Prefusion 2019-nCoV spike glycoprotein with a single receptor-binding domain up

Summary for 6VSB

EMDB information21375 21374
DescriptorSARS-CoV-2 spike glycoprotein, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose (3 entities in total)
Functional Keywordsspike, fusion glycoprotein, coronavirus, viral protein
Biological sourceSevere acute respiratory syndrome coronavirus 2 (2019-nCoV)
Total number of polymer chains3
Total molecular weight440385.56
Wrapp, D.,Wang, N.,Corbett, K.S.,Goldsmith, J.A.,Hsieh, C.,Abiona, O.,Graham, B.S.,McLellan, J.S. (deposition date: 2020-02-10, release date: 2020-02-26, Last modification date: 2020-07-29)
Primary citation
Wrapp, D.,Wang, N.,Corbett, K.S.,Goldsmith, J.A.,Hsieh, C.L.,Abiona, O.,Graham, B.S.,McLellan, J.S.
Cryo-EM structure of the 2019-nCoV spike in the prefusion conformation.
Science, 367:1260-1263, 2020
PubMed: 32075877 (PDB entries with the same primary citation)
DOI: 10.1126/science.abb2507
MImport into Mendeley
Experimental method

Structure validation

ClashscoreRamachandran outliersSidechain outliers14 0.2% 0.5%MetricValuePercentile RanksWorseBetterPercentile relative to all structuresPercentile relative to all EM structures
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PDB entries from 2020-12-02