2MTV
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SOLUTION STRUCTURE OF THE YTH DOMAIN OF YT521-B IN COMPLEX WITH N6-METHYLADENOSINE CONTAINING RNA
Descriptor:YTH domain-containing protein 1, RNA_(5'-R(*UP*GP*(6MZ)P*CP*AP*C)-3')
Authors:Theler, D., Dominguez, C., Blatter, M., Boudet, J., Allain, F.H.-T.
Deposit date:2014-09-01
Release date:2014-11-26
Last modified:2014-12-31
Method:SOLUTION NMR
Cite:Solution structure of the YTH domain in complex with N6-methyladenosine RNA: a reader of methylated RNA.
Nucleic Acids Res., 42, 2014
2YU6
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SOLUTION STRUCTURE OF THE YTH DOMAIN IN YTH DOMAIN-CONTAINING PROTEIN 2
Descriptor:YTH domain-containing protein 2
Authors:Endo, R., Muto, Y., Inoue, M., Kigawa, T., Shirouzu, M., Tarada, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-05
Release date:2007-10-09
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the YTH domain in YTH domain-containing protein 2
To be Published
2YUD
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SOLUTION STRUCTURE OF THE YTH DOMAIN IN YTH DOMAIN-CONTAINING PROTEIN 1 (PUTATIVE SPLICING FACTOR YT521)
Descriptor:YTH domain-containing protein 1
Authors:He, F., Muto, Y., Inoue, M., Kigawa, T., Shirouzu, M., Tarada, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-06
Release date:2007-10-09
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the YTH domain in YTH domain-containing protein 1 (Putative splicing factor YT521)
To be Published
4R3H
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THE CRYSTAL STRUCTURE OF AN APO RNA BINDING PROTEIN
Descriptor:YTH domain-containing protein 1, UNKNOWN ATOM OR ION, SULFATE ION
Authors:Xu, C., Liu, K., Tempel, W., Li, Y., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
Deposit date:2014-08-15
Release date:2014-09-17
Last modified:2014-11-19
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for selective binding of m(6)A RNA by the YTHDC1 YTH domain.
Nat.Chem.Biol., 10, 2014
4R3I
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THE CRYSTAL STRUCTURE OF AN RNA COMPLEX
Descriptor:YTH domain-containing protein 1, RNA (5'-R(*GP*GP*(6MZ)P*CP*U)-3'), UNKNOWN ATOM OR ION
Authors:Tempel, W., Xu, C., Liu, K., Li, Y., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
Deposit date:2014-08-15
Release date:2014-09-17
Last modified:2014-11-19
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for selective binding of m(6)A RNA by the YTHDC1 YTH domain.
Nat.Chem.Biol., 10, 2014
4RCI
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CRYSTAL STRUCTURE OF YTHDF1 YTH DOMAIN
Descriptor:YTH domain-containing family protein 1, UNKNOWN ATOM OR ION
Authors:Xu, C., Tempel, W., Liu, K., Walker, J.R., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
Deposit date:2014-09-16
Release date:2014-10-01
Last modified:2015-10-21
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural Basis for the Discriminative Recognition of N6-Methyladenosine RNA by the Human YT521-B Homology Domain Family of Proteins.
J.Biol.Chem., 290, 2015
4RCJ
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CRYSTAL STRUCTURE OF YTHDF1 YTH DOMAIN IN COMPLEX WITH 5MER M6A RNA
Descriptor:YTH domain-containing family protein 1, RNA (5'-R(*GP*GP*(6MZ)P*CP*U)-3'), UNKNOWN ATOM OR ION
Authors:Tempel, W., Xu, C., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
Deposit date:2014-09-16
Release date:2014-11-12
Last modified:2015-10-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Basis for the Discriminative Recognition of N6-Methyladenosine RNA by the Human YT521-B Homology Domain Family of Proteins.
J.Biol.Chem., 290, 2015
4RCM
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CRYSTAL STRUCTURE OF THE PHO92 YTH DOMAIN IN COMPLEX WITH M6A
Descriptor:Methylated RNA-binding protein 1, RNA (5'-R(*UP*G)-D(*(6MZ)P*CP*U)-3'), UNKNOWN ATOM OR ION
Authors:Tempel, W., Xu, C., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Min, J., Structural Genomics Consortium (SGC)
Deposit date:2014-09-16
Release date:2014-11-19
Last modified:2015-10-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis for the Discriminative Recognition of N6-Methyladenosine RNA by the Human YT521-B Homology Domain Family of Proteins.
J.Biol.Chem., 290, 2015
4RDN
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STRUCTURE OF YTH-YTHDF2 IN COMPLEX WITH M6A
Descriptor:YTH domain-containing family protein 2, N-methyladenosine, SULFATE ION
Authors:Li, F.D., Zhao, D.B., Wu, J.H., Shi, Y.Y.
Deposit date:2014-09-19
Release date:2014-12-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the YTH domain of human YTHDF2 in complex with an m(6)A mononucleotide reveals an aromatic cage for m(6)A recognition.
Cell Res., 24, 2014
4RDO
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STRUCTURE OF YTH-YTHDF2 IN THE FREE STATE
Descriptor:YTH domain-containing family protein 2, SULFATE ION
Authors:Li, F.D., Zhao, D.B., Wu, J.H., Shi, Y.Y.
Deposit date:2014-09-19
Release date:2014-12-24
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of the YTH domain of human YTHDF2 in complex with an m(6)A mononucleotide reveals an aromatic cage for m(6)A recognition.
Cell Res., 24, 2014
4U8T
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CRYSTAL STRUCTURE OF YTH DOMAIN OF ZYGOSACCHAROMYCES ROUXII MRB1 PROTEIN IN COMPLEX WITH N6-METHYLADENOSINE RNA
Descriptor:ZYRO0G01672p, RNA (5'-R(*AP*GP*GP*(6MZ)P*CP*AP*U)-3')
Authors:Luo, S., Tong, L.
Deposit date:2014-08-04
Release date:2014-09-10
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular basis for the recognition of methylated adenines in RNA by the eukaryotic YTH domain.
Proc.Natl.Acad.Sci.USA, 111, 2014
4WQN
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CRYSTAL STRUCTURE OF N6-METHYLADENOSINE RNA READER YTHDF2
Descriptor:YTH domain-containing family protein 2, GLYCEROL, 1,2-ETHANEDIOL
Authors:Zhu, T., Roundtree, I.A., Wang, P., Wang, X., Wang, L., Sun, C., Tian, Y., Li, J., He, C., Xu, Y.
Deposit date:2014-10-22
Release date:2014-11-19
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (2.121 Å)
Cite:Crystal structure of the YTH domain of YTHDF2 reveals mechanism for recognition of N6-methyladenosine.
Cell Res., 24, 2014
5DNO
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CRYSTAL STRUCTURE OF MMI1 YTH DOMAIN COMPLEX WITH RNA
Descriptor:YTH domain-containing protein mmi1, RNA (5'-R(*CP*UP*UP*AP*AP*AP*C)-3')
Authors:Wang, C.Y., Zhu, Y.W., Wu, J.H., Shi, Y.Y.
Deposit date:2015-09-10
Release date:2016-04-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A novel RNA-binding mode of the YTH domain reveals the mechanism for recognition of determinant of selective removal by Mmi1
Nucleic Acids Res., 44, 2016
5DNP
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CRYSTAL STRUCTURE OF MMI1 YTH DOMAIN
Descriptor:YTH domain-containing protein mmi1, PHOSPHATE ION
Authors:Wang, C.Y., Zhu, Y.W., Shi, Y.Y., Wu, J.H.
Deposit date:2015-09-10
Release date:2016-04-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A novel RNA-binding mode of the YTH domain reveals the mechanism for recognition of determinant of selective removal by Mmi1
Nucleic Acids Res., 44, 2016
5EIM
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YTH DOMAIN-CONTAINING PROTEIN MMI1 AND RNA COMPLEX
Descriptor:YTH domain-containing protein mmi1, RNA (5'-R(*AP*UP*UP*AP*AP*AP*CP*A)-3')
Authors:Wu, B.X., Xu, J.H., Su, S.C., Ma, J.B.
Deposit date:2015-10-30
Release date:2016-01-27
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structural insights into the specific recognition of DSR by the YTH domain containing protein Mmi1
Biochem. Biophys. Res. Commun., 491, 2017
5EIP
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APO-STRUCTURE OF YTH DOMAIN OF SPMMI1
Descriptor:YTH domain-containing protein mmi1
Authors:Wu, B.X., Xu, J.H., Su, S.C., Ma, J.B.
Deposit date:2015-10-30
Release date:2016-01-27
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Structural insights into the specific recognition of DSR by the YTH domain containing protein Mmi1
Biochem. Biophys. Res. Commun., 491, 2017
5H8A
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MMI1 YTH DOMAIN
Descriptor:YTH domain-containing protein mmi1
Authors:Chatterjee, D., Goldgur, Y., Shuman, S.
Deposit date:2015-12-23
Release date:2016-01-13
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (1.751 Å)
Cite:Mmi1 YTH domain
To Be Published
5HFZ
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MMI1 YTH DOMAIN
Descriptor:YTH domain-containing protein mmi1
Authors:Chatterjee, D., Goldgur, Y., Shuman, S.
Deposit date:2016-01-07
Release date:2016-02-10
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Mmi1 YTH domain
To Be Published
5O8M
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CRYSTAL STRUCTURE OF THE MMI1 YTH DOMAIN
Descriptor:YTH domain-containing protein mmi1, GLYCEROL
Authors:Brettschneider, J., Verdel, A., Kadlec, J.
Deposit date:2017-06-13
Release date:2018-04-25
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Selective termination of lncRNA transcription promotes heterochromatin silencing and cell differentiation.
EMBO J., 36, 2017
6FPP
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STRUCTURE OF S. POMBE MMI1
Descriptor:YTH domain-containing protein mmi1, GLYCEROL, MAGNESIUM ION
Authors:Stowell, J.A.W., Hill, C.H., Yu, M., Wagstaff, J.L., McLaughlin, S.H., Freund, S.M.V., Passmore, L.A.
Deposit date:2018-02-11
Release date:2018-05-09
Last modified:2018-06-27
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:A low-complexity region in the YTH domain protein Mmi1 enhances RNA binding.
J. Biol. Chem., 293, 2018
6FPQ
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STRUCTURE OF S. POMBE MMI1 IN COMPLEX WITH 7-MER RNA
Descriptor:YTH domain-containing protein mmi1, RNA (5'-R(*UP*UP*AP*AP*AP*CP*C)-3'), (4R)-2-METHYLPENTANE-2,4-DIOL
Authors:Stowell, J.A.W., Hill, C.H., Yu, M., Wagstaff, J.L., McLaughlin, S.H., Freund, S.M.V., Passmore, L.A.
Deposit date:2018-02-11
Release date:2018-05-09
Last modified:2018-06-27
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:A low-complexity region in the YTH domain protein Mmi1 enhances RNA binding.
J. Biol. Chem., 293, 2018
6FPX
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STRUCTURE OF S. POMBE MMI1 IN COMPLEX WITH 11-MER RNA
Descriptor:YTH domain-containing protein mmi1, RNA (5'-R(P*UP*UP*UP*AP*AP*AP*CP*CP*UP*A)-3'), GLYCEROL
Authors:Stowell, J.A.W., Hill, C.H., Yu, M., Wagstaff, J.L., McLaughlin, S.H., Freund, S.M.V., Passmore, L.A.
Deposit date:2018-02-12
Release date:2018-05-09
Last modified:2018-06-27
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:A low-complexity region in the YTH domain protein Mmi1 enhances RNA binding.
J. Biol. Chem., 293, 2018
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