Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

6GZZ

T. thermophilus hibernating 100S ribosome (amc)

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1C1, C250S ribosomal protein L2polymer27229985.82UniProt (P60405)
Pfam (PF00181)
Pfam (PF03947)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
2D1, D250S ribosomal protein L3polymer20522321.02UniProt (Q5SHN8)
Pfam (PF00297)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
3E1, E250S ribosomal protein L4polymer20823071.72UniProt (Q5SHN9)
Pfam (PF00573)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)L1e
4F1, F250S ribosomal protein L5polymer18120930.42UniProt (Q5SHQ0)
Pfam (PF00281)
Pfam (PF00673)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
5G1, G250S ribosomal protein L6polymer17018567.62UniProt (P0DOY8)
Pfam (PF00347)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
6H1, H250S ribosomal protein L9polymer505454.42UniProt (Q5SLQ1)
Pfam (PF01281)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
7I1, I250S ribosomal protein L13polymer13815699.72UniProt (P60488)
Pfam (PF00572)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
8J1, J250S ribosomal protein L14polymer12213323.62UniProt (Q5SHP8)
Pfam (PF00238)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
9K1, K250S ribosomal protein L15polymer15016319.12UniProt (Q5SHQ7)
Pfam (PF00828)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
10L1, L250S ribosomal protein L16polymer14115993.92UniProt (P60489)
Pfam (PF00252)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
11M1, M250S ribosomal protein L17polymer11713619.02UniProt (Q9Z9H5)
Pfam (PF01196)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
12N1, N250S ribosomal protein L18polymer11112508.62UniProt (Q5SHQ4)
Pfam (PF00861)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)TL24
13O1, O250S ribosomal protein L19polymer13716218.82UniProt (P60490)
Pfam (PF01245)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
14P1, P250S ribosomal protein L20polymer11713648.12UniProt (P60491)
Pfam (PF00453)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
15Q1, Q250S ribosomal protein L21polymer10111069.22UniProt (P60492)
Pfam (PF00829)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
16R1, R250S ribosomal protein L22polymer11312808.12UniProt (Q5SHP3)
Pfam (PF00237)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
17S1, S250S ribosomal protein L23polymer9210273.12UniProt (Q5SHP0)
Pfam (PF00276)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
18T1, T250S ribosomal protein L24polymer10211238.72UniProt (Q5SHP9)
Pfam (PF00467)
Pfam (PF17136)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
19U1, U250S ribosomal protein L25polymer17920268.32UniProt (Q5SHZ1)
Pfam (PF01386)
Pfam (PF14693)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)TL5
20V1, V250S ribosomal protein L27polymer778703.02UniProt (P60493)
Pfam (PF01016)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
21W1, W250S ribosomal protein L28polymer9710873.02UniProt (P60494)
Pfam (PF00830)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
22X1, X250S ribosomal protein L29polymer698296.72UniProt (Q5SHP6)
Pfam (PF00831)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
23Y1, Y250S ribosomal protein L30polymer596667.92UniProt (Q5SHQ6)
Pfam (PF00327)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
24Z1, Z250S ribosomal protein L31polymer637377.52UniProt (Q5SJE1)
Pfam (PF01197)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
25a1, a250S ribosomal protein L32polymer596590.92UniProt (P80339)
Pfam (PF01783)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
26b1, b250S ribosomal protein L33polymer455602.62UniProt (P35871)
Pfam (PF00471)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
27c1, c250S ribosomal protein L34polymer496132.42UniProt (P80340)
Pfam (PF00468)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
28d1, d250S ribosomal protein L35polymer616985.62UniProt (Q5SKU1)
Pfam (PF01632)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
29A1, A223S ribosomal RNApolymer2912947013.02GenBank (55771382)Thermus thermophilus HB8
30B1, B25S ribosomal RNApolymer12239540.62GenBank (55771382)Thermus thermophilus HB8
31e1, e250S ribosomal protein L36polymer364304.22UniProt (Q5SHR2)
Pfam (PF00444)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)Ribosomal protein B
32B3, B430S ribosomal protein S2polymer23727330.62UniProt (P80371)
Pfam (PF00318)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
33C3, C430S ribosomal protein S3polymer20622862.42UniProt (P80372)
Pfam (PF07650)
Pfam (PF00189)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
34D3, D430S ribosomal protein S4polymer20824242.32UniProt (P80373)
Pfam (PF00163)
Pfam (PF01479)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
35E3, E430S ribosomal protein S5polymer15116460.22UniProt (Q5SHQ5)
Pfam (PF00333)
Pfam (PF03719)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
36F3, F430S ribosomal protein S6polymer10111988.82UniProt (Q5SLP8)
Pfam (PF01250)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)TS9
37G3, G430S ribosomal protein S7polymer15517919.82UniProt (P17291)
Pfam (PF00177)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
38H3, H430S ribosomal protein S8polymer13815868.62UniProt (P0DOY9)
Pfam (PF00410)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
39I3, I430S ribosomal protein S9polymer12714279.42UniProt (P80374)
Pfam (PF00380)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
40J3, J430S ribosomal protein S10polymer9911398.32UniProt (Q5SHN7)
Pfam (PF00338)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
41K3, K430S ribosomal protein S11polymer11812519.32UniProt (P80376)
Pfam (PF00411)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
42L3, L430S ribosomal protein S12polymer12513875.42UniProt (Q5SHN3)
Pfam (PF00164)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
43M3, M430S ribosomal protein S13polymer11713308.52UniProt (P80377)
Pfam (PF00416)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
44N3, N430S ribosomal protein S14 type Zpolymer607027.52UniProt (P0DOY6)
Pfam (PF00253)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
45O3, O430S ribosomal protein S15polymer8810447.22UniProt (Q5SJ76)
Pfam (PF00312)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
46P3, P430S ribosomal protein S16polymer849995.52UniProt (Q5SJH3)
Pfam (PF00886)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
47Q3, Q430S ribosomal protein S17polymer10011880.12UniProt (P0DOY7)
Pfam (PF00366)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
48R3, R430S ribosomal protein S18polymer627312.72UniProt (Q5SLQ0)
Pfam (PF01084)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
49S3, S430S ribosomal protein S19polymer788872.32UniProt (Q5SHP2)
Pfam (PF00203)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
50T3, T430S ribosomal protein S20polymer9910921.12UniProt (P80380)
Pfam (PF01649)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
51U3, U430S ribosomal protein Thxpolymer253089.72UniProt (Q5SIH3)
Pfam (PF17070)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)S31
52X3, W4Ribosome hibernation promoting factorpolymer576769.82UniProt (Q5SIS0)
Pfam (PF16321)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)HPF
53A3, A416S ribosomal RNApolymer1506489002.52GenBank (55771382)Thermus thermophilus HB8
54V3, V4Ribosome hibernation promoting factorpolymer11913694.62UniProt (Q5SIS0)
Pfam (PF02482)
In PDB		Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)HPF
Sequence modifications
A1, A2: 1 - 2913 (GenBank: 55771382)
PDBExternal DatabaseDetails
U 156Unk 9395conflict
A 682G 9920conflict
C 686G 9924conflict
G 697C 9935conflict
A 701C 9939conflict
U 1106G 10344conflict
A 1128C 10366conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains108
Total formula weight4284946.6
All*Total formula weight4284946.6
*Water molecules are not included.

218196

PDB entries from 2024-04-10

PDB statisticsPDBj update infoContact PDBjnumon