6O1D
Cryo-EM structure of the centromeric nucleosome with native alpha satellite DNA
エンティティ
| Entity ID | 鎖名 | 説明 | 種類 | 鎖長 | 化学式量 | 分子数 | データベース名(アクセス番号) | 由来する生物種 | エンティティの一般名 |
| 1 | A, E | Histone H3-like centromeric protein A | polymer | 158 | 18038.8 | 2 | UniProt (P49450) Pfam (PF00125) In PDB | Homo sapiens (Human) | Centromere autoantigen A,Centromere protein A,CENP-A |
| 2 | B, F | Histone H4 | polymer | 103 | 11394.4 | 2 | UniProt (P62805) Pfam (PF15511) In PDB | Homo sapiens (Human) | |
| 3 | C, G | Histone H2A type 1-B/E | polymer | 130 | 14165.6 | 2 | UniProt (P04908) Pfam (PF00125) Pfam (PF16211) In PDB | Homo sapiens (Human) | Histone H2A.2,Histone H2A/a,Histone H2A/m |
| 4 | D, H | Histone H2B type 1-J | polymer | 126 | 13935.2 | 2 | UniProt (P06899) Pfam (PF00125) In PDB | Homo sapiens (Human) | Histone H2B.1,Histone H2B.r,H2B/r |
| 5 | I | DNA (145-MER) | polymer | 145 | 44539.5 | 1 | Homo sapiens | ||
| 6 | J | DNA (145-MER) | polymer | 145 | 44948.8 | 1 | Homo sapiens |
配列変更
A, E: 1 - 140 (UniProt: P49450)
| PDB | 外部データベース | 詳細 |
|---|---|---|
| Met -17 | - | initiating methionine |
| Gly -16 | - | expression tag |
| Ser -15 | - | expression tag |
| Ser -14 | - | expression tag |
| His -13 | - | expression tag |
| His -12 | - | expression tag |
| His -11 | - | expression tag |
| His -10 | - | expression tag |
| His -9 | - | expression tag |
| His -8 | - | expression tag |
| Ser -7 | - | expression tag |
| Ser -6 | - | expression tag |
| Gly -5 | - | expression tag |
| Leu -4 | - | expression tag |
| Pro -3 | - | expression tag |
| Arg -2 | - | expression tag |
| Ser -1 | - | expression tag |
| His 0 | - | expression tag |
配列ビューア
非対称単位の内容
| タンパク質・ 核酸鎖 | 鎖の数 | 10 |
| 化学式量合計 | 204556.4 | |
| 全て* | 化学式量合計 | 204556.4 |
