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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

6HRM

E. coli 70S d2d8 stapled ribosome

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
11stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNApolymer44581445685.01GenBank (1370526422)
GenBank (1063812051)		Escherichia coli
235S ribosomal RNApolymer12038790.11GenBank (1403738069)Escherichia coli
3B50S ribosomal protein L2polymer27129663.21UniProt (P60422)
Pfam (PF00181)
Pfam (PF03947)
In PDB		Escherichia coliLarge ribosomal subunit protein uL2
4C50S ribosomal protein L3polymer20922277.51UniProt (P60438)
Pfam (PF00297)
In PDB		Escherichia coliLarge ribosomal subunit protein uL3
5D50S ribosomal protein L4polymer20122121.61UniProt (P60723)
Pfam (PF00573)
In PDB		Escherichia coliLarge ribosomal subunit protein uL4
6E50S ribosomal protein L5polymer17720073.21UniProt (P62399)
Pfam (PF00281)
Pfam (PF00673)
In PDB		Escherichia coliLarge ribosomal subunit protein uL5
7F50S ribosomal protein L6polymer17518672.41UniProt (P0AG55)
Pfam (PF00347)
In PDB		Escherichia coliLarge ribosomal subunit protein uL6
8G50S ribosomal protein L9polymer14915789.01UniProt (P0A7R1)
Pfam (PF03948)
Pfam (PF01281)
In PDB		Escherichia coliLarge ribosomal subunit protein bL9
9H50S ribosomal protein L10polymer13013981.11UniProt (P0A7J3)
Pfam (PF00466)
In PDB		Escherichia coli50S ribosomal protein L8,Large ribosomal subunit protein uL10
10I50S ribosomal protein L11polymer13514090.41UniProt (P0A7J7)
Pfam (PF03946)
Pfam (PF00298)
In PDB		Escherichia coliLarge ribosomal subunit protein uL11
11J50S ribosomal protein L13polymer14216050.61UniProt (P0AA10)
Pfam (PF00572)
In PDB		Escherichia coliLarge ribosomal subunit protein uL13
12K50S ribosomal protein L14polymer12313565.11UniProt (P0ADY3)
Pfam (PF00238)
In PDB		Escherichia coliLarge ribosomal subunit protein uL14
13L50S ribosomal protein L15polymer14415008.51UniProt (P02413)
Pfam (PF00828)
In PDB		Escherichia coliLarge ribosomal subunit protein uL15
14M50S ribosomal protein L16polymer13615312.31UniProt (P0ADY7)
Pfam (PF00252)
In PDB		Escherichia coliLarge ribosomal subunit protein uL16
15N50S ribosomal protein L17polymer11913592.81UniProt (P0AG44)
Pfam (PF01196)
In PDB		Escherichia coliLarge ribosomal subunit protein bL17
16O50S ribosomal protein L18polymer11612663.51UniProt (P0C018)
Pfam (PF00861)
In PDB		Escherichia coliLarge ribosomal subunit protein uL18
17P50S ribosomal protein L19polymer11413028.11UniProt (P0A7K6)
Pfam (PF01245)
In PDB		Escherichia coliLarge ribosomal subunit protein bL19
18Q50S ribosomal protein L20polymer11713396.81UniProt (P0A7L3)
Pfam (PF00453)
In PDB		Escherichia coliLarge ribosomal subunit protein bL20
19R50S ribosomal protein L21polymer10311586.41UniProt (P0AG48)
Pfam (PF00829)
In PDB		Escherichia coliLarge ribosomal subunit protein bL21
20S50S ribosomal protein L22polymer11012253.41UniProt (P61175)
Pfam (PF00237)
In PDB		Escherichia coliLarge ribosomal subunit protein uL22
21T50S ribosomal protein L23polymer9410661.61UniProt (P0ADZ0)
Pfam (PF00276)
In PDB		Escherichia coliLarge ribosomal subunit protein uL23
22U50S ribosomal protein L24polymer10311208.11UniProt (P60624)
Pfam (PF00467)
Pfam (PF17136)
In PDB		Escherichia coliLarge ribosomal subunit protein uL24
23V50S ribosomal protein L25polymer9410713.51UniProt (P68919)
Pfam (PF01386)
In PDB		Escherichia coliLarge ribosomal subunit protein bL25
24W50S ribosomal protein L27polymer768275.51UniProt (P0A7L8)
Pfam (PF01016)
In PDB		Escherichia coliLarge ribosomal subunit protein bL27
25X50S ribosomal protein L28polymer778896.41UniProt (P0A7M2)
Pfam (PF00830)
In PDB		Escherichia coliLarge ribosomal subunit protein bL28
26Y50S ribosomal protein L29polymer627155.31UniProt (P0A7M6)
Pfam (PF00831)
In PDB		Escherichia coliLarge ribosomal subunit protein uL29
27Z50S ribosomal protein L30polymer586423.61UniProt (P0AG51)
Pfam (PF00327)
In PDB		Escherichia coliLarge ribosomal subunit protein uL30
28a50S ribosomal protein L31polymer667516.71UniProt (P0A7M9)
Pfam (PF01197)
In PDB		Escherichia coliLarge ribosomal subunit protein bL31-A
29b50S ribosomal protein L32polymer566332.21UniProt (P0A7N4)
Pfam (PF01783)
In PDB		Escherichia coliLarge ribosomal subunit protein bL32
30c50S ribosomal protein L33polymer526057.21UniProt (P0A7N9)
Pfam (PF00471)
In PDB		Escherichia coliLarge ribosomal subunit protein bL33
31d50S ribosomal protein L34polymer465397.51UniProt (P0A7P5)
Pfam (PF00468)
In PDB		Escherichia coliLarge ribosomal subunit protein bL34
32e50S ribosomal protein L35polymer647181.81UniProt (P0A7Q1)
Pfam (PF01632)
In PDB		Escherichia coliLarge ribosomal subunit protein bL35,Ribosomal protein A
33f50S ribosomal protein L36polymer384377.41UniProt (P0A7Q6)
Pfam (PF00444)
In PDB		Escherichia coliLarge ribosomal subunit protein bL36-A,Ribosomal protein B
34g30S ribosomal protein S2polymer22525072.91UniProt (P0A7V0)
Pfam (PF00318)
In PDB		Escherichia coliSmall ribosomal subunit protein uS2
35h30S ribosomal protein S3polymer20823249.01UniProt (P0A7V3)
Pfam (PF07650)
Pfam (PF00189)
In PDB		Escherichia coliSmall ribosomal subunit protein uS3
36i30S ribosomal protein S4polymer20523383.01UniProt (P0A7V8)
Pfam (PF00163)
Pfam (PF01479)
In PDB		Escherichia coliSmall ribosomal subunit protein uS4
37j30S ribosomal protein S5polymer15616475.01UniProt (P0A7W1)
Pfam (PF00333)
Pfam (PF03719)
In PDB		Escherichia coliSmall ribosomal subunit protein uS5
38k30S ribosomal protein S6polymer10412126.01UniProt (P02358)
Pfam (PF01250)
In PDB		Escherichia coliSmall ribosomal subunit protein bS6
39l30S ribosomal protein S7polymer15116861.51UniProt (P02359)
Pfam (PF00177)
In PDB		Escherichia coliSmall ribosomal subunit protein uS7
40m30S ribosomal protein S8polymer12914015.41UniProt (P0A7W7)
Pfam (PF00410)
In PDB		Escherichia coliSmall ribosomal subunit protein uS8
41n30S ribosomal protein S9polymer12714554.91UniProt (P0A7X3)
Pfam (PF00380)
In PDB		Escherichia coliSmall ribosomal subunit protein uS9
42o30S ribosomal protein S10polymer9911254.01UniProt (P0A7R5)
Pfam (PF00338)
In PDB		Escherichia coliSmall ribosomal subunit protein uS10
43p30S ribosomal protein S11polymer11712487.21UniProt (P0A7R9)
Pfam (PF00411)
In PDB		Escherichia coliSmall ribosomal subunit protein uS11
44q30S ribosomal protein S12polymer12313683.11UniProt (P0A7S3)
Pfam (PF00164)
In PDB		Escherichia coliSmall ribosomal subunit protein uS12
45r30S ribosomal protein S13polymer11612868.11UniProt (P0A7S9)
Pfam (PF00416)
In PDB		Escherichia coliSmall ribosomal subunit protein uS13
46s30S ribosomal protein S14polymer10011475.41UniProt (P0AG59)
Pfam (PF00253)
In PDB		Escherichia coliSmall ribosomal subunit protein uS14
47t30S ribosomal protein S15polymer8810159.61UniProt (P0ADZ4)
Pfam (PF00312)
In PDB		Escherichia coliSmall ribosomal subunit protein uS15
48u30S ribosomal protein S16polymer829207.61UniProt (P0A7T3)
Pfam (PF00886)
In PDB		Escherichia coliSmall ribosomal subunit protein bS16
49v30S ribosomal protein S17polymer809263.91UniProt (P0AG63)
Pfam (PF00366)
In PDB		Escherichia coliSmall ribosomal subunit protein uS17
50w30S ribosomal protein S18polymer667734.91UniProt (P0A7T7)
Pfam (PF01084)
In PDB		Escherichia coliSmall ribosomal subunit protein bS18
51x30S ribosomal protein S19polymer839421.01UniProt (P0A7U3)
Pfam (PF00203)
In PDB		Escherichia coliSmall ribosomal subunit protein uS19
52y30S ribosomal protein S20polymer869577.31UniProt (P0A7U7)
Pfam (PF01649)
In PDB		Escherichia coliSmall ribosomal subunit protein bS20
53z30S ribosomal protein S21polymer708392.81UniProt (P68679)
Pfam (PF01165)
In PDB		Escherichia coliSmall ribosomal subunit protein bS21
541, 3, N, P, Q...MAGNESIUM IONnon-polymer24.3436Chemie (MG)
55a, fZINC IONnon-polymer65.42Chemie (ZN)
56waterwater18.02Chemie (HOH)
Sequence modifications
1: 1 - 1449 (GenBank: 1370526422)
PDBExternal DatabaseDetails
G 1450-linker
G 1451-linker
U 1452-linker
C 1453-linker
A 1454-linker
A 1455-linker
C 1456-linker
A 1457-linker
G 1458-linker
C 1459-linker
C 1460-linker
G 1461-linker
U 1462-linker
U 1463-linker
U 1464-linker
G 1465-linker
A 1466-linker
G 1467-linker
C 1468-linker
U 1469-linker
A 1470-linker
A 1471-linker
C 1472-linker
C 1473-linker
G 1474-linker
G 1475-linker
U 1476-linker
A 1477-linker
C 1478-linker
U 1479-linker
A 1480-linker
A 1481-linker
U 1482-linker
G 1483-linker
A 1484-linker
A 1485-linker
C 1486-linker
C 1487-linker
G 1488-linker
U 1489-linker
G 1490-linker
A 1491-linker
G 1492-linker
G 1493-linker
C 1494-linker
U 1495-linker
U 1496-linker
A 1497-linker
A 1498-linker
C 1499-linker
C 1500-linker
1: 1501 - 4357 (GenBank: 1063812051)
PDBExternal DatabaseDetails
A 1504U 4109184conflict
A 4358-expression tag
C 4359-expression tag
G 4360-expression tag
G 4361-expression tag
A 4362-expression tag
C 4363-expression tag
A 4364-expression tag
U 4365-expression tag
G 4366-expression tag
G 4367-expression tag
U 4368-expression tag
U 4369-expression tag
G 4370-expression tag
G 4371-expression tag
A 4372-expression tag
G 4373-expression tag
G 4374-expression tag
G 4375-expression tag
C 4376-expression tag
G 4377-expression tag
C 4378-expression tag
U 4379-expression tag
U 4380-expression tag
A 4381-expression tag
C 4382-expression tag
C 4383-expression tag
A 4384-expression tag
C 4385-expression tag
U 4386-expression tag
U 4387-expression tag
U 4388-expression tag
G 4389-expression tag
U 4390-expression tag
G 4391-expression tag
A 4392-expression tag
U 4393-expression tag
U 4394-expression tag
C 4395-expression tag
A 4396-expression tag
U 4397-expression tag
G 4398-expression tag
A 4399-expression tag
C 4400-expression tag
U 4401-expression tag
G 4402-expression tag
G 4403-expression tag
G 4404-expression tag
G 4405-expression tag
U 4406-expression tag
G 4407-expression tag
A 4408-expression tag
A 4409-expression tag
G 4410-expression tag
U 4411-expression tag
C 4412-expression tag
G 4413-expression tag
Ur3 4414-expression tag
A 4415-expression tag
A 4416-expression tag
C 4417-expression tag
A 4418-expression tag
A 4419-expression tag
G 4420-expression tag
G 4421-expression tag
U 4422-expression tag
A 4423-expression tag
A 4424-expression tag
C 4425-expression tag
C 4426-expression tag
G 4427-expression tag
U 4428-expression tag
A 4429-expression tag
G 4430-expression tag
G 4431-expression tag
2mg 4432-expression tag
G 4433-expression tag
Ma6 4434-expression tag
Ma6 4435-expression tag
C 4436-expression tag
C 4437-expression tag
U 4438-expression tag
G 4439-expression tag
C 4440-expression tag
G 4441-expression tag
G 4442-expression tag
U 4443-expression tag
U 4444-expression tag
G 4445-expression tag
G 4446-expression tag
A 4447-expression tag
U 4448-expression tag
C 4449-expression tag
A 4450-expression tag
C 4451-expression tag
C 4452-expression tag
U 4453-expression tag
C 4454-expression tag
C 4455-expression tag
U 4456-expression tag
U 4457-expression tag
A 4458-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains53
Total formula weight2149060.2
Non-Polymers*Number of molecules438
Total formula weight10727.8
All*Total formula weight2159788.0
*Water molecules are not included.

218500

数据于2024-04-17公开中

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