1MJH
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STRUCTURE-BASED ASSIGNMENT OF THE BIOCHEMICAL FUNCTION OF HYPOTHETICAL PROTEIN MJ0577: A TEST CASE OF STRUCTURAL GENOMICS
Descriptor:PROTEIN (ATP-BINDING DOMAIN OF PROTEIN MJ0577), MANGANESE (II) ION, ADENOSINE-5'-TRIPHOSPHATE
Authors:Zarembinski, T.I., Hung, L.-W., Mueller-Dieckmann, H.J., Kim, K.-K., Yokota, H., Kim, R., Kim, S.-H., Berkeley Structural Genomics Center (BSGC)
Deposit date:1998-11-04
Release date:1998-12-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure-based assignment of the biochemical function of a hypothetical protein: a test case of structural genomics.
Proc.Natl.Acad.Sci.USA, 95, 1998
1QU9
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1.2 A CRYSTAL STRUCTURE OF YJGF GENE PRODUCT FROM E. COLI
Descriptor:YJGF PROTEIN
Authors:Volz, K.
Deposit date:1999-07-07
Release date:1999-12-01
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:A test case for structure-based functional assignment: the 1.2 A crystal structure of the yjgF gene product from Escherichia coli
Protein Sci., 8, 1999
1JQU
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ARE CARBOXY TERMINII OF HELICES CODED BY THE LOCAL SEQUENCE OR BY TERTIARY STRUCTURE CONTACTS
Descriptor:Lysozyme
Authors:Sagermann, M., Martensson, L.-G., Baase, W.A., Matthews, B.W.
Deposit date:2001-08-08
Release date:2002-03-06
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A test of proposed rules for helix capping: Implications for protein design
Protein Sci., 11, 2002
1LLH
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ARE CARBOXY TERMINII OF HELICES CODED BY THE LOCAL SEQUENCE OR BY TERTIARY STRUCTURE CONTACTS
Descriptor:Lysozyme, CHLORIDE ION, BETA-MERCAPTOETHANOL
Authors:Sagermann, M., Martensson, L.-G., Baase, W.A., Matthews, B.W.
Deposit date:2002-04-28
Release date:2002-05-15
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A test of proposed rules for helix capping: Implications for protein design
Protein Sci., 11, 2002
1OB3
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STRUCTURE OF P. FALCIPARUM PFPK5
Descriptor:CELL DIVISION CONTROL PROTEIN 2 HOMOLOG
Authors:Holton, S., Merckx, A., Burgess, D., Doerig, C., Noble, M., Endicott, J.
Deposit date:2003-01-24
Release date:2004-01-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of P. Falciparum Pfpk5 Test the Cdk Regulation Paradigm and Suggest Mechanisms of Small Molecule Inhibition
Structure, 11, 2003
1TGG
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RH3 DESIGNED RIGHT-HANDED COILED COIL TRIMER
Descriptor:right-handed coiled coil trimer, NICKEL (II) ION, CHLORIDE ION
Authors:Plecs, J.J., Harbury, P.B., Kim, P.S., Alber, T.
Deposit date:2004-05-28
Release date:2004-10-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural test of the parameterized-backbone method for protein design
J.Mol.Biol., 342, 2004
1V0B
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CRYSTAL STRUCTURE OF THE T198A MUTANT OF PFPK5
Descriptor:CELL DIVISION CONTROL PROTEIN 2 HOMOLOG
Authors:Holton, S., Merckx, A., Burgess, D., Doerig, C., Noble, M., Endicott, J.
Deposit date:2004-03-26
Release date:2004-03-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of P. Falciparum Pfpk5 Test the Cdk Regulation Paradigm and Suggest Mechanisms of Small Molecule Inhibition
Structure, 11, 2003
1V0O
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STRUCTURE OF P. FALCIPARUM PFPK5-INDIRUBIN-5-SULPHONATE LIGAND COMPLEX
Descriptor:CELL DIVISION CONTROL PROTEIN 2 HOMOLOG, 2',3-DIOXO-1,1',2',3-TETRAHYDRO-2,3'-BIINDOLE-5'-SULFONIC ACID
Authors:Holton, S., Merckx, A., Burgess, D., Doerig, C., Noble, M., Endicott, J.
Deposit date:2004-03-31
Release date:2004-04-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of P. Falciparum Pfpk5 Test the Cdk Regulation Paradigm and Suggest Mechanisms of Small Molecule Inhibition
Structure, 11, 2003
1V0P
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STRUCTURE OF P. FALCIPARUM PFPK5-PURVALANOL B LIGAND COMPLEX
Descriptor:CELL DIVISION CONTROL PROTEIN 2 HOMOLOG, PURVALANOL B
Authors:Holton, S., Merckx, A., Burgess, D., Doerig, C., Noble, M., Endicott, J.
Deposit date:2004-04-01
Release date:2004-05-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of P. Falciparum Pfpk5 Test the Cdk Regulation Paradigm and Suggest Mechanisms of Small Molecule Inhibition
Structure, 11, 2003
3EGK
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KNOBLE INHIBITOR
Descriptor:Thrombin light chain, Thrombin heavy chain, Hirudin variant-1, ...
Authors:Baum, B., Heine, A., Klebe, G., Muenzel, M.
Deposit date:2008-09-10
Release date:2008-09-30
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:KNOBLE: a knowledge-based approach for the design and synthesis of readily accessible small-molecule chemical probes to test protein binding
Angew.Chem.Int.Ed.Engl., 46, 2007
3NDD
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CLEAVED ANTITRYPSIN WITH P10 PRO, AND P9-P6 ASP
Descriptor:Alpha-1-antitrypsin
Authors:Yamasaki, M., Sendall, T.J., Huntington, J.A.
Deposit date:2010-06-07
Release date:2010-07-28
Last modified:2017-06-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Loop-sheet mechanism of serpin polymerization tested by reactive center loop mutations
J. Biol. Chem., 285, 2010
3NDF
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CLEAVED ANTITRYPSIN WITH P8-P6 ASP
Descriptor:Alpha-1-antitrypsin
Authors:Huntington, J.A., Sendall, T.J., Yamasaki, M.
Deposit date:2010-06-07
Release date:2010-07-28
Last modified:2017-06-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Loop-sheet mechanism of serpin polymerization tested by reactive center loop mutations
J. Biol. Chem., 285, 2010
5FT3
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AEDES AEGYPTI GSTE2
Descriptor:GLUTATHIONE S-TRANSFERASE EPSILON 2, GLUTATHIONE
Authors:Yunta, C.
Deposit date:2016-01-11
Release date:2017-02-22
Method:X-RAY DIFFRACTION (1.431 Å)
Cite:A Simple Test for the Determination of Ddt on Sprayed Surfaces
To be Published
5KP1
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CRYSTAL STRUCTURE OF KETOSTEROID ISOMERASE FROM PSEUDOMONAS PUTIDA (PKSI) BOUND TO EQUILENIN; D40N, Y16(CL-Y)
Descriptor:Steroid Delta-isomerase, EQUILENIN, SULFATE ION
Authors:Wu, Y., Boxer, S.G.
Deposit date:2016-07-01
Release date:2016-09-07
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (1.218 Å)
Cite:A Critical Test of the Electrostatic Contribution to Catalysis with Noncanonical Amino Acids in Ketosteroid Isomerase.
J.Am.Chem.Soc., 138, 2016
5KP3
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CRYSTAL STRUCTURE OF KETOSTEROID ISOMERASE FROM PSEUDOMONAS PUTIDA (PKSI) BOUND TO EQUILENIN; D40N, Y57(CL-Y)
Descriptor:Steroid Delta-isomerase, EQUILENIN, SULFATE ION
Authors:Wu, Y., Boxer, S.G.
Deposit date:2016-07-01
Release date:2016-09-07
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A Critical Test of the Electrostatic Contribution to Catalysis with Noncanonical Amino Acids in Ketosteroid Isomerase.
J.Am.Chem.Soc., 138, 2016
5KP4
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CRYSTAL STRUCTURE OF KETOSTEROID ISOMERASE FROM PSEUDOMONAS PUTIDA (PKSI) BOUND TO 19-NORTESTOSTERONE
Descriptor:Steroid Delta-isomerase, (8~{R},9~{S},10~{R},13~{S},14~{S},17~{S})-13-methyl-17-oxidanyl-2,6,7,8,9,10,11,12,14,15,16,17-dodecahydro-1~{H}-cyclopenta[a]phenanthren-3-one
Authors:Wu, Y., Boxer, S.G.
Deposit date:2016-07-01
Release date:2016-09-07
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (1.706 Å)
Cite:A Critical Test of the Electrostatic Contribution to Catalysis with Noncanonical Amino Acids in Ketosteroid Isomerase.
J.Am.Chem.Soc., 138, 2016
1Y8W
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T-TO-T(HIGH) QUATERNARY TRANSITIONS IN HUMAN HEMOGLOBIN: ALPHAR92A OXY (2MM IHP, 20% PEG) (10 TEST SETS)
Descriptor:Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Kavanaugh, J.S., Rogers, P.H., Arnone, A.
Deposit date:2004-12-13
Release date:2005-01-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystallographic evidence for a new ensemble of ligand-induced allosteric transitions in hemoglobin: the T-to-T(high) quaternary transitions.
Biochemistry, 44, 2005
1YDZ
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T-TO-T(HIGH) QUATERNARY TRANSITIONS IN HUMAN HEMOGLOBIN: ALPHAY140F OXY (2MM IHP, 20% PEG) (1 TEST SET)
Descriptor:Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Kavanaugh, J.S., Rogers, P.H., Arnone, A.
Deposit date:2004-12-27
Release date:2005-01-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystallographic evidence for a new ensemble of ligand-induced allosteric transitions in hemoglobin: the T-to-T(high) quaternary transitions.
Biochemistry, 44, 2005
1YE0
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T-TO-T(HIGH) QUATERNARY TRANSITIONS IN HUMAN HEMOGLOBIN: BETAV33A OXY (2MM IHP, 20% PEG) (1 TEST SET)
Descriptor:Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Kavanaugh, J.S., Rogers, P.H., Arnone, A.
Deposit date:2004-12-27
Release date:2005-01-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystallographic evidence for a new ensemble of ligand-induced allosteric transitions in hemoglobin: the T-to-T(high) quaternary transitions.
Biochemistry, 44, 2005
1YE2
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T-TO-T(HIGH) QUATERNARY TRANSITIONS IN HUMAN HEMOGLOBIN: BETAY35F OXY (2MM IHP, 20% PEG) (1 TEST SET)
Descriptor:Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Kavanaugh, J.S., Rogers, P.H., Arnone, A.
Deposit date:2004-12-27
Release date:2005-01-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic evidence for a new ensemble of ligand-induced allosteric transitions in hemoglobin: the T-to-T(high) quaternary transitions.
Biochemistry, 44, 2005
1YEN
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T-TO-T(HIGH) QUATERNARY TRANSITIONS IN HUMAN HEMOGLOBIN: BETAP36A OXY (2MM IHP, 20% PEG) (10 TEST SETS)
Descriptor:Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Kavanaugh, J.S., Rogers, P.H., Arnone, A.
Deposit date:2004-12-28
Release date:2005-01-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystallographic evidence for a new ensemble of ligand-induced allosteric transitions in hemoglobin: the T-to-T(high) quaternary transitions.
Biochemistry, 44, 2005
1YEO
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T-TO-T(HIGH) QUATERNARY TRANSITIONS IN HUMAN HEMOGLOBIN: BETAW37A OXY (10 TEST SETS)
Descriptor:Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Kavanaugh, J.S., Rogers, P.H., Arnone, A.
Deposit date:2004-12-28
Release date:2005-02-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Crystallographic evidence for a new ensemble of ligand-induced allosteric transitions in hemoglobin: the T-to-T(high) quaternary transitions.
Biochemistry, 44, 2005
1YEQ
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T-TO-T(HIGH) QUATERNARY TRANSITIONS IN HUMAN HEMOGLOBIN: BETAW37Y OXY (10 TEST SETS)
Descriptor:Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Kavanaugh, J.S., Rogers, P.H., Arnone, A.
Deposit date:2004-12-28
Release date:2005-01-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystallographic evidence for a new ensemble of ligand-induced allosteric transitions in hemoglobin: the T-to-T(high) quaternary transitions.
Biochemistry, 44, 2005
1YEU
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T-TO-T(HIGH) QUATERNARY TRANSITIONS IN HUMAN HEMOGLOBIN: BETAW37G OXY (10 TEST SETS)
Descriptor:Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Kavanaugh, J.S., Rogers, P.H., Arnone, A.
Deposit date:2004-12-28
Release date:2005-01-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Crystallographic evidence for a new ensemble of ligand-induced allosteric transitions in hemoglobin: the T-to-T(high) quaternary transitions.
Biochemistry, 44, 2005
1YEV
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T-TO-T(HIGH) QUATERNARY TRANSITIONS IN HUMAN HEMOGLOBIN: BETAW37E OXY (10 TEST SETS)
Descriptor:Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Kavanaugh, J.S., Rogers, P.H., Arnone, A.
Deposit date:2004-12-28
Release date:2005-01-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Crystallographic evidence for a new ensemble of ligand-induced allosteric transitions in hemoglobin: the T-to-T(high) quaternary transitions.
Biochemistry, 44, 2005
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