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6S36
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BU of 6s36 by Molmil
Crystal structure of E. coli Adenylate kinase R119K mutant
Descriptor: Adenylate kinase, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Grundstrom, C, Rogne, P, Wolf-Watz, M, Sauer-Eriksson, A.E.
Deposit date:2019-06-24
Release date:2019-08-07
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Nucleation of an Activating Conformational Change by a Cation-pi Interaction.
Biochemistry, 58, 2019
2EU8
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BU of 2eu8 by Molmil
Crystal structure of a thermostable mutant of Bacillus subtilis Adenylate Kinase (Q199R)
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, CALCIUM ION, ...
Authors:Chen, S, Shamoo, Y.
Deposit date:2005-10-28
Release date:2006-06-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:In vivo molecular evolution reveals biophysical origins of organismal fitness.
Mol.Cell, 22, 2006
4AKE
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BU of 4ake by Molmil
ADENYLATE KINASE
Descriptor: ADENYLATE KINASE
Authors:Schlauderer, G.J, Schulz, G.E.
Deposit date:1995-12-29
Release date:1996-06-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Adenylate kinase motions during catalysis: an energetic counterweight balancing substrate binding.
Structure, 4, 1996
3NDP
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BU of 3ndp by Molmil
Crystal structure of human AK4(L171P)
Descriptor: Adenylate kinase isoenzyme 4, SULFATE ION
Authors:Liu, R, Wang, Y, Wei, Z, Gong, W.
Deposit date:2010-06-07
Release date:2010-06-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of human adenylate kinase 4 (L171P) suggests the role of hinge region in protein domain motion
Biochem.Biophys.Res.Commun., 379, 2009
6RZE
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BU of 6rze by Molmil
Crystal structure of E. coli Adenylate kinase R119A mutant
Descriptor: Adenylate kinase, CHLORIDE ION, SODIUM ION
Authors:Grundstrom, C, Rogne, P, Wolf-Watz, M, Sauer-Eriksson, A.E.
Deposit date:2019-06-13
Release date:2019-08-07
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Nucleation of an Activating Conformational Change by a Cation-pi Interaction.
Biochemistry, 58, 2019
6F7U
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BU of 6f7u by Molmil
Molecular Mechanism of ATP versus GTP Selectivity of Adenylate Kinase
Descriptor: Adenylate kinase, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER
Authors:Rogne, P, Rosselin, M, Grundstrom, C, Hedberg, C, Wolf-Watz, M, Sauer, U.H.
Deposit date:2017-12-12
Release date:2018-03-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Molecular mechanism of ATP versus GTP selectivity of adenylate kinase.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5EJE
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BU of 5eje by Molmil
Crystal structure of E. coli Adenylate kinase G56C/T163C double mutant in complex with Ap5a
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, COBALT (II) ION
Authors:Sauer, U.H, Kovermann, M, Grundstrom, C, Wolf-Watz, M, Sauer-Eriksson, A.E.
Deposit date:2015-11-01
Release date:2016-11-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for ligand binding to an enzyme by a conformational selection pathway.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4K46
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BU of 4k46 by Molmil
Crystal Structure of Adenylate Kinase from Photobacterium profundum
Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase, ...
Authors:Cho, Y.-J, Kerns, S.J, Kern, D.
Deposit date:2013-04-12
Release date:2014-07-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Alike but Different: Adenylate kinases from E. Coli, Aquifex, and P. profundum
To be Published
5X6I
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BU of 5x6i by Molmil
Crystal structure of B. subtilis adenylate kinase variant
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, CALCIUM ION, ...
Authors:Moon, S, Bae, E.
Deposit date:2017-02-22
Release date:2018-02-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and mutational analyses of psychrophilic and mesophilic adenylate kinases highlight the role of hydrophobic interactions in protein thermal stability.
Struct Dyn., 6, 2019
5X6J
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BU of 5x6j by Molmil
Crystal structure of B. globisporus adenylate kinase variant
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, ZINC ION
Authors:Moon, S, Bae, E.
Deposit date:2017-02-22
Release date:2018-02-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and mutational analyses of psychrophilic and mesophilic adenylate kinases highlight the role of hydrophobic interactions in protein thermal stability.
Struct Dyn., 6, 2019
6HAP
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BU of 6hap by Molmil
Adenylate kinase
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE
Authors:Kantaev, R, Inbal, R, Goldenzweig, A, Barak, Y, Dym, O, Peleg, Y, Albek, S, Fleishman, S.J, Haran, G.
Deposit date:2018-08-08
Release date:2019-08-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Manipulating the Folding Landscape of a Multidomain Protein.
J.Phys.Chem.B, 122, 2018
8BQF
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BU of 8bqf by Molmil
Adenylate Kinase L107I MUTANT
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE
Authors:Scheerer, D, Adkar, B.V, Bhattacharyya, S, Levy, D, Iljina, M, Iljina, I, Dym, O, Haran, G, Shakhnovich, E.I.
Deposit date:2022-11-21
Release date:2023-05-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Allosteric communication between ligand binding domains modulates substrate inhibition in adenylate kinase.
Proc.Natl.Acad.Sci.USA, 120, 2023
1P3J
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BU of 1p3j by Molmil
Adenylate Kinase from Bacillus subtilis
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ...
Authors:Bae, E, Phillips Jr, G.N.
Deposit date:2003-04-17
Release date:2004-05-04
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures and analysis of highly homologous psychrophilic, mesophilic, and thermophilic adenylate kinases.
J.Biol.Chem., 279, 2004
3TLX
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BU of 3tlx by Molmil
Crystal Structure of PF10_0086, adenylate kinase from plasmodium falciparum
Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Wernimont, A.K, Loppnau, P, Crombet, L, Weadge, J, Perieteanu, A, Edwards, A.M, Arrowsmith, C.H, Park, H, Bountra, C, Hui, R, Amani, M, Structural Genomics Consortium (SGC)
Deposit date:2011-08-30
Release date:2011-10-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal Structure of PF10_0086, adenylate kinase from plasmodium falciparum
TO BE PUBLISHED
6HAM
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BU of 6ham by Molmil
Adenylate kinase
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE
Authors:Kantaev, R, Inbal, R, Goldenzweig, A, Barak, Y, Dym, O, Peleg, Y, Albek, S, Fleishman, S.J, Haran, G.
Deposit date:2018-08-08
Release date:2019-08-28
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Manipulating the Folding Landscape of a Multidomain Protein.
J.Phys.Chem.B, 122, 2018
8CRG
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BU of 8crg by Molmil
E. coli adenylate kinase in complex with two ADP molecules as a result of enzymatic AP4A hydrolysis
Descriptor: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
Authors:Oelker, M, Tischlik, S, Wolf-Watz, M, Sauer-Eriksson, A.E.
Deposit date:2023-03-08
Release date:2023-06-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Insights into Enzymatic Catalysis from Binding and Hydrolysis of Diadenosine Tetraphosphate by E. coli Adenylate Kinase.
Biochemistry, 62, 2023
1S3G
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BU of 1s3g by Molmil
Crystal structure of adenylate kinase from Bacillus globisporus
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, ZINC ION
Authors:Bae, E, Phillips Jr, G.N.
Deposit date:2004-01-13
Release date:2004-05-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structures and analysis of highly homologous psychrophilic, mesophilic, and thermophilic adenylate kinases.
J.Biol.Chem., 279, 2004
3X2S
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BU of 3x2s by Molmil
Crystal structure of pyrene-conjugated adenylate kinase
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ...
Authors:Fujii, A, Sekiguchi, Y, Matsumura, H, Inoue, T, Chung, W.-S, Hirota, S, Matsuo, T.
Deposit date:2014-12-31
Release date:2015-04-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Excimer Emission Properties on Pyrene-Labeled Protein Surface: Correlation between Emission Spectra, Ring Stacking Modes, and Flexibilities of Pyrene Probes.
Bioconjug.Chem., 26, 2015
3GMT
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BU of 3gmt by Molmil
Crystal structure of adenylate kinase from burkholderia pseudomallei
Descriptor: Adenylate kinase, SULFATE ION
Authors:Abendroth, J, Staker, B.L, Robinson, H, Buchko, G.W, Hewitt, S.N, Napuli, A.J, Van Voorhis, W, Stacy, R, Myler, P.J, Stewart, L, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2009-03-15
Release date:2009-06-02
Last modified:2013-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural characterization of Burkholderia pseudomallei adenylate kinase (Adk): profound asymmetry in the crystal structure of the 'open' state.
Biochem.Biophys.Res.Commun., 394, 2010
1DVR
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BU of 1dvr by Molmil
STRUCTURE OF A MUTANT ADENYLATE KINASE LIGATED WITH AN ATP-ANALOGUE SHOWING DOMAIN CLOSURE OVER ATP
Descriptor: ADENYLATE KINASE, PHOSPHODIFLUOROMETHYLPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Schlauderer, G.J, Schulz, G.E.
Deposit date:1995-12-14
Release date:1996-04-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structure of a mutant adenylate kinase ligated with an ATP-analogue showing domain closure over ATP.
J.Mol.Biol., 256, 1996
1E4Y
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BU of 1e4y by Molmil
Mutant P9L of adenylate kinase from E. coli, modified in the Gly-loop
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE
Authors:Mueller, C.W, Schulz, G.E.
Deposit date:2000-07-12
Release date:2000-08-04
Last modified:2018-11-21
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structures of two mutants of adenylate kinase from Escherichia coli that modify the Gly-loop.
Proteins, 15, 1993
1E4V
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BU of 1e4v by Molmil
Mutant G10V of adenylate kinase from E. coli, modified in the Gly-loop
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE
Authors:Mueller, C.W, Schulz, G.E.
Deposit date:2000-07-12
Release date:2000-08-04
Last modified:2018-09-19
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structures of two mutants of adenylate kinase from Escherichia coli that modify the Gly-loop.
Proteins, 15, 1993
3HPQ
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BU of 3hpq by Molmil
Crystal structure of wild-type adenylate kinase from E. coli, in complex with Ap5A
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE
Authors:Hilser, V.J, Travis, T.P, Bolen, D.W.
Deposit date:2009-06-04
Release date:2009-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Rational modulation of conformational fluctuations in adenylate kinase reveals a local unfolding mechanism for allostery and functional adaptation in proteins.
Proc.Natl.Acad.Sci.USA, 106, 2009
3HPR
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BU of 3hpr by Molmil
Crystal structure of V148G adenylate kinase from E. coli, in complex with Ap5A
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE
Authors:Hilser, V.J, Travis, T.P, Bolen, D.W.
Deposit date:2009-06-04
Release date:2009-11-03
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Rational modulation of conformational fluctuations in adenylate kinase reveals a local unfolding mechanism for allostery and functional adaptation in proteins.
Proc.Natl.Acad.Sci.USA, 106, 2009
4X8H
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BU of 4x8h by Molmil
Crystal structure of E. coli Adenylate kinase P177A mutant
Descriptor: Adenylate kinase
Authors:Sauer-Eriksson, A.E, Kovermann, M, Aden, J, Grundstrom, C, Wolf-Watz, M, Sauer, U.H.
Deposit date:2014-12-10
Release date:2015-07-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for catalytically restrictive dynamics of a high-energy enzyme state.
Nat Commun, 6, 2015

 

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