6D7A

Structure of T. gondii PLP1 beta-rich domain

Summary for 6D7A

DescriptorPerforin-like protein 1, SODIUM ION (3 entities in total)
Functional Keywordspore forming protein, toxin, perforin-like protein, beta-prism, lipid binding protein
Biological sourceToxoplasma gondii
Total number of polymer chains2
Total molecular weight76212.08
Authors
Guerra, A.J.,Koropatkin, N.M.,Wawrzak, Z.,Bahr, C.M.E.,Carruthers, V.B. (deposition date: 2018-04-24, release date: 2018-05-16)
Primary citation
Guerra, A.J.,Zhang, O.,Huynh, M.H.,Bahr, C.M.E.,Wawrzak, Z.,Koropatkin, N.M.,Carruthers, V.B.
T. gondii PLP1 beta-rich domain confers lipid-specificity and is required for egress competence.
To Be Published,
Experimental method
X-RAY DIFFRACTION (1.13 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.165200.5%6.0%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 6d7a
no rotation
Molmil generated image of 6d7a
rotated about x axis by 90°
Molmil generated image of 6d7a
rotated about y axis by 90°

More Biological unit images

Molmil generated image of 6d7a
no rotation
Molmil generated image of 6d7a
rotated about x axis by 90°
Molmil generated image of 6d7a
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (6d7a.pdb1.gz [139.83 KB])
Coordinate files for Biological unit (6d7a.pdb2.gz [139.07 KB])
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