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8CM5
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BU of 8cm5 by Molmil
W-formate dehydrogenase C872A from Desulfovibrio vulgaris
Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, DI(HYDROXYETHYL)ETHER, Formate dehydrogenase, ...
Authors:Vilela-Alves, G, Mota, C, Klymanska, K, Oliveira, A.R, Manuel, R.R, Pereira, I.C, Romao, M.J.
Deposit date:2023-02-17
Release date:2023-09-27
Last modified:2024-01-03
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:An allosteric redox switch involved in oxygen protection in a CO 2 reductase.
Nat.Chem.Biol., 20, 2024
8CM6
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BU of 8cm6 by Molmil
W-formate dehydrogenase C872A from Desulfovibrio vulgaris - with Formamide
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, CHLORIDE ION, ...
Authors:Vilela-Alves, G, Mota, C, Oliveira, A.R, Manuel, R.R, Pereira, I.C, Romao, M.J.
Deposit date:2023-02-17
Release date:2023-09-27
Last modified:2024-01-03
Method:X-RAY DIFFRACTION (1.416 Å)
Cite:An allosteric redox switch involved in oxygen protection in a CO 2 reductase.
Nat.Chem.Biol., 20, 2024
8CM4
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BU of 8cm4 by Molmil
W-formate dehydrogenase C872A from Desulfovibrio vulgaris - exposed to oxygen
Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, DI(HYDROXYETHYL)ETHER, Formate dehydrogenase, ...
Authors:Vilela-Alves, G, Mota, C, Klymanska, K, Oliveira, A.R, Manuel, R.R, Pereira, I.C, Romao, M.J.
Deposit date:2023-02-17
Release date:2023-09-27
Last modified:2024-01-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:An allosteric redox switch involved in oxygen protection in a CO 2 reductase.
Nat.Chem.Biol., 20, 2024
8CM7
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BU of 8cm7 by Molmil
W-formate dehydrogenase M405A from Desulfovibrio vulgaris
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, CHLORIDE ION, ...
Authors:Vilela-Alves, G, Mota, C, Oliveira, A.R, Manuel, R.R, Pereira, I.C, Romao, M.J.
Deposit date:2023-02-17
Release date:2023-09-27
Last modified:2024-01-03
Method:X-RAY DIFFRACTION (2.117 Å)
Cite:An allosteric redox switch involved in oxygen protection in a CO 2 reductase.
Nat.Chem.Biol., 20, 2024
8C0Z
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BU of 8c0z by Molmil
CryoEM structure of a tungsten-containing aldehyde oxidoreductase from Aromatoleum aromaticum
Descriptor: Aldehyde:ferredoxin oxidoreductase,tungsten-containing, BENZOIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Winiarska, A, Ramirez-Amador, F, Hege, D, Gemmecker, Y, Prinz, S, Hochberg, G, Heider, J, Szaleniec, M, Schuller, J.M.
Deposit date:2022-12-19
Release date:2023-05-31
Last modified:2023-06-14
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:A bacterial tungsten-containing aldehyde oxidoreductase forms an enzymatic decorated protein nanowire.
Sci Adv, 9, 2023
8BQL
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BU of 8bql by Molmil
W-formate dehydrogenase from Desulfovibrio vulgaris - Co-crystallized with Formate and Reoxidized by exposure to air for 12 min
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, Formate dehydrogenase, ...
Authors:Vilela-Alves, G, Mota, C, Oliveira, A.R, Manuel, R.R, Pereira, I.C, Romao, M.J.
Deposit date:2022-11-21
Release date:2023-01-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.906 Å)
Cite:Tracking W-Formate Dehydrogenase Structural Changes During Catalysis and Enzyme Reoxidation.
Int J Mol Sci, 24, 2022
8BQI
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BU of 8bqi by Molmil
W-formate dehydrogenase from Desulfovibrio vulgaris - Soaking with Formate 3 min
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, DI(HYDROXYETHYL)ETHER, ...
Authors:Vilela-Alves, G, Mota, C, Oliveira, A.R, Manuel, R.R, Pereira, I.C, Romao, M.J.
Deposit date:2022-11-21
Release date:2023-01-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.356 Å)
Cite:Tracking W-Formate Dehydrogenase Structural Changes During Catalysis and Enzyme Reoxidation.
Int J Mol Sci, 24, 2022
8BQG
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BU of 8bqg by Molmil
W-formate dehydrogenase from Desulfovibrio vulgaris - Soaking with Formate 1 min
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, DI(HYDROXYETHYL)ETHER, ...
Authors:Vilela-Alves, G, Mota, C, Oliveira, A.R, Manuel, R.R, Pereira, I.C, Romao, M.J.
Deposit date:2022-11-21
Release date:2023-01-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.946 Å)
Cite:Tracking W-Formate Dehydrogenase Structural Changes During Catalysis and Enzyme Reoxidation.
Int J Mol Sci, 24, 2022
8BQK
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BU of 8bqk by Molmil
W-formate dehydrogenase from Desulfovibrio vulgaris - Soaking with Formate 22 min
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, DI(HYDROXYETHYL)ETHER, ...
Authors:Vilela-Alves, G, Mota, C, Oliveira, A.R, Manuel, R.R, Pereira, I.C, Romao, M.J.
Deposit date:2022-11-21
Release date:2023-01-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.587 Å)
Cite:Tracking W-Formate Dehydrogenase Structural Changes During Catalysis and Enzyme Reoxidation.
Int J Mol Sci, 24, 2022
8BQJ
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BU of 8bqj by Molmil
W-formate dehydrogenase from Desulfovibrio vulgaris - Soaking with Formate 5 min
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, DI(HYDROXYETHYL)ETHER, ...
Authors:Vilela-Alves, G, Mota, C, Oliveira, A.R, Manuel, R.R, Pereira, I.C, Romao, M.J.
Deposit date:2022-11-21
Release date:2023-01-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.107 Å)
Cite:Tracking W-Formate Dehydrogenase Structural Changes During Catalysis and Enzyme Reoxidation.
Int J Mol Sci, 24, 2022
8BQH
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BU of 8bqh by Molmil
W-formate dehydrogenase from Desulfovibrio vulgaris - Soaking with Formate 1.5 min
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, CHLORIDE ION, ...
Authors:Vilela-Alves, G, Mota, C, Oliveira, A.R, Manuel, R.R, Pereira, I.C, Romao, M.J.
Deposit date:2022-11-21
Release date:2023-01-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Tracking W-Formate Dehydrogenase Structural Changes During Catalysis and Enzyme Reoxidation.
Int J Mol Sci, 24, 2022
7Z5O
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BU of 7z5o by Molmil
W-formate dehydrogenase from Desulfovibrio vulgaris - Dithionite reduced form
Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, DI(HYDROXYETHYL)ETHER, Formate dehydrogenase, ...
Authors:Mota, C, Oliveira, A.R, Klymanska, K, Pereira, I.C, Romao, M.J.
Deposit date:2022-03-09
Release date:2022-07-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.527 Å)
Cite:Spectroscopic and Structural Characterization of Reduced Desulfovibrio vulgaris Hildenborough W-FdhAB Reveals Stable Metal Coordination during Catalysis.
Acs Chem.Biol., 17, 2022
7QV7
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BU of 7qv7 by Molmil
Cryo-EM structure of Hydrogen-dependent CO2 reductase.
Descriptor: Hydrogen dependent carbon dioxide reductase subunit FdhF, Hydrogen dependent carbon dioxide reductase subunit HycB3, Hydrogen dependent carbon dioxide reductase subunit HycB4, ...
Authors:Dietrich, H.M, Righetto, R.D, Kumar, A, Wietrzynski, W, Schuller, S.K, Trischler, R, Wagner, J, Schwarz, F.M, Engel, B.D, Mueller, V, Schuller, J.M.
Deposit date:2022-01-19
Release date:2022-07-06
Last modified:2022-08-10
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Membrane-anchored HDCR nanowires drive hydrogen-powered CO 2 fixation.
Nature, 607, 2022
7B04
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BU of 7b04 by Molmil
Structure of Nitrite oxidoreductase (Nxr) from the anammox bacterium Kuenenia stuttgartiensis.
Descriptor: CALCIUM ION, FE3-S4 CLUSTER, IRON/SULFUR CLUSTER, ...
Authors:Moreno-Chicano, T, Dietl, A, Akram, M, Barends, T.R.M.
Deposit date:2020-11-18
Release date:2021-07-14
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (2.97 Å)
Cite:Structural and functional characterization of the intracellular filament-forming nitrite oxidoreductase multiprotein complex
Nat Microbiol, 2021
6X6U
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BU of 6x6u by Molmil
WOR5 from Pyrococcus furiosus, taurine-bound
Descriptor: 2-AMINOETHANESULFONIC ACID, CHLORIDE ION, Formaldehyde:ferredoxin oxidoreductase wor5, ...
Authors:Lanzilotta, W.N, Mathew, L.G.
Deposit date:2020-05-29
Release date:2021-12-15
Last modified:2022-12-07
Method:X-RAY DIFFRACTION (1.944 Å)
Cite:An unprecedented function for a tungsten-containing oxidoreductase.
J.Biol.Inorg.Chem., 27, 2022
6X1O
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BU of 6x1o by Molmil
WOR5 from Pyrococcus furiosus, as crystallized
Descriptor: (1R)-1-hydroxybutane-1-sulfonic acid, CHLORIDE ION, Formaldehyde:ferredoxin oxidoreductase wor5, ...
Authors:Mathew, L.G, Lanzilotta, W.N.
Deposit date:2020-05-19
Release date:2021-11-24
Last modified:2022-12-07
Method:X-RAY DIFFRACTION (2.094 Å)
Cite:An unprecedented function for a tungsten-containing oxidoreductase.
J.Biol.Inorg.Chem., 27, 2022
6SDV
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BU of 6sdv by Molmil
W-formate dehydrogenase from Desulfovibrio vulgaris - Formate reduced form
Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, DI(HYDROXYETHYL)ETHER, Formate dehydrogenase, ...
Authors:Oliveira, A.R, Mota, C, Mourato, C, Domingos, R.M, Santos, M.F.A, Gesto, D, Guigliarelli, B, Santos-Silva, T, Romao, M.J, Pereira, I.C.
Deposit date:2019-07-29
Release date:2020-03-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Towards the mechanistic understanding of enzymatic CO2 reduction
Acs Catalysis, 2020
6SDR
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BU of 6sdr by Molmil
W-formate dehydrogenase from Desulfovibrio vulgaris - Oxidized form
Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, Formate dehydrogenase, alpha subunit, ...
Authors:Oliveira, A.R, Mota, C, Mourato, C, Domingos, R.M, Santos, M.F.A, Gesto, D, Guigliarelli, B, Santos-Silva, T, Romao, M.J, Pereira, I.C.
Deposit date:2019-07-29
Release date:2020-03-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Towards the mechanistic understanding of enzymatic CO2 reduction
Acs Catalysis, 2020
6CZ7
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BU of 6cz7 by Molmil
The arsenate respiratory reductase (Arr) complex from Shewanella sp. ANA-3
Descriptor: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, 4Fe-4S ferredoxin, ...
Authors:Glasser, N.R, Newman, D.K.
Deposit date:2018-04-08
Release date:2018-08-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Structural and mechanistic analysis of the arsenate respiratory reductase provides insight into environmental arsenic transformations.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6CZ8
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BU of 6cz8 by Molmil
The arsenate respiratory reductase (Arr) complex from Shewanella sp. ANA-3 bound to arsenate
Descriptor: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, 4Fe-4S ferredoxin, ...
Authors:Glasser, N.R, Newman, D.K.
Deposit date:2018-04-08
Release date:2018-08-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structural and mechanistic analysis of the arsenate respiratory reductase provides insight into environmental arsenic transformations.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6CZA
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BU of 6cza by Molmil
The arsenate respiratory reductase (Arr) complex from Shewanella sp. ANA-3 bound to phosphate
Descriptor: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, 4Fe-4S ferredoxin, ...
Authors:Glasser, N.R, Newman, D.K.
Deposit date:2018-04-08
Release date:2018-08-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Structural and mechanistic analysis of the arsenate respiratory reductase provides insight into environmental arsenic transformations.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6CZ9
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BU of 6cz9 by Molmil
The arsenate respiratory reductase (Arr) complex from Shewanella sp. ANA-3 bound to arsenite
Descriptor: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, 4Fe-4S ferredoxin, ...
Authors:Glasser, N.R, Newman, D.K.
Deposit date:2018-04-08
Release date:2018-08-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and mechanistic analysis of the arsenate respiratory reductase provides insight into environmental arsenic transformations.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6F0K
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BU of 6f0k by Molmil
Alternative complex III
Descriptor: ActD, ActF, ActH, ...
Authors:Sousa, J.S, Calisto, F, Mills, D.J, Pereira, M.M, Vonck, J, Kuehlbrandt, W.
Deposit date:2017-11-20
Release date:2018-05-09
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.87 Å)
Cite:Structural basis for energy transduction by respiratory alternative complex III.
Nat Commun, 9, 2018
5E7O
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BU of 5e7o by Molmil
Crystal structure of the perchlorate reductase PcrAB mutant W461E of PcrA from Azospira suillum PS
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, DMSO reductase family type II enzyme, ...
Authors:Tsai, C.-L, Tainer, J.A.
Deposit date:2015-10-12
Release date:2016-03-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Perchlorate Reductase Is Distinguished by Active Site Aromatic Gate Residues.
J.Biol.Chem., 291, 2016
5CH7
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BU of 5ch7 by Molmil
Crystal structure of the perchlorate reductase PcrAB - Phe164 gate switch intermediate - from Azospira suillum PS
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, ACETATE ION, ...
Authors:Tsai, C.-L, Tainer, J.A.
Deposit date:2015-07-10
Release date:2016-03-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Perchlorate Reductase Is Distinguished by Active Site Aromatic Gate Residues.
J.Biol.Chem., 291, 2016

 

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PDB entries from 2024-03-27

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