Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6SWI
DownloadVisualize
BU of 6swi by Molmil
The C-terminal domain of AraT, a response regulator from Geobacillus stearothermophilus
Descriptor: Two-component response regulator
Authors:Lansky, S, Lavid, N, Shoham, Y, Shoham, G.
Deposit date:2019-09-21
Release date:2020-10-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:The C-terminal domain of AraT, a response regulator from Geobacillus stearothermophilus
To Be Published
3GBG
DownloadVisualize
BU of 3gbg by Molmil
Crystal Structure of ToxT from Vibrio Cholerae O395
Descriptor: PALMITOLEIC ACID, TCP pilus virulence regulatory protein
Authors:Lowden, M.J, Kull, F.J.
Deposit date:2009-02-19
Release date:2010-02-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of Vibrio cholerae ToxT reveals a mechanism for fatty acid regulation of virulence genes.
Proc.Natl.Acad.Sci.USA, 107, 2010
1BL0
DownloadVisualize
BU of 1bl0 by Molmil
MULTIPLE ANTIBIOTIC RESISTANCE PROTEIN (MARA)/DNA COMPLEX
Descriptor: DNA (5'-D(*CP*CP*GP*AP*TP*GP*CP*CP*AP*CP*GP*TP*TP*TP*TP*GP*CP*TP*AP*AP*AP*TP* CP*C)-3'), DNA (5'-D(*GP*GP*GP*GP*AP*TP*TP*TP*AP*GP*CP*AP*AP*AP*AP*CP*GP*TP*GP*GP*CP*AP* TP*C)-3'), PROTEIN (MULTIPLE ANTIBIOTIC RESISTANCE PROTEIN)
Authors:Davies, S, Rhee, R.G, Martin, J.L, Rosner, D.R.
Deposit date:1998-07-22
Release date:1998-09-02
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A novel DNA-binding motif in MarA: the first structure for an AraC family transcriptional activator.
Proc.Natl.Acad.Sci.USA, 95, 1998
4MLO
DownloadVisualize
BU of 4mlo by Molmil
1.65A resolution structure of ToxT from Vibrio cholerae (P21 Form)
Descriptor: CHLORIDE ION, PALMITOLEIC ACID, TCP pilus virulence regulatory protein
Authors:Lovell, S, Wehmeyer, G, Battaile, K.P, Li, J, Egan, S.
Deposit date:2013-09-06
Release date:2016-04-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:1.65 angstrom resolution structure of the AraC-family transcriptional activator ToxT from Vibrio cholerae.
Acta Crystallogr F Struct Biol Commun, 72, 2016
5NLA
DownloadVisualize
BU of 5nla by Molmil
Crystal structure of the AraC-like transcriptional activator CuxR
Descriptor: Putative transcriptional regulator TRANSCRIPTION REGULATOR protein
Authors:Steinchen, W.M, Altegoer, F, Bange, G.
Deposit date:2017-04-04
Release date:2017-05-31
Last modified:2017-06-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:AraC-like transcriptional activator CuxR binds c-di-GMP by a PilZ-like mechanism to regulate extracellular polysaccharide production.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3W6V
DownloadVisualize
BU of 3w6v by Molmil
Crystal structure of the DNA-binding domain of AdpA, the global transcriptional factor, in complex with a target DNA
Descriptor: AdpA, DNA (5'-D(*AP*GP*GP*TP*TP*GP*GP*CP*GP*GP*GP*TP*TP*CP*AP*C)-3'), DNA (5'-D(*CP*TP*GP*TP*GP*AP*AP*CP*CP*CP*GP*CP*CP*AP*AP*C)-3')
Authors:Yao, M.D, Ohtsuka, J, Nagata, K, Miyazono, K, Ohnishi, Y, Tanokura, M.
Deposit date:2013-02-22
Release date:2013-09-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Complex Structure of the DNA-binding Domain of AdpA, the Global Transcription Factor in Streptomyces griseus, and a Target Duplex DNA Reveals the Structural Basis of Its Tolerant DNA Sequence Specificity
J.Biol.Chem., 288, 2013
2K9S
DownloadVisualize
BU of 2k9s by Molmil
Solution structure of dna binding domain of E. coli arac
Descriptor: Arabinose operon regulatory protein
Authors:Rodgers, M.E, Schleif, R.F.
Deposit date:2008-10-23
Release date:2008-11-25
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of the DNA binding domain of AraC protein.
Proteins, 77, 2009
5SUW
DownloadVisualize
BU of 5suw by Molmil
Crystal Structure of ToxT from Vibrio Cholerae O395 bound to 3-(8-Methyl-1,2,3,4-tetrahydronaphthalen-1-yl)propanoic acid
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-[(1R)-8-methyl-1,2,3,4-tetrahydronaphthalen-1-yl]propanoic acid, TCP pilus virulence regulatory protein
Authors:Kull, F.J, Kelley, A.R.
Deposit date:2016-08-04
Release date:2017-04-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of ToxT from Vibrio Cholerae O395 bound to 3-(8-Methyl-1,2,3,4-tetrahydronaphthalen-1-yl)propanoic acid
To Be Published
5SUX
DownloadVisualize
BU of 5sux by Molmil
Crystal Structure of ToxT from Vibrio Cholerae O395 bound to (E)-4-(8-methylnaphthalen-1-yl)but-3-enoic acid
Descriptor: (3E)-4-(8-methylnaphthalen-1-yl)but-3-enoic acid, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, AraC family transcriptional regulator
Authors:Kull, F.J, Kelley, A.R.
Deposit date:2016-08-04
Release date:2017-04-12
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of ToxT from Vibrio Cholerae O395 bound to (E)-4-(8-methylnaphthalen-1-yl)but-3-enoic acid
To Be Published
6XIU
DownloadVisualize
BU of 6xiu by Molmil
ETEC Rns bound to a potential inhibitor, decanoic acid
Descriptor: DECANOIC ACID, Regulatory protein Rns
Authors:Midgett, C.R, Kull, F.J.
Deposit date:2020-06-22
Release date:2021-06-30
Last modified:2022-02-02
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the master regulator Rns reveals an inhibitor of enterotoxigenic Escherichia coli virulence regulons.
Sci Rep, 11, 2021
6XIV
DownloadVisualize
BU of 6xiv by Molmil
SeMet-Rns, in complex with potential inhibitor
Descriptor: (2S)-2-hydroxybutanedioic acid, DECANOIC ACID, Regulatory protein Rns
Authors:Midgett, C.R, Kull, F.J.
Deposit date:2020-06-22
Release date:2021-06-30
Last modified:2022-02-02
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the master regulator Rns reveals an inhibitor of enterotoxigenic Escherichia coli virulence regulons.
Sci Rep, 11, 2021
6P7R
DownloadVisualize
BU of 6p7r by Molmil
Crystal structure of unsaturated fatty acid bound wild-type ToxT from Vibrio cholerae strain SCE256
Descriptor: GLYCEROL, PALMITOLEIC ACID, Toxin co-regulated pilus virulence regulatory protein
Authors:Cruite, J.T, Kull, F.J.
Deposit date:2019-06-06
Release date:2020-01-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for virulence regulation inVibrio choleraeby unsaturated fatty acid components of bile.
Commun Biol, 2, 2019
6P7T
DownloadVisualize
BU of 6p7t by Molmil
Crystal structure of apo ToxT K231A from Vibrio cholerae strain SCE256
Descriptor: Toxin co-regulated pilus virulence regulatory protein
Authors:Cruite, J.T, Kull, F.J.
Deposit date:2019-06-06
Release date:2020-01-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for virulence regulation inVibrio choleraeby unsaturated fatty acid components of bile.
Commun Biol, 2, 2019
6PB9
DownloadVisualize
BU of 6pb9 by Molmil
Crystal structure of unsaturated fatty acid bound ToxT K231A from Vibrio cholerae strain SCE256
Descriptor: PALMITOLEIC ACID, Toxin co-regulated pilus virulence regulatory protein
Authors:Cruite, J.T, Kull, F.J.
Deposit date:2019-06-13
Release date:2020-01-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.109 Å)
Cite:Structural basis for virulence regulation inVibrio choleraeby unsaturated fatty acid components of bile.
Commun Biol, 2, 2019
3LSG
DownloadVisualize
BU of 3lsg by Molmil
The crystal structure of the C-terminal domain of the two-component response regulator yesN from Fusobacterium nucleatum subsp. nucleatum ATCC 25586
Descriptor: PHOSPHATE ION, Two-component response regulator yesN
Authors:Tan, K, Rakowski, E, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-02-12
Release date:2010-02-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.049 Å)
Cite:The crystal structure of the C-terminal domain of the two-component response regulator yesN from Fusobacterium nucleatum subsp. nucleatum ATCC 25586
To be Published
3MN2
DownloadVisualize
BU of 3mn2 by Molmil
The crystal structure of a probable AraC family transcriptional regulator from Rhodopseudomonas palustris CGA009
Descriptor: PHOSPHATE ION, probable AraC family transcriptional regulator
Authors:Tan, K, Li, H, Buck, K, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-04-20
Release date:2010-05-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of a probable AraC family transcriptional regulator from Rhodopseudomonas palustris CGA009
To be Published
3OIO
DownloadVisualize
BU of 3oio by Molmil
Crystal structure of transcriptional regulator (AraC-type DNA-binding domain-containing proteins) from Chromobacterium violaceum
Descriptor: CHLORIDE ION, SULFATE ION, Transcriptional regulator (AraC-type DNA-binding domain-containing proteins)
Authors:Chang, C, Mack, J, Feldman, B, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-08-19
Release date:2010-09-08
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of transcriptional regulator (AraC-type DNA-binding domain-containing proteins) from Chromobacterium violaceum
To be Published
3OOU
DownloadVisualize
BU of 3oou by Molmil
The structure of a protein with unkown function from Listeria innocua
Descriptor: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Lin2118 protein
Authors:Fan, Y, Mack, J, Feldman, B, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-08-31
Release date:2010-09-22
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:The structure of a protein with unkown function from Listeria innocua
To be Published
7R3W
DownloadVisualize
BU of 7r3w by Molmil
Crystal structure of the albicidin resistance protein STM3175 from Salmonella typhimurium
Descriptor: Putative bacterial regulatory helix-turn-helix protein
Authors:Dimos, N, Kosol, S, Suessmuth, R, Loll, B.
Deposit date:2022-02-08
Release date:2022-09-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Gene amplifications cause high-level resistance against albicidin in gram-negative bacteria.
Plos Biol., 21, 2023
1D5Y
DownloadVisualize
BU of 1d5y by Molmil
CRYSTAL STRUCTURE OF THE E. COLI ROB TRANSCRIPTION FACTOR IN COMPLEX WITH DNA
Descriptor: DNA (5'-D(*AP*CP*TP*TP*TP*GP*AP*CP*AP*TP*TP*CP*AP*GP*TP*GP*CP*TP*GP*TP*C)-3'), DNA (5'-D(*TP*GP*AP*CP*AP*GP*CP*AP*CP*TP*GP*AP*AP*TP*GP*TP*CP*AP*AP*AP*G)-3'), ROB TRANSCRIPTION FACTOR
Authors:Kwon, H.J, Bennik, M.H.J, Demple, B, Ellenberger, T.
Deposit date:1999-10-12
Release date:2000-04-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the Escherichia coli Rob transcription factor in complex with DNA.
Nat.Struct.Biol., 7, 2000
5CHH
DownloadVisualize
BU of 5chh by Molmil
Crystal structure of transcriptional regulator CdpR from Pseudomonas aeruginosa
Descriptor: AraC family transcriptional regulator
Authors:Zhao, J.R, Yu, X, Zhu, M, Kang, H.P, Kong, W.N, Ma, J.B, Deng, X, Gan, J.H, Liang, H.H.
Deposit date:2015-07-10
Release date:2016-05-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and Molecular Mechanism of CdpR Involved in Quorum-Sensing and Bacterial Virulence in Pseudomonas aeruginosa
Plos Biol., 14, 2016
1XS9
DownloadVisualize
BU of 1xs9 by Molmil
A MODEL OF THE TERNARY COMPLEX FORMED BETWEEN MARA, THE ALPHA-CTD OF RNA POLYMERASE AND DNA
Descriptor: 5'-D(P*AP*TP*GP*CP*CP*AP*CP*GP*TP*TP*TP*TP*GP*CP*TP*AP*AP*AP*TP*C)-3', 5'-D(P*GP*AP*TP*TP*TP*AP*GP*CP*AP*AP*AP*AP*CP*GP*TP*GP*GP*CP*AP*T)-3', DNA-directed RNA polymerase alpha chain, ...
Authors:Dangi, B, Gronenborn, A.M, Rosner, J.L, Martin, R.G.
Deposit date:2004-10-18
Release date:2004-10-26
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Versatility of the carboxy-terminal domain of the alpha subunit of RNA polymerase in transcriptional activation: use of the DNA contact site as a protein contact site for MarA.
Mol.Microbiol., 54, 2004
7VWY
DownloadVisualize
BU of 7vwy by Molmil
Cryo-EM structure of Rob-dependent transcription activation complex in a unique conformation
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Lin, W, Feng, Y.
Deposit date:2021-11-12
Release date:2022-06-08
Last modified:2023-06-07
Method:ELECTRON MICROSCOPY (4.57 Å)
Cite:Structural basis of transcription activation by Rob, a pleiotropic AraC/XylS family regulator.
Nucleic Acids Res., 50, 2022
7VWZ
DownloadVisualize
BU of 7vwz by Molmil
Cryo-EM structure of Rob-dependent transcription activation complex in a unique conformation
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Lin, W, Feng, Y, Shi, J.
Deposit date:2021-11-12
Release date:2022-06-08
Last modified:2022-06-22
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural basis of transcription activation by Rob, a pleiotropic AraC/XylS family regulator.
Nucleic Acids Res., 50, 2022
7BEF
DownloadVisualize
BU of 7bef by Molmil
Structures of class II bacterial transcription complexes
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Hao, M, Ye, F.Z, Zhang, X.D.
Deposit date:2020-12-23
Release date:2021-12-01
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structures of Class I and Class II Transcription Complexes Reveal the Molecular Basis of RamA-Dependent Transcription Activation.
Adv Sci, 9, 2022

 

12>

217705

PDB entries from 2024-03-27

PDB statisticsPDBj update infoContact PDBjnumon