M.,Wang, C.H.,Chang, Y.C.,Chang, Y.C.,Yang, T.J.,Tsai, Y.X.,Khoo, K.H.,Chang, H.W.,Hsu, S.D. In situ structure and dynamics of an alphacoronavirus spike protein by cryo-ET and cryo-EM. Nat Commun, 13:4877-4877, 2022 Cited by PubMed: 35986008DOI: 10.1038/s41467-022-32588-3 PDB entries with the same primary citation |
Experimental method | ELECTRON MICROSCOPY (4.7 Å) |
Structure validation
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