1O1Z
  • Download 1o1z
  • View 1o1z
Molmil generated image of 1o1z
CRYSTAL STRUCTURE OF GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE (GDPD) (TM1621) FROM THERMOTOGA MARITIMA AT 1.60 A RESOLUTION
Descriptor:glycerophosphodiester phosphodiesterase, SODIUM ION
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2003-02-12
Release date:2003-04-01
Last modified:2018-07-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a glycerophosphodiester phosphodiesterase (GDPD) from Thermotoga maritima (TM1621) at 1.60 A resolution.
Proteins, 56, 2004
1T8Q
  • Download 1t8q
  • View 1t8q
Molmil generated image of 1t8q
STRUCTURAL GENOMICS, CRYSTAL STRUCTURE OF GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE FROM E. COLI
Descriptor:Glycerophosphoryl diester phosphodiesterase, periplasmic, MAGNESIUM ION, ...
Authors:Zhang, R., Kim, Y., Dementieva, I., Duke, N., Stols, L., Donnelly, M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-05-13
Release date:2004-08-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of Glycerophosphoryl diester phosphodiesterase from E. coli
To be Published
1V8E
  • Download 1v8e
  • View 1v8e
Molmil generated image of 1v8e
CRYSTAL STRUCTURE OF GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE FROM THERMUS THERMOPHILUS HB8
Descriptor:putative glycerophosphoryl diester phosphodiesterase
Authors:Ishijima, J., Ida, K., Yutani, K., Miyano, M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-05
Release date:2005-01-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of glycerophosphoryl diester phosphodiesterase from Thermus thermophilus HB8
To be Published
1VD6
  • Download 1vd6
  • View 1vd6
Molmil generated image of 1vd6
CRYSTAL STRUCTURE OF GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE COMPLEXED WITH GLYCEROL
Descriptor:Glycerophosphoryl Diester Phosphodiesterase, GLYCEROL
Authors:Ishijima, J., Yutani, K., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-18
Release date:2005-04-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal Structure of Glycerophosphoryl Diester Phosphodiesterase complexed with Glycerol
To be Published
1YDY
  • Download 1ydy
  • View 1ydy
Molmil generated image of 1ydy
CRYSTAL STRUCTURE OF PERIPLASMIC GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE FROM ESCHERICHIA COLI
Descriptor:Glycerophosphoryl diester phosphodiesterase, CALCIUM ION, GLYCEROL
Authors:Malashkevich, V.N., Fedorov, E., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-12-27
Release date:2005-01-25
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of periplasmic glycerophosphodiester phosphodiesterase from Escherichia coli
To be Published
1ZCC
  • Download 1zcc
  • View 1zcc
Molmil generated image of 1zcc
CRYSTAL STRUCTURE OF GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE FROM AGROBACTERIUM TUMEFACIENS STR.C58
Descriptor:glycerophosphodiester phosphodiesterase, ACETATE ION, SULFATE ION
Authors:Krishnamurthy, N.R., Kumaran, D., Swaminathan, S., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2005-04-11
Release date:2005-05-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of glycerophosphodiester phosphodiesterase from Agrobacterium tumefaciens by SAD with a large asymmetric unit.
Proteins, 65, 2006
2OOG
  • Download 2oog
  • View 2oog
Molmil generated image of 2oog
CRYSTAL STRUCTURE OF GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE FROM STAPHYLOCOCCUS AUREUS
Descriptor:Glycerophosphoryl diester phosphodiesterase, ZINC ION, SULFATE ION, ...
Authors:Patskovsky, Y., Fedorov, E., Toro, R., Sauder, J.M., Smith, D., Freeman, J., Maletic, M., Powell, A., Gheyi, T., Wasserman, S.R., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-01-25
Release date:2007-02-06
Last modified:2018-11-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Glycerophosphoryl Diester Phosphodiesterase from Staphylococcus Aureus
To be Published
2P76
  • Download 2p76
  • View 2p76
Molmil generated image of 2p76
CRYSTAL STRUCTURE OF A GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE FROM STAPHYLOCOCCUS AUREUS
Descriptor:Glycerophosphoryl diester phosphodiesterase, SODIUM ION, GLYCEROL
Authors:Fedorov, A.A., Fedorov, E.V., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-03-20
Release date:2007-04-03
Last modified:2018-11-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of a Glycerophosphodiester Phosphodiesterase from Staphylococcus aureus
To be Published
2PZ0
  • Download 2pz0
  • View 2pz0
Molmil generated image of 2pz0
CRYSTAL STRUCTURE OF GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE (GDPD) FROM T. TENGCONGENSIS
Descriptor:Glycerophosphoryl diester phosphodiesterase, CALCIUM ION, GLYCEROL
Authors:Shi, L., Liu, J.F., An, X.M., Liang, D.C.
Deposit date:2007-05-17
Release date:2008-04-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystal structure of glycerophosphodiester phosphodiesterase (GDPD) from Thermoanaerobacter tengcongensis, a metal ion-dependent enzyme: insight into the catalytic mechanism.
Proteins, 72, 2008
3CH0
  • Download 3ch0
  • View 3ch0
Molmil generated image of 3ch0
CRYSTAL STRUCTURE OF GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE (YP_677622.1) FROM CYTOPHAGA HUTCHINSONII ATCC 33406 AT 1.50 A RESOLUTION
Descriptor:Glycerophosphodiester phosphodiesterase, CITRIC ACID, 1,2-ETHANEDIOL, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-03-06
Release date:2008-03-18
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of glycerophosphoryl diester phosphodiesterase (YP_677622.1) from Cytophaga hutchinsonii ATCC 33406 at 1.50 A resolution
To be published
3KS5
  • Download 3ks5
  • View 3ks5
Molmil generated image of 3ks5
CRYSTAL STRUCTURE OF PUTATIVE GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE (17743486) FROM AGROBACTERIUM TUMEFACIENS STR. C58 (DUPONT) AT 2.05 A RESOLUTION
Descriptor:Glycerophosphoryl diester phosphodiesterase, FE (III) ION, ACETATE ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-11-20
Release date:2009-12-08
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of Putative glycerophosphoryl diester phosphodiesterase (17743486) from AGROBACTERIUM TUMEFACIENS str. C58 (Dupont) at 2.05 A resolution
To be published
3KS6
  • Download 3ks6
  • View 3ks6
Molmil generated image of 3ks6
CRYSTAL STRUCTURE OF PUTATIVE GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE (17743486) FROM AGROBACTERIUM TUMEFACIENS STR. C58 (DUPONT) AT 1.80 A RESOLUTION
Descriptor:Glycerophosphoryl diester phosphodiesterase, UNKNOWN LIGAND, MAGNESIUM ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-11-20
Release date:2009-12-08
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Putative glycerophosphoryl diester phosphodiesterase (17743486) from AGROBACTERIUM TUMEFACIENS str. C58 (Dupont) at 1.80 A resolution
To be published
3L12
  • Download 3l12
  • View 3l12
Molmil generated image of 3l12
CRYSTAL STRUCTURE OF PUTATIVE GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE (YP_165505.1) FROM SILICIBACTER POMEROYI DSS-3 AT 1.60 A RESOLUTION
Descriptor:Putative Glycerophosphoryl diester phosphodiesterase, MAGNESIUM ION, CHLORIDE ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-12-10
Release date:2009-12-29
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of Putative glycerophosphoryl diester phosphodiesterase (YP_165505.1) from Silicibacter pomeroyi DSS-3 at 1.60 A resolution
To be published
3MZ2
  • Download 3mz2
  • View 3mz2
Molmil generated image of 3mz2
CRYSTAL STRUCTURE OF A GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE (BDI_3922) FROM PARABACTEROIDES DISTASONIS ATCC 8503 AT 1.55 A RESOLUTION
Descriptor:Glycerophosphoryl diester phosphodiesterase, SULFATE ION, TETRAETHYLENE GLYCOL, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-05-11
Release date:2010-07-07
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of a Glycerophosphoryl diester phosphodiesterase (BDI_3922) from Parabacteroides distasonis ATCC 8503 at 1.55 A resolution
To be published
3NO3
  • Download 3no3
  • View 3no3
Molmil generated image of 3no3
CRYSTAL STRUCTURE OF A GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE (BDI_0402) FROM PARABACTEROIDES DISTASONIS ATCC 8503 AT 1.89 A RESOLUTION
Descriptor:glycerophosphodiester phosphodiesterase, MAGNESIUM ION, GLYCEROL, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-06-24
Release date:2010-07-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal structure of a glycerophosphodiester phosphodiesterase (BDI_0402) from Parabacteroides distasonis ATCC 8503 at 1.89 A resolution
To be published
4OEC
  • Download 4oec
  • View 4oec
Molmil generated image of 4oec
CRYSTAL STRUCTURE OF GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE FROM THERMOCOCCUS KODAKARENSIS KOD1
Descriptor:Glycerophosphoryl diester phosphodiesterase, MAGNESIUM ION
Authors:Atsuta, Y., You, D.J., Takano, K., Koga, Y., Kanaya, S.
Deposit date:2014-01-13
Release date:2015-01-14
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of glycerophosphodiester phosphodiesterase from Thermococcus kodakarensis KOD1
To be Published
4R7O
  • Download 4r7o
  • View 4r7o
Molmil generated image of 4r7o
CRYSTAL STRUCTURE OF PUTATIVE GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASEFROM BACILLUS ANTHRACI
Descriptor:Glycerophosphoryl diester phosphodiesterase, putative, MAGNESIUM ION, ...
Authors:Kim, Y., Zhou, M., Shatsman, S., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-08-28
Release date:2014-09-10
Method:X-RAY DIFFRACTION (2.534 Å)
Cite:Crystal Structure of Putative Glycerophosphoryl Diester Phosphodiesterasefrom Bacillus anthraci
To be Published
5T91
  • Download 5t91
  • View 5t91
Molmil generated image of 5t91
CRYSTAL STRUCTURE OF B. SUBTILIS 168 GLPQ IN COMPLEX WITH BICINE
Descriptor:Glycerophosphoryl diester phosphodiesterase, CALCIUM ION, BICINE, ...
Authors:Li, F.K.K., Strynadka, N.C.J.
Deposit date:2016-09-09
Release date:2016-11-02
Last modified:2017-09-13
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Identification of Two Phosphate Starvation-induced Wall Teichoic Acid Hydrolases Provides First Insights into the Degradative Pathway of a Key Bacterial Cell Wall Component.
J. Biol. Chem., 291, 2016
5T9B
  • Download 5t9b
  • View 5t9b
Molmil generated image of 5t9b
CRYSTAL STRUCTURE OF B. SUBTILIS 168 GLPQ IN COMPLEX WITH GLYCEROL-3-PHOSPHATE (5 MINUTE SOAK)
Descriptor:Glycerophosphoryl diester phosphodiesterase, CALCIUM ION, SN-GLYCEROL-3-PHOSPHATE, ...
Authors:Li, F.K.K., Strynadka, N.C.J.
Deposit date:2016-09-09
Release date:2016-11-02
Last modified:2017-09-13
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Identification of Two Phosphate Starvation-induced Wall Teichoic Acid Hydrolases Provides First Insights into the Degradative Pathway of a Key Bacterial Cell Wall Component.
J. Biol. Chem., 291, 2016
5T9C
  • Download 5t9c
  • View 5t9c
Molmil generated image of 5t9c
CRYSTAL STRUCTURE OF B. SUBTILIS 168 GLPQ IN COMPLEX WITH GLYCEROL-3-PHOSPHATE (1 HOUR SOAK)
Descriptor:Glycerophosphoryl diester phosphodiesterase, CALCIUM ION, SN-GLYCEROL-3-PHOSPHATE, ...
Authors:Li, F.K.K., Strynadka, N.C.J.
Deposit date:2016-09-09
Release date:2016-11-02
Last modified:2017-09-13
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Identification of Two Phosphate Starvation-induced Wall Teichoic Acid Hydrolases Provides First Insights into the Degradative Pathway of a Key Bacterial Cell Wall Component.
J. Biol. Chem., 291, 2016
5VUG
  • Download 5vug
  • View 5vug
Molmil generated image of 5vug
CRYSTAL STRUCTURE OF GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE DOMAIN OF UNCHARACTERIZED PROTEIN RV2277C FROM MYCOBACTERIUM TUBERCULOSIS
Descriptor:Uncharacterized protein Rv2277c, CALCIUM ION, GLYCEROL
Authors:Kim, Y., Li, H., Endres, M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Deposit date:2017-05-19
Release date:2017-06-14
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of Glycerophosphoryl Diester Phosphodiesterase Domain of Uncharacterized Protein Rv2277c from Mycobacterium tuberculosis
To Be Published
3I10
  • Download 3i10
  • View 3i10
Molmil generated image of 3i10
CRYSTAL STRUCTURE OF PUTATIVE GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE (NP_812074.1) FROM BACTEROIDES THETAIOTAOMICRON VPI-5482 AT 1.35 A RESOLUTION
Descriptor:Putative Glycerophosphoryl diester phosphodiesterase, ACETATE ION, 1,2-ETHANEDIOL, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-06-25
Release date:2009-07-21
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structure of Putative glycerophosphoryl diester phosphodiesterase (NP_812074.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 1.35 A resolution
To be Published
PDBj@FacebookPDBj@TwitterwwPDBwwPDB Foundation

Copyright © 2013-2018 Protein Data Bank Japan