6YC3

Crystal structure of the light-driven sodium pump KR2 in the pentameric form, pH 8.0

Replaces:  6REW

Summary for 6YC3

• Entry DOI: 10.2210/pdb6yc3/pdb
• Descriptor: Sodium pumping rhodopsin, (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, EICOSANE, ... (7 entities in total)
• Functional Keywords: rhodopsin, ion pumping, retinal, sodium pump, intermediate state, membrane protein
• Biological source: Dokdonia eikasta
• Total number of polymer chains: 5
• Total formula weight: 181807.39

Authors

Kovalev, K.,Gushchin, I.,Gordeliy, V. (deposition date: 2020-03-18, release date: 2020-04-08, Last modification date: 2024-01-24)

• Primary citation: Kovalev, K.,Astashkin, R.,Gushchin, I.,Orekhov, P.,Volkov, D.,Zinovev, E.,Marin, E.,Rulev, M.,Alekseev, A.,Royant, A.,Carpentier, P.,Vaganova, S.,Zabelskii, D.,Baeken, C.,Sergeev, I.,Balandin, T.,Bourenkov, G.,Carpena, X.,Boer, R.,Maliar, N.,Borshchevskiy, V.,Buldt, G.,Bamberg, E.,Gordeliy, V.; Molecular mechanism of light-driven sodium pumping.; Nat Commun, 11:2137-2137, 2020; PubMed: 32358514; DOI: 10.1038/s41467-020-16032-y

Experimental method

X-RAY DIFFRACTION (2 Å)