Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1Z8M
DownloadVisualize
BU of 1z8m by Molmil
Solution structure of the conserved hypothtical protein HP0894 from Helicobacter pylori
Descriptor: conserved hypothetical protein HP0894
Authors:Han, K.D, Park, S.J, Jang, S.B, Lee, B.J.
Deposit date:2005-03-30
Release date:2005-11-01
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of conserved hypothetical protein HP0894 from Helicobacter pylori
Proteins, 61, 2005
2OTR
DownloadVisualize
BU of 2otr by Molmil
Solution Structure of Conserved Hypothetical Protein HP0892 from Helicobacter pylori
Descriptor: Hypothetical protein HP0892
Authors:Han, K.D, Park, S.J, Jang, S.B, Lee, B.J.
Deposit date:2007-02-09
Release date:2007-12-18
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of conserved hypothetical protein HP0892 from Helicobacter pylori.
Proteins, 70, 2007
8C26
DownloadVisualize
BU of 8c26 by Molmil
ParDE2 toxin-antitoxin complex from Mycobacterium tuberculosis (rv2142A-rv2142c)
Descriptor: Antitoxin ParD2, CHLORIDE ION, Toxin ParE2
Authors:Beck, I.N, Blower, T.R.
Deposit date:2022-12-21
Release date:2023-12-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Toxin release by conditional remodelling of ParDE1 from Mycobacterium tuberculosis leads to gyrase inhibition.
Nucleic Acids Res., 52, 2024
4FXH
DownloadVisualize
BU of 4fxh by Molmil
Crystal structure of the isolated E. coli RelE toxin, P212121 form
Descriptor: SULFATE ION, mRNA interferase RelE
Authors:Brodersen, D.E, Boggild, A, Sofos, N.
Deposit date:2012-07-03
Release date:2012-08-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure of the intact E. coli RelBE toxin-antitoxin complex provides the structural basis for conditional cooperativity.
Structure, 20, 2012
4FXI
DownloadVisualize
BU of 4fxi by Molmil
Crystal structure of the isolated E. coli RelE toxin, P21 form
Descriptor: SULFATE ION, mRNA interferase RelE
Authors:Brodersen, D.E, Boggild, A, Sofos, N.
Deposit date:2012-07-03
Release date:2012-08-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8003 Å)
Cite:The crystal structure of the intact E. coli RelBE toxin-antitoxin complex provides the structural basis for conditional cooperativity.
Structure, 20, 2012
2KHE
DownloadVisualize
BU of 2khe by Molmil
Solution Structure of the Bacterial Toxin Rele from Thermus Thermophilus HB8
Descriptor: Toxin-like protein
Authors:Suzuki, S, Kawazoe, M, Kaminishi, T, Takemoto, C, Muto, Y, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-04-03
Release date:2010-03-31
Last modified:2021-11-10
Method:SOLUTION NMR
Cite:Solution Structure of the Bacterial Toxin Rele from Thermus Thermophilus HB8
To be Published
2KC9
DownloadVisualize
BU of 2kc9 by Molmil
Structure of E. coli toxin RelE (R81A/R83A) mutant in the free state
Descriptor: Toxin relE
Authors:Li, G, Zhang, Y, Inouye, M, Ikura, M.
Deposit date:2008-12-17
Release date:2009-03-17
Last modified:2021-10-20
Method:SOLUTION NMR
Cite:Inhibitory mechanism of Escherichia coli RelE-RelB toxin-antitoxin module involves a helix displacement near an mRNA interferase active site.
J.Biol.Chem., 284, 2009
4LTT
DownloadVisualize
BU of 4ltt by Molmil
Crystal structure of native apo toxin from Helicobacter pylori
Descriptor: Uncharacterized protein, toxin
Authors:Lee, B.J, Im, H, Pathak, C.C, Yoon, H.J.
Deposit date:2013-07-23
Release date:2014-02-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Crystal structure of apo and copper bound HP0894 toxin from Helicobacter pylori 26695 and insight into mRNase activity
Biochim.Biophys.Acta, 1834, 2013
4LS4
DownloadVisualize
BU of 4ls4 by Molmil
Crystal structure of L66S mutant toxin from Helicobacter pylori
Descriptor: BROMIDE ION, Uncharacterized protein, Toxin
Authors:Pathak, C.C, Im, H, Lee, B.J, Yoon, H.J.
Deposit date:2013-07-22
Release date:2014-02-05
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Crystal structure of apo and copper bound HP0894 toxin from Helicobacter pylori 26695 and insight into mRNase activity
Biochim.Biophys.Acta, 1834, 2013
4LSY
DownloadVisualize
BU of 4lsy by Molmil
Crystal structure of copper-bound L66S mutant toxin from Helicobacter pylori
Descriptor: CITRATE ANION, COPPER (II) ION, Uncharacterized protein, ...
Authors:Lee, B.J, Im, H, Pathak, C.C, Yoon, H.J.
Deposit date:2013-07-23
Release date:2014-02-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.895 Å)
Cite:Crystal structure of apo and copper bound HP0894 toxin from Helicobacter pylori 26695 and insight into mRNase activity
Biochim.Biophys.Acta, 1834, 2013
5CZE
DownloadVisualize
BU of 5cze by Molmil
Crystal structure of the PaaA2-ParE2 antitoxin-toxin complex
Descriptor: PaaA2, Plasmid stabilization protein ParE
Authors:Loris, R, Sterckx, Y.G.J.
Deposit date:2015-07-31
Release date:2016-08-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.82 Å)
Cite:A unique hetero-hexadecameric architecture displayed by the Escherichia coli O157 PaaA2-ParE2 antitoxin-toxin complex.
J.Mol.Biol., 428, 2016
4NRN
DownloadVisualize
BU of 4nrn by Molmil
Crystal structure of metal-bound toxin from Helicobacter pylori
Descriptor: ZINC ION, metal-bound toxin
Authors:Lee, B.J, Im, H, Pathak, C, Jang, S.B.
Deposit date:2013-11-27
Release date:2014-10-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:Crystal structure of toxin HP0892 from Helicobacter pylori with two Zn(II) at 1.8 angstrom resolution
Protein Sci., 23, 2014
3BPQ
DownloadVisualize
BU of 3bpq by Molmil
Crystal Structure of RelB-RelE antitoxin-toxin complex from Methanococcus jannaschii
Descriptor: Antitoxin RelB3, Toxin RelE3
Authors:Francuski, D, Saenger, W.
Deposit date:2007-12-19
Release date:2008-12-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the antitoxin-toxin protein complex RelB-RelE from Methanococcus jannaschii
J.Mol.Biol., 393, 2009
1WMI
DownloadVisualize
BU of 1wmi by Molmil
Crystal structure of archaeal RelE-RelB complex from Pyrococcus horikoshii OT3
Descriptor: hypothetical protein PHS013, hypothetical protein PHS014
Authors:Takagi, H, Kakuta, Y, Kamachi, R, Yao, M, Tanaka, I, Kimura, M.
Deposit date:2004-07-09
Release date:2005-03-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of archaeal toxin-antitoxin RelE-RelB complex with implications for toxin activity and antitoxin effects
Nat.Struct.Mol.Biol., 12, 2005
5CW7
DownloadVisualize
BU of 5cw7 by Molmil
Crystal structure of the PaaA2-ParE2 antitoxin-toxin complex
Descriptor: GLYCEROL, PAAA2, Plasmid stabilization protein ParE
Authors:Sterckx, Y.G.-J, Loris, R.
Deposit date:2015-07-27
Release date:2016-06-01
Method:X-RAY DIFFRACTION (2.827 Å)
Cite:A unique hetero-hexadecameric architecture displayed by the Escherichia coli O157 PaaA2-ParE2 antitoxin-toxin complex.
J.Mol.Biol., 428, 2016
5CZF
DownloadVisualize
BU of 5czf by Molmil
Crystal structure of the PaaA2-ParE2 antitoxin-toxin complex
Descriptor: PaaA2, Plasmid stabilization protein ParE, SULFATE ION
Authors:Loris, R, Sterckx, Y.G.J.
Deposit date:2015-07-31
Release date:2016-06-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.671 Å)
Cite:A unique hetero-hexadecameric architecture displayed by the Escherichia coli O157 PaaA2-ParE2 antitoxin-toxin complex.
J.Mol.Biol., 428, 2016
7R5A
DownloadVisualize
BU of 7r5a by Molmil
Vibrio cholera ParD2:ParE2 antitoxin:toxin complex
Descriptor: Antitoxin ParD, Toxin
Authors:Garcia-Rodriguez, G, Loris, R.
Deposit date:2022-02-10
Release date:2022-04-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Toxin:antitoxin ratio sensing autoregulation of the Vibrio cholerae parDE2 module.
Sci Adv, 10, 2024
7ETR
DownloadVisualize
BU of 7etr by Molmil
Crystal structure of SO_1444-SO_1445 complex from Shewanella oneidensis
Descriptor: Toxin module of toxin-antitoxin system RelE/StbE family, Transcriptional regulator CopG family
Authors:Zhou, J, Zhang, H.
Deposit date:2021-05-13
Release date:2022-03-23
Method:X-RAY DIFFRACTION (3.804 Å)
Cite:Insights into the Neutralization and DNA Binding of Toxin-Antitoxin System ParE SO-CopA SO by Structure-Function Studies.
Microorganisms, 9, 2021
4V7J
DownloadVisualize
BU of 4v7j by Molmil
Structure of RelE nuclease bound to the 70S ribosome (precleavage state)
Descriptor: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
Authors:Neubauer, C, Gao, Y.-G, Andersen, K.R, Dunham, C.M, Kelley, A.C, Hentschel, J, Gerdes, K, Ramakrishnan, V, Brodersen, D.E.
Deposit date:2009-11-02
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:The structural basis for mRNA recognition and cleavage by the ribosome-dependent endonuclease RelE.
Cell(Cambridge,Mass.), 139, 2009
4V7K
DownloadVisualize
BU of 4v7k by Molmil
Structure of RelE nuclease bound to the 70S ribosome (postcleavage state)
Descriptor: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
Authors:Neubauer, C, Gao, Y.-G, Andersen, K.R, Dunham, C.M, Kelley, A.C, Hentschel, J, Gerdes, K, Ramakrishnan, V, Brodersen, D.E.
Deposit date:2009-11-02
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:The structural basis for mRNA recognition and cleavage by the ribosome-dependent endonuclease RelE.
Cell(Cambridge,Mass.), 139, 2009
3G5O
DownloadVisualize
BU of 3g5o by Molmil
The crystal structure of the toxin-antitoxin complex RelBE2 (Rv2865-2866) from Mycobacterium tuberculosis
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Miallau, L, Cascio, D, Eisenberg, D, TB Structural Genomics Consortium (TBSGC), Integrated Center for Structure and Function Innovation (ISFI)
Deposit date:2009-02-05
Release date:2009-04-14
Last modified:2022-11-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Comparative proteomics identifies the cell-associated lethality of M. tuberculosis RelBE-like toxin-antitoxin complexes.
Structure, 21, 2013
6X0A
DownloadVisualize
BU of 6x0a by Molmil
X-ray structure of a chimeric ParDE toxin-antitoxin complex from Mesorhizobium opportunistum
Descriptor: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, Plasmid stabilization system, Putative addiction module antidote protein, ...
Authors:Lite, T.L, Grant, R.A, Laub, M.T.
Deposit date:2020-05-15
Release date:2020-11-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Uncovering the basis of protein-protein interaction specificity with a combinatorially complete library.
Elife, 9, 2020
8C24
DownloadVisualize
BU of 8c24 by Molmil
ParDE1 toxin-antitoxin complex from Mycobacterium tuberculosis (rv1960c-rv1959c)
Descriptor: Antitoxin ParD1, Toxin ParE1
Authors:Beck, I.N, Blower, T.R.
Deposit date:2022-12-21
Release date:2023-12-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Toxin release by conditional remodelling of ParDE1 from Mycobacterium tuberculosis leads to gyrase inhibition.
Nucleic Acids Res., 52, 2024
6XRW
DownloadVisualize
BU of 6xrw by Molmil
Chromosomal ParDE TA system from P. aeruginosa
Descriptor: BENZAMIDINE, GLYCEROL, NONAETHYLENE GLYCOL, ...
Authors:Bourne, C.R, Snead, K.J, Thomas, L.M.
Deposit date:2020-07-13
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:ParD Antitoxin Hotspot Alters a Disorder-to-Order Transition upon Binding to Its Cognate ParE Toxin, Lessening Its Interaction Affinity and Increasing Its Protease Degradation Kinetics.
Biochemistry, 61, 2022
7YCS
DownloadVisualize
BU of 7ycs by Molmil
Heterotetramer of Antitoxin PrpA together with Toxin PrpT from Pseudoalteromonas rubra
Descriptor: Antitoxin ParD, Toxin
Authors:Wang, C.C, Niu, L.W.
Deposit date:2022-07-01
Release date:2022-09-21
Last modified:2023-04-19
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structural insights into the PrpTA toxin-antitoxin system in Pseudoalteromonas rubra.
Front Microbiol, 13, 2022

 

12>

217705

PDB entries from 2024-03-27

PDB statisticsPDBj update infoContact PDBjnumon