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4YLO

E. coli Transcription Initiation Complex - 16-bp spacer and 4-nt RNA

エンティティ
Entity ID鎖名説明種類鎖長化学式量分子数データベース名(アクセス番号)由来する生物種エンティティの一般名
1A, B, G, H, M...DNA-directed RNA polymerase subunit alphapolymer24226899.66UniProt (A7ZSI4)
Pfam (PF01193)
Pfam (PF01000)
In PDB
Escherichia coliRNAP subunit alpha, RNA polymerase subunit alpha, Transcriptase subunit alpha
2C, I, ODNA-directed RNA polymerase subunit betapolymer1342150820.93UniProt (A7ZUK1)
Pfam (PF04563)
Pfam (PF04561)
Pfam (PF04565)
Pfam (PF10385)
Pfam (PF00562)
Pfam (PF04560)
In PDB
Escherichia coliRNAP subunit beta, RNA polymerase subunit beta, Transcriptase subunit beta
3D, J, PDNA-directed RNA polymerase subunit beta'polymer1407155366.83UniProt (A7ZUK2)
Pfam (PF04997)
Pfam (PF00623)
Pfam (PF04983)
Pfam (PF05000)
Pfam (PF04998)
UniProt (by SIFTS) (P0A8T7)
In PDB
Escherichia coliRNAP subunit beta', RNA polymerase subunit beta', Transcriptase subunit beta'
4E, K, QDNA-directed RNA polymerase subunit omegapolymer9010118.43UniProt (A7ZTK1)
Pfam (PF01192)
In PDB
Escherichia coliRNAP omega subunit, RNA polymerase omega subunit, Transcriptase subunit omega
5F, L, RRNA polymerase sigma factor RpoDpolymer62872206.33UniProt (P00579)
Pfam (PF03979)
Pfam (PF00140)
Pfam (PF04546)
Pfam (PF04542)
Pfam (PF04539)
Pfam (PF04545)
In PDB
Escherichia coliSigma-70
61, 4, 7NT strand DNA (49-MER)polymer4915024.63synthetic construct
72, 5, 8T strand DNA (49-MER)polymer4915233.83synthetic construct
83, 6, 9RNA (5'-D(*(GTP))-R(P*AP*GP*U)-3')polymer41440.83synthetic construct
9C, J, PMAGNESIUM IONnon-polymer24.33Chemie (MG)
10D, J, PZINC IONnon-polymer65.46Chemie (ZN)
配列変更
A, B, G, H, M, N: 1 - 235 (UniProt: A7ZSI4)
PDB外部データベース詳細
Ala -6-expression tag
His -5-expression tag
His -4-expression tag
His -3-expression tag
His -2-expression tag
His -1-expression tag
His 0-expression tag
F, L, R: 1 - 613 (UniProt: P00579)
PDB外部データベース詳細
Met -14-expression tag
Arg -13-expression tag
Gly -12-expression tag
Ser -11-expression tag
His -10-expression tag
His -9-expression tag
His -8-expression tag
His -7-expression tag
His -6-expression tag
His -5-expression tag
Thr -4-expression tag
Asp -3-expression tag
Gln -2-expression tag
Phe -1-expression tag
Thr 0-expression tag
配列ビューア
非対称単位の内容
タンパク質・
核酸鎖
鎖の数27
化学式量合計1422031.8
タンパク質・
核酸・
糖鎖以外*
分子数9
化学式量合計465.4
全て*化学式量合計1422497.2
*水分子は含んでいません

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件を2024-03-27に公開中

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