4LIT

Structure of YcfD a Ribosomal oxygenase from Escherichia coli in complex with Cobalt and 2-oxoglutarate.

Summary for 4LIT

Entry DOI	10.2210/pdb4lit/pdb
Related	4LIU 4LIV
Descriptor	50S ribosomal protein L16 arginine hydroxylase, COBALT (II) ION, 2-OXOGLUTARIC ACID, ... (4 entities in total)
Functional Keywords	jmjc domain, dioxygenase, hydroxylation, oxidoreductase
Biological source	Escherichia coli
Total number of polymer chains	1
Total formula weight	46382.66
Authors	Brissett, N.C.,Doherty, A.J. (deposition date: 2013-07-03, release date: 2014-05-14, Last modification date: 2023-09-20)
Primary citation	Chowdhury, R.,Sekirnik, R.,Brissett, N.C.,Krojer, T.,Ho, C.H.,Ng, S.S.,Clifton, I.J.,Ge, W.,Kershaw, N.J.,Fox, G.C.,Muniz, J.R.,Vollmar, M.,Phillips, C.,Pilka, E.S.,Kavanagh, K.L.,von Delft, F.,Oppermann, U.,McDonough, M.A.,Doherty, A.J.,Schofield, C.J. Ribosomal oxygenases are structurally conserved from prokaryotes to humans. Nature, 509:422-426, 2014 Cited by PubMed: 24814345 DOI: 10.1038/nature13263 PDB entries with the same primary citation
Experimental method	X-RAY DIFFRACTION (2.4 Å)

Structure validation