4D5L
Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated state
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | 1 | 18S RRNA 2 | polymer | 1869 | 602776.9 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 2 | A | 40S RIBOSOMAL PROTEIN ES26 | polymer | 295 | 32883.9 | 1 | Pfam (PF00318) Pfam (PF16122) UniProt (by SIFTS) (G1TLT8) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 3 | B | 40S RIBOSOMAL PROTEIN ES27 | polymer | 264 | 30002.1 | 1 | UniProt (G1SS70) Pfam (PF01015) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 4 | C | 40S RIBOSOMAL PROTEIN ES28 | polymer | 293 | 31376.5 | 1 | UniProt (by SIFTS) (G1SV32) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 5 | D | 40S RIBOSOMAL PROTEIN US14 | polymer | 243 | 26729.4 | 1 | Pfam (PF07650) Pfam (PF00189) UniProt (by SIFTS) (G1TNM3) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 6 | E | 40S RIBOSOMAL PROTEIN ES30 | polymer | 263 | 29512.8 | 1 | Pfam (PF16121) Pfam (PF08071) Pfam (PF00900) Pfam (PF00467) UniProt (by SIFTS) (G1TK17) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 7 | F | 40S RIBOSOMAL PROTEIN ES31 | polymer | 204 | 22913.5 | 1 | UniProt (G1TFM5) Pfam (PF00177) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 8 | G | 40S RIBOSOMAL PROTEIN RACK1 | polymer | 249 | 28751.9 | 1 | UniProt (G1TM55) Pfam (PF01092) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 9 | H | 40S RIBOSOMAL PROTEIN ES7 | polymer | 194 | 22168.9 | 1 | UniProt (G1SVB0) Pfam (PF01251) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 10 | I | 40S RIBOSOMAL PROTEIN ES8 | polymer | 208 | 24263.4 | 1 | Pfam (PF01201) UniProt (by SIFTS) (G1TJW1) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 11 | J | 40S RIBOSOMAL PROTEIN US4 | polymer | 194 | 22641.6 | 1 | UniProt (B7NZS8) Pfam (PF00163) Pfam (PF01479) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 12 | K | 40S RIBOSOMAL PROTEIN ES10 | polymer | 165 | 18933.8 | 1 | UniProt (G1TPV3) Pfam (PF03501) UniProt (by SIFTS) (G1T168) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 13 | L | 40S RIBOSOMAL PROTEIN US17 | polymer | 158 | 18468.8 | 1 | UniProt (G1TRM4) Pfam (PF16205) Pfam (PF00366) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 14 | M | 40S RIBOSOMAL PROTEIN ES12 | polymer | 132 | 14539.0 | 1 | UniProt (G1SFR8) Pfam (PF01248) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 15 | N | 40S RIBOSOMAL PROTEIN US15 | polymer | 151 | 17259.4 | 1 | UniProt (G1SP51) Pfam (PF08069) Pfam (PF00312) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 16 | O | 40S RIBOSOMAL PROTEIN US11 | polymer | 151 | 16302.8 | 1 | Pfam (PF00411) UniProt (by SIFTS) (G1T1F0) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 17 | P | 40S RIBOSOMAL PROTEIN US19 | polymer | 145 | 17076.2 | 1 | Pfam (PF00203) UniProt (by SIFTS) (G1U0Q2) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 18 | Q | 40S RIBOSOMAL PROTEIN US9 | polymer | 146 | 16477.4 | 1 | UniProt (G1SGX4) Pfam (PF00380) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 19 | R | 40S RIBOSOMAL PROTEIN ES17 | polymer | 135 | 15578.2 | 1 | Pfam (PF00833) UniProt (by SIFTS) (G1TU13) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 20 | S | 40S RIBOSOMAL PROTEIN US13 | polymer | 152 | 17759.8 | 1 | UniProt (G1TPG3) Pfam (PF00416) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 21 | T | 40S RIBOSOMAL PROTEIN ES19 | polymer | 145 | 16091.6 | 1 | Pfam (PF01090) UniProt (by SIFTS) (G1TN62) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 22 | U | 40S RIBOSOMAL PROTEIN US10 | polymer | 119 | 13398.8 | 1 | UniProt (G1SIZ2) Pfam (PF00338) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 23 | V | 40S RIBOSOMAL PROTEIN ES21 | polymer | 83 | 9124.4 | 1 | Pfam (PF01249) UniProt (by SIFTS) (G1TM82) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 24 | W | 40S RIBOSOMAL PROTEIN US8 | polymer | 130 | 14865.6 | 1 | UniProt (G1TG89) Pfam (PF00410) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 25 | X | 40S RIBOSOMAL PROTEIN US12 | polymer | 142 | 15713.5 | 1 | UniProt (G1SZ47) Pfam (PF00164) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 26 | Y | 40S RIBOSOMAL PROTEIN ES24 | polymer | 133 | 15463.3 | 1 | Pfam (PF01282) UniProt (by SIFTS) (G1TS40) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 27 | Z | 40S RIBOSOMAL PROTEIN ES25 | polymer | 125 | 13776.2 | 1 | UniProt (G1TDB3) Pfam (PF03297) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 28 | a | 40S RIBOSOMAL PROTEIN US2 | polymer | 115 | 13047.5 | 1 | Pfam (PF01283) UniProt (by SIFTS) (G1TFE8) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 29 | b | 40S RIBOSOMAL PROTEIN ES1 | polymer | 84 | 9480.2 | 1 | UniProt (G1TZ76) Pfam (PF01667) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 30 | c | 40S RIBOSOMAL PROTEIN US5 | polymer | 69 | 7855.1 | 1 | UniProt (G1TIB4) Pfam (PF01200) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 31 | d | 40S RIBOSOMAL PROTEIN US3 | polymer | 56 | 6690.8 | 1 | UniProt (G1U7M4) Pfam (PF00253) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 32 | e | 40S RIBOSOMAL PROTEIN ES4 | polymer | 59 | 6668.9 | 1 | Pfam (PF04758) UniProt (by SIFTS) (G1T8A2) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 33 | f | 40S RIBOSOMAL PROTEIN US7 | polymer | 156 | 18004.0 | 1 | UniProt (G1SK22) Pfam (PF00240) Pfam (PF01599) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 34 | g | 40S RIBOSOMAL PROTEIN ES6 | polymer | 317 | 35115.7 | 1 | UniProt (G1SJB4) Pfam (PF00400) In PDB | ORYCTOLAGUS CUNICULUS (RABBIT) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 34 |
| Total formula weight | 1221711.6 | |
| All* | Total formula weight | 1221711.6 |
