6E4W
Structure of AMPK bound to activator
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | 5'-AMP-activated protein kinase catalytic subunit alpha-1 | polymer | 503 | 57779.1 | 1 | UniProt (P54645) Pfam (PF00069) Pfam (PF21147) Pfam (PF16579) In PDB | Rattus norvegicus (Rat) | AMPK subunit alpha-1,Acetyl-CoA carboxylase kinase,ACACA kinase,Hydroxymethylglutaryl-CoA reductase kinase,HMGCR kinase,Tau-protein kinase PRKAA1 |
2 | B | 5'-AMP-activated protein kinase subunit beta-1 | polymer | 204 | 23097.2 | 1 | UniProt (P80386) Pfam (PF16561) Pfam (PF04739) In PDB | Rattus norvegicus (Rat) | AMPKb,5'-AMP-activated protein kinase 40 kDa subunit |
3 | C | 5'-AMP-activated protein kinase subunit gamma-1 | polymer | 330 | 37434.1 | 1 | UniProt (P80385) Pfam (PF00571) In PDB | Rattus norvegicus (Rat) | AMPKg |
4 | A | STAUROSPORINE | non-polymer | 466.5 | 1 | Chemie (STU) | |||
5 | A | 1-O-(4,6-difluoro-5-{4-[(2S)-oxan-2-yl]phenyl}-1H-indole-3-carbonyl)-beta-D-glucopyranuronic acid | non-polymer | 533.5 | 1 | Chemie (HUG) | |||
6 | A | CHLORIDE ION | non-polymer | 35.5 | 3 | Chemie (CL) | |||
7 | C | ADENOSINE MONOPHOSPHATE | non-polymer | 347.2 | 2 | Chemie (AMP) | |||
8 | C | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 1 | Chemie (ADP) | |||
9 | C | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) |
Sequence modifications
A: 0 - 516 (UniProt: P54645)
A: 525 - 548 (UniProt: P54645)
B: 68 - 270 (UniProt: P80386)
PDB | External Database | Details |
---|---|---|
Gly -1 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Ala 517 | - | linker |
Ser 518 | - | linker |
Gly 519 | - | linker |
Gly 520 | - | linker |
Pro 521 | - | linker |
Gly 522 | - | linker |
Gly 523 | - | linker |
Ser 524 | - | linker |
PDB | External Database | Details |
---|---|---|
Met 67 | - | initiating methionine |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 118310.5 | |
Non-Polymers* | Number of molecules | 9 |
Total formula weight | 2324.1 | |
All* | Total formula weight | 120634.5 |