Comparative Model of SGIV Major Coat Protein (MCP) Trimer Based on Cryo-EM Map

Summary for 6OJN

EMDB information20091
DescriptorMajor capsid protein (1 entity in total)
Functional Keywordsicosahedral, trimers, outer coat, anchor proteins, zip proteins, viral protein
Biological sourceSingapore grouper iridovirus
Total number of polymer chains3
Total molecular weight151719.42
Pintilie, G.,Chen, D.-H.,Tran, B.N.,Jakana, J.,Wu, J.,Hew, C.L.,Chiu, W. (deposition date: 2019-04-11, release date: 2019-06-12, Last modification date: 2019-09-11)
Primary citation
Pintilie, G.,Chen, D.H.,Tran, B.N.,Jakana, J.,Wu, J.,Hew, C.L.,Chiu, W.
Segmentation and Comparative Modeling in an 8.6- angstrom Cryo-EM Map of the Singapore Grouper Iridovirus.
Structure, 2019
PubMed: 31447288 (PDB entries with the same primary citation)
DOI: 10.1016/j.str.2019.08.002
MImport into Mendeley
Experimental method

Structure validation

ClashscoreRamachandran outliersSidechain outliers6 2.5% 2.6%MetricValuePercentile RanksWorseBetterPercentile relative to all structuresPercentile relative to all EM structures