Structure of Helicobacter pylori Soj-ADP complex bound to DNA

Summary for 6IUD

DescriptorSpoOJ regulator (Soj), DNA (5'-D(P*TP*CP*CP*CP*TP*GP*TP*TP*TP*CP*AP*CP*GP*TP*GP*GP*AP*AP*CP*AP*CP*CP*CP*T)-3'), DNA (5'-D(P*AP*GP*GP*GP*TP*GP*TP*TP*CP*CP*AP*CP*GP*TP*GP*AP*AP*AP*CP*AP*GP*GP*GP*A)-3'), ... (5 entities in total)
Functional Keywordspartition protein, dna binding protein-dna complex, dna binding protein, dna binding protein/dna
Biological sourceHelicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
Total number of polymer chains6
Total molecular weight138980.61
Yen, C.Y.,Chu, C.H.,Sun, Y.J. (deposition date: 2018-11-28, release date: 2019-02-13, Last modification date: 2019-03-13)
Primary citation
Chu, C.H.,Yen, C.Y.,Chen, B.W.,Lin, M.G.,Wang, L.H.,Tang, K.Z.,Hsiao, C.D.,Sun, Y.J.
Crystal structures of HpSoj-DNA complexes and the nucleoid-adaptor complex formation in chromosome segregation.
Nucleic Acids Res., 47:2113-2129, 2019
PubMed: 30544248 (PDB entries with the same primary citation)
DOI: 10.1093/nar/gky1251
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.25820 0.1% 3.0% 2.9%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

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Molmil generated image of 6iud
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