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6HD7

Cryo-EM structure of the ribosome-NatA complex

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
11Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNApolymer33961097493.91REF (831416132)Saccharomyces cerevisiae
235S rRNApolymer12138951.11Saccharomyces cerevisiae
345.8S rRNApolymer15850682.91GenBank (1398978137)Saccharomyces cerevisiae
4AtRNApolymer7624378.41Saccharomyces cerevisiae
5BP-site tRNApolymer7724815.71Saccharomyces cerevisiae
6C60S ribosomal protein L42-Apolymer10612246.71UniProt (P0CX27)
Pfam (PF00935)
In PDB
Saccharomyces cerevisiaeL41,Large ribosomal subunit protein eL42-A,YL27,YP44
7D60S ribosomal protein L43-Apolymer9210113.01UniProt (P0CX25)
Pfam (PF01780)
In PDB
Saccharomyces cerevisiaeL37a,Large ribosomal subunit protein eL43-A,YL35
8E60S ribosomal protein L2-Apolymer25427463.61UniProt (P0CX45)
Pfam (PF00181)
Pfam (PF03947)
In PDB
Saccharomyces cerevisiaeL5,Large ribosomal subunit protein uL2-A,RP8,YL6
9F60S ribosomal protein L3polymer38743850.81UniProt (P14126)
Pfam (PF00297)
In PDB
Saccharomyces cerevisiaeLarge ribosomal subunit protein uL3,Maintenance of killer protein 8,RP1,Trichodermin resistance protein,YL1
10G60S ribosomal protein L4-Apolymer36239159.11UniProt (P10664)
Pfam (PF00573)
Pfam (PF14374)
In PDB
Saccharomyces cerevisiaeL2,Large ribosomal subunit protein uL4-A,RP2,YL2
11H60S ribosomal protein L5polymer29733764.81UniProt (P26321)
Pfam (PF17144)
Pfam (PF14204)
In PDB
Saccharomyces cerevisiaeL1,L1a,Large ribosomal subunit protein uL18,Ribosomal 5S RNA-binding protein,YL3
12I60S ribosomal protein L6-Apolymer17620000.61UniProt (Q02326)
Pfam (PF01159)
In PDB
Saccharomyces cerevisiaeL17,Large ribosomal subunit protein eL6-A,RP18,YL16
13J60S ribosomal protein L7-Apolymer24427686.31UniProt (P05737)
Pfam (PF08079)
Pfam (PF00327)
In PDB
Saccharomyces cerevisiaeL6,Large ribosomal subunit protein uL30-A,RP11,YL8
14K60S ribosomal protein L8-Apolymer25628175.81UniProt (P17076)
Pfam (PF01248)
In PDB
Saccharomyces cerevisiaeL4,L4-2,L7a-1,Large ribosomal subunit protein eL8-A,Maintenance of killer protein 7,RP6,YL5
15L60S ribosomal protein L9-Apolymer19121605.11UniProt (P05738)
Pfam (PF00347)
In PDB
Saccharomyces cerevisiaeL8,Large ribosomal subunit protein uL6-A,RP24,YL11
16M60S ribosomal protein L11-Apolymer17419755.71UniProt (P0C0W9)
Pfam (PF00281)
Pfam (PF00673)
In PDB
Saccharomyces cerevisiaeL16,Large ribosomal subunit protein uL5-A,RP39,YL22
17N60S ribosomal protein L13-Apolymer19922604.21UniProt (Q12690)
Pfam (PF01294)
In PDB
Saccharomyces cerevisiaeLarge ribosomal subunit protein eL13-A
18O60S ribosomal protein L14-Apolymer13815195.11UniProt (P36105)
Pfam (PF00467)
Pfam (PF01929)
In PDB
Saccharomyces cerevisiaeLarge ribosomal subunit protein eL14-A
19P60S ribosomal protein L15-Apolymer20424482.41UniProt (P05748)
Pfam (PF00827)
In PDB
Saccharomyces cerevisiaeL13,Large ribosomal subunit protein eL15-A,RP15R,YL10,YP18
20Q60S ribosomal protein L16-Apolymer19922247.21UniProt (P26784)
Pfam (PF00572)
In PDB
Saccharomyces cerevisiaeL13a,L21,Large ribosomal subunit protein uL13-A,RP22,YL15
21R60S ribosomal protein L17-Apolymer18420589.51UniProt (P05740)
Pfam (PF00237)
In PDB
Saccharomyces cerevisiaeL20A,Large ribosomal subunit protein uL22-A,YL17
22S60S ribosomal protein L18-Apolymer18620609.31UniProt (P0CX49)
Pfam (PF17135)
In PDB
Saccharomyces cerevisiaeLarge ribosomal subunit protein eL18-A,RP28
23T60S ribosomal protein L19-Apolymer18921762.31UniProt (P0CX82)
Pfam (PF01280)
In PDB
Saccharomyces cerevisiaeL23,Large ribosomal subunit protein eL19-A,RP15L,RP33,YL14
24U60S ribosomal protein L20-Apolymer17220478.91UniProt (P0CX23)
Pfam (PF01775)
In PDB
Saccharomyces cerevisiaeL18a,Large ribosomal subunit protein eL20-A
25V60S ribosomal protein L21-Apolymer16018279.31UniProt (Q02753)
Pfam (PF01157)
In PDB
Saccharomyces cerevisiaeLarge ribosomal subunit protein eL21-A
26W60S ribosomal protein L22-Apolymer12113711.41UniProt (P05749)
Pfam (PF01776)
In PDB
Saccharomyces cerevisiaeL1c,Large ribosomal subunit protein eL22-A,RP4,YL31
27X60S ribosomal protein L23-Apolymer13714494.01UniProt (P0CX41)
Pfam (PF00238)
In PDB
Saccharomyces cerevisiaeL17a,Large ribosomal subunit protein uL14-A,YL32
28Y60S ribosomal protein L24-Apolymer15517661.71UniProt (P04449)
Pfam (PF01246)
In PDB
Saccharomyces cerevisiaeL30,Large ribosomal subunit protein eL24-A,RP29,YL21
29Z60S ribosomal protein L25polymer14215787.61UniProt (P04456)
Pfam (PF03939)
Pfam (PF00276)
In PDB
Saccharomyces cerevisiaeLarge ribosomal subunit protein uL23,RP16L,YL25,YP42'
30a60S ribosomal protein L26-Apolymer12714265.81UniProt (P05743)
Pfam (PF16906)
Pfam (PF00467)
In PDB
Saccharomyces cerevisiaeL33,Large ribosomal subunit protein uL24-A,YL33
31b60S ribosomal protein L27-Apolymer13615568.41UniProt (P0C2H6)
Pfam (PF01777)
In PDB
Saccharomyces cerevisiaeLarge ribosomal subunit protein eL27-A
32c60S ribosomal protein L28polymer14916761.71UniProt (P02406)
Pfam (PF00828)
In PDB
Saccharomyces cerevisiaeL27a,L29,Large ribosomal subunit protein uL15,RP44,RP62,YL24
33d60S ribosomal protein L29polymer596691.91UniProt (P05747)
Pfam (PF01779)
In PDB
Saccharomyces cerevisiaeLarge ribosomal subunit protein eL29,YL43
34e60S ribosomal protein L30polymer10511430.41UniProt (P14120)
Pfam (PF01248)
In PDB
Saccharomyces cerevisiaeL32,Large ribosomal subunit protein eL30,RP73,YL38
35f60S ribosomal protein L31-Apolymer10912649.81UniProt (P0C2H8)
Pfam (PF01198)
In PDB
Saccharomyces cerevisiaeL34,Large ribosomal subunit protein eL31-A,YL28
36g60S ribosomal protein L32polymer13014809.41UniProt (P38061)
Pfam (PF01655)
In PDB
Saccharomyces cerevisiaeLarge ribosomal subunit protein eL32
37h60S ribosomal protein L33-Apolymer10712177.11UniProt (P05744)
Pfam (PF01247)
In PDB
Saccharomyces cerevisiaeL37,Large ribosomal subunit protein eL33-A,RP47,YL37
38i60S ribosomal protein L34-Apolymer12113673.21UniProt (P87262)
Pfam (PF01199)
In PDB
Saccharomyces cerevisiaeLarge ribosomal subunit protein eL34-A
39j60S ribosomal protein L35-Apolymer12013942.61UniProt (P0CX84)
Pfam (PF00831)
In PDB
Saccharomyces cerevisiaeLarge ribosomal subunit protein uL29-A
40k60S ribosomal protein L36-Apolymer10011151.31UniProt (P05745)
Pfam (PF01158)
In PDB
Saccharomyces cerevisiaeL39,Large ribosomal subunit protein eL36-A,YL39
41l60S ribosomal protein L37-Apolymer889877.41UniProt (P49166)
Pfam (PF01907)
In PDB
Saccharomyces cerevisiaeL43,Large ribosomal subunit protein eL37-A,YL35,YP55
42m60S ribosomal protein L38polymer788845.61UniProt (P49167)
Pfam (PF01781)
In PDB
Saccharomyces cerevisiaeLarge ribosomal subunit protein eL38
43n60S ribosomal protein L39polymer516358.61UniProt (P04650)
Pfam (PF00832)
In PDB
Saccharomyces cerevisiaeL46,Large ribosomal subunit protein eL39,YL40
44oUbiquitin-60S ribosomal protein L40polymer12814583.11UniProt (P0CH08)
Pfam (PF00240)
Pfam (PF01020)
In PDB
Saccharomyces cerevisiae
45p60S ribosomal protein L41-Apolymer253354.21Saccharomyces cerevisiae
46rribosomal protein RPL1polymer21017890.01Saccharomyces cerevisiae
47s60S ribosomal protein L10polymer22125410.51UniProt (P41805)
Pfam (PF00252)
In PDB
Saccharomyces cerevisiaeL9,Large ribosomal subunit protein uL16,Ubiquinol-cytochrome C reductase complex subunit VI-requiring protein
48tN-terminal acetyltransferase A complex subunit NAT1polymer85499050.11UniProt (P12945)
Pfam (PF12569)
In PDB
Saccharomyces cerevisiaeNatA complex subunit NAT1,Amino-terminal,alpha-amino,acetyltransferase 1
49uN-terminal acetyltransferase A complex catalytic subunit ARD1polymer23827635.21UniProt (P07347)
Pfam (PF00583)
In PDB
Saccharomyces cerevisiaeNatA complex subunit ARD1,Arrest-defective protein 1
50vN-alpha-acetyltransferase NAT5polymer17619753.71UniProt (Q08689)
Pfam (PF00583)
In PDB
Saccharomyces cerevisiaeNatA complex subunit NAT5
51znascent polypeptide chainpolymer231975.41Saccharomyces cerevisiae
5214-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dionenon-polymer281.31Chemie (3HE)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains51
Total formula weight2145901.3
Non-Polymers*Number of molecules1
Total formula weight281.3
All*Total formula weight2146182.7
*Water molecules are not included.

217705

건을2024-03-27부터공개중

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