PDB: 14 resultsInfo pagesStatus searchChemie searchBIRD

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4IX7	Crystal Structure of the insv-BEN domain complexed to its DNA target site Descriptor: 5'-D(*GP*TP*TP*CP*CP*AP*AP*TP*TP*GP*GP*AP*A)-3', RE55538p Authors: Ren, A, Serganov, A, Patel, D.J. Deposit date: 2013-01-24 Release date: 2013-03-20 Last modified: 2013-04-03 Method: X-RAY DIFFRACTION (1.581 Å) Cite: The BEN domain is a novel sequence-specific DNA-binding domain conserved in neural transcriptional repressors. Genes Dev., 27, 2013
4X0G	Structure of Bsg25A binding with DNA Descriptor: ACETATE ION, Blastoderm-specific gene 25A, DNA (5'-D(*GP*TP*TP*CP*CP*AP*AP*TP*TP*GP*GP*AP*A)-3') Authors: Ren, A. Deposit date: 2014-11-21 Release date: 2015-01-21 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (3.2065 Å) Cite: Common and distinct DNA-binding and regulatory activities of the BEN-solo transcription factor family. Genes Dev., 29, 2015
5JNO	Crystal structure of the BD1-NTPR complex from BEND3 and PICH Descriptor: BEN domain-containing protein 3, DNA excision repair protein ERCC-6-like, GLYCEROL Authors: Pitchai, G, Mesa, P, Hickson, I.D, Montoya, G. Deposit date: 2016-04-30 Release date: 2017-09-13 Last modified: 2019-10-16 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Crystal structure of the BD1-NTPR complex from BEND3 and PICH To Be Published
7BV9	The NMR structure of the BEN domain from human NAC1 Descriptor: Nucleus accumbens-associated protein 1 Authors: Nagata, T, Kobayashi, N, Nakayama, N, Obayashi, E, Urano, T. Deposit date: 2020-04-09 Release date: 2021-02-17 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: Nucleus Accumbens-Associated Protein 1 Binds DNA Directly through the BEN Domain in a Sequence-Specific Manner. Biomedicines, 8, 2020
7V9H	The BEN3 domain of protein Bend3 Descriptor: BEN domain-containing protein 3 Authors: Zhang, J, Zhang, Y, You, Q, Huang, C, Zhang, T, Wang, M, Zhang, T, Yang, X, Xiong, J, Li, Y, Liu, C.P, Zhang, Z, Xu, R.M, Zhu, B. Deposit date: 2021-08-25 Release date: 2022-02-16 Last modified: 2022-03-16 Method: X-RAY DIFFRACTION (2.692 Å) Cite: Highly enriched BEND3 prevents the premature activation of bivalent genes during differentiation. Science, 375, 2022
7V9F	Selenomethionine mutant (L740Sem) of BEN4 domain of protein Bend3 with DNA Descriptor: BEN domain-containing protein 3, CITRIC ACID, DNA (5'-D(*GP*CP*AP*CP*CP*GP*CP*GP*TP*GP*GP*GP*GP*CP*CP*A)-3'), ... Authors: Zhang, J, Zhang, Y, You, Q, Huang, C, Zhang, T, Wang, M, Zhang, T, Yang, X, Xiong, J, Li, Y, Liu, C.P, Zhang, Z, Xu, R.M, Zhu, B. Deposit date: 2021-08-25 Release date: 2022-02-16 Last modified: 2022-03-16 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Highly enriched BEND3 prevents the premature activation of bivalent genes during differentiation. Science, 375, 2022
7V9I	The Monomer mutant of BEN4 domain of protein Bend3 with DNA Descriptor: BEN domain-containing protein 3, DNA (5'-D(*AP*CP*CP*GP*CP*GP*TP*GP*GP*GP*GP*C)-3'), DNA (5'-D(*GP*CP*CP*CP*CP*AP*CP*GP*CP*GP*GP*T)-3') Authors: Zhang, J, Zhang, Y, You, Q, Huang, C, Zhang, T, Wang, M, Zhang, T, Yang, X, Xiong, J, Li, Y, Liu, C.P, Zhang, Z, Xu, R.M, Zhu, B. Deposit date: 2021-08-25 Release date: 2022-02-16 Last modified: 2022-03-16 Method: X-RAY DIFFRACTION (3.5 Å) Cite: Highly enriched BEND3 prevents the premature activation of bivalent genes during differentiation. Science, 375, 2022
7V9G	Native BEN4 domain of protein Bend3 with DNA Descriptor: BEN domain-containing protein 3, DNA (5'-D(*GP*CP*AP*CP*CP*GP*CP*GP*TP*GP*GP*GP*GP*CP*CP*A)-3'), DNA (5'-D(*TP*GP*GP*CP*CP*CP*CP*AP*CP*GP*CP*GP*GP*TP*GP*C)-3') Authors: Zhang, J, Zhang, Y, You, Q, Huang, C, Zhang, T, Wang, M, Zhang, T, Yang, X, Xiong, J, Li, Y, Liu, C.P, Zhang, Z, Xu, R.M, Zhu, B. Deposit date: 2021-08-25 Release date: 2022-02-16 Last modified: 2022-03-16 Method: X-RAY DIFFRACTION (3.5 Å) Cite: Highly enriched BEND3 prevents the premature activation of bivalent genes during differentiation. Science, 375, 2022
7W27	Crystal structure of BEND3-BEN4-DNA complex Descriptor: BEN domain-containing protein 3, DNA (5'-D(P*GP*GP*AP*CP*CP*CP*AP*CP*GP*CP*AP*GP*C)-3'), DNA (5'-D(P*GP*GP*CP*TP*GP*CP*GP*TP*GP*GP*GP*TP*C)-3') Authors: Zheng, L, Ren, A. Deposit date: 2021-11-22 Release date: 2022-02-23 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.49 Å) Cite: Distinct structural bases for sequence-specific DNA binding by mammalian BEN domain proteins. Genes Dev., 36, 2022
7YUL	Crystal structure of human BEND6 BEN domain in complex with DNA Descriptor: BEN domain-containing protein 6, DNA (5'-D(*CP*TP*CP*TP*CP*GP*CP*GP*AP*GP*AP*G)-3'), GLYCOLIC ACID Authors: Liu, K, Xiao, Y.Q, Zhang, J, Min, J.R. Deposit date: 2022-08-17 Release date: 2023-04-26 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.82 Å) Cite: Structural insights into DNA recognition by the BEN domain of the transcription factor BANP. J.Biol.Chem., 299, 2023
7YUG	Structure of human BANP BEN domain Descriptor: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, BROMIDE ION, CHLORIDE ION, ... Authors: Zhang, J, Xiao, Y.Q, Chen, Y.X, Liu, K, Min, J.R. Deposit date: 2022-08-17 Release date: 2023-04-26 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.1 Å) Cite: Structural insights into DNA recognition by the BEN domain of the transcription factor BANP. J.Biol.Chem., 299, 2023
7YUK	Complex structure of BANP BEN domain bound to DNA Descriptor: DNA (5'-D(*CP*TP*CP*TP*CP*GP*CP*GP*AP*GP*AP*G)-3'), GLYCEROL, Protein BANP Authors: Zhang, J, Xiao, Y.Q, Chen, Y.X, Liu, K, Min, J.R. Deposit date: 2022-08-17 Release date: 2023-04-26 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.11 Å) Cite: Structural insights into DNA recognition by the BEN domain of the transcription factor BANP. J.Biol.Chem., 299, 2023
7YUN	Crystal structure of human BEND6 BEN domain in complex with methylated DNA Descriptor: BEN domain-containing protein 6, DNA (5'-D(*CP*TP*CP*TP*CP*GP*(5CM)P*GP*AP*GP*AP*G)-3') Authors: Liu, K, Xiao, Y.Q, Zhang, J, Min, J.R. Deposit date: 2022-08-17 Release date: 2023-05-03 Last modified: 2023-05-31 Method: X-RAY DIFFRACTION (2.13 Å) Cite: Structural insights into DNA recognition by the BEN domain of the transcription factor BANP. J.Biol.Chem., 299, 2023
8HTX	Crystal structure of BANP in complex with methylated DNA Descriptor: DNA (5'-D(*CP*TP*CP*TP*(5CM)P*GP*CP*GP*AP*GP*AP*G)-3'), Protein BANP Authors: Zhang, J, Min, J, Liu, K. Deposit date: 2022-12-21 Release date: 2023-05-24 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Structural insights into DNA recognition by the BEN domain of the transcription factor BANP. J.Biol.Chem., 299, 2023