5Y5F

Structure of cytochrome P450nor in NO-bound state: damaged by low-dose (0.72 MGy) X-ray

Summary for 5Y5F

• Entry DOI: 10.2210/pdb5y5f/pdb
• Descriptor: NADP nitrous oxide-forming nitric oxide reductase, PROTOPORPHYRIN IX CONTAINING FE, NITRIC OXIDE, ... (5 entities in total)
• Functional Keywords: metal-binding, oxidoreductase
• Biological source: Fusarium oxysporum (Fusarium vascular wilt)
• Total number of polymer chains: 1
• Total formula weight: 45159.28

Authors

Tosha, T.,Nomura, T.,Nishida, T.,Ueno, G.,Murakami, H.,Yamashita, K.,Hirata, K.,Yamamoto, M.,Ago, H.,Sugimoto, H.,Shiro, Y.,Kubo, M. (deposition date: 2017-08-09, release date: 2017-12-06, Last modification date: 2023-11-22)

• Primary citation: Tosha, T.,Nomura, T.,Nishida, T.,Saeki, N.,Okubayashi, K.,Yamagiwa, R.,Sugahara, M.,Nakane, T.,Yamashita, K.,Hirata, K.,Ueno, G.,Kimura, T.,Hisano, T.,Muramoto, K.,Sawai, H.,Takeda, H.,Mizohata, E.,Yamashita, A.,Kanematsu, Y.,Takano, Y.,Nango, E.,Tanaka, R.,Nureki, O.,Shoji, O.,Ikemoto, Y.,Murakami, H.,Owada, S.,Tono, K.,Yabashi, M.,Yamamoto, M.,Ago, H.,Iwata, S.,Sugimoto, H.,Shiro, Y.,Kubo, M.; Capturing an initial intermediate during the P450nor enzymatic reaction using time-resolved XFEL crystallography and caged-substrate.; Nat Commun, 8:1585-1585, 2017; PubMed: 29147002; DOI: 10.1038/s41467-017-01702-1

Experimental method

X-RAY DIFFRACTION (1.5 Å)