1Y84

Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(imidazolyl)ethyl] Thymidine (T*)

Summary for 1Y84

Related1Y7F 1Y86
Descriptor5'-D(*GP*CP*GP*TP*AP*(EIT)P*AP*CP*GP*C)-3', MAGNESIUM ION, SPERMINE, ... (4 entities in total)
Functional Keywordsa-dna, o2'-modification, decamer., dna
Total number of polymer chains2
Total molecular weight6536.88
Authors
Egli, M.,Minasov, G.,Tereshko, V.,Pallan, P.S.,Teplova, M.,Inamati, G.B.,Lesnik, E.A.,Owens, S.R.,Ross, B.S.,Prakash, T.P.,Manoharan, M. (deposition date: 2004-12-10, release date: 2005-06-28, Last modification date: 2011-07-13)
Primary citation
Egli, M.,Minasov, G.,Tereshko, V.,Pallan, P.S.,Teplova, M.,Inamati, G.B.,Lesnik, E.A.,Owens, S.R.,Ross, B.S.,Prakash, T.P.,Manoharan, M.
Probing the Influence of Stereoelectronic Effects on the Biophysical Properties of Oligonucleotides: Comprehensive Analysis of the RNA Affinity, Nuclease Resistance, and Crystal Structure of Ten 2'-O-Ribonucleic Acid Modifications.
Biochemistry, 44:9045-9057, 2005
PubMed: 15966728 (PDB entries with the same primary citation)
DOI: 10.1021/bi050574m
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.6 Å)
?

Structure validation

RfreeClashscoreRSRZ outliers0.18430MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution