1WID
  • Download 1wid
  • View 1wid
Molmil generated image of 1wid
SOLUTION STRUCTURE OF THE B3 DNA-BINDING DOMAIN OF RAV1
Descriptor:DNA-binding protein RAV1
Authors:Yamasaki, K., Inoue, M., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution Structure of the B3 DNA Binding Domain of the Arabidopsis Cold-Responsive Transcription Factor RAV1
Plant Cell, 16, 2004
1YEL
  • Download 1yel
  • View 1yel
Molmil generated image of 1yel
STRUCTURE OF THE HYPOTHETICAL ARABIDOPSIS THALIANA PROTEIN AT1G16640.1
Descriptor:At1g16640
Authors:Peterson, F.C., Waltner, J.K., Lytle, B.L., Volkman, B.F., Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2004-12-28
Release date:2005-01-18
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of the B3 domain from Arabidopsis thaliana protein At1g16640
Protein Sci., 14, 2005
4I1K
  • Download 4i1k
  • View 4i1k
Molmil generated image of 4i1k
CRYSTAL STRUCTURE OF VRN1 (RESIDUES 208-341)
Descriptor:B3 domain-containing transcription factor VRN1, CHLORIDE ION
Authors:King, G., Chanson, A.H., McCallum, E.J., Ohme-Takagi, M., Byriel, K., Hill, J.M., Martin, J.L., Mylne, J.S.
Deposit date:2012-11-21
Release date:2012-12-19
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Arabidopsis B3 Domain Protein VERNALIZATION1 (VRN1) Is Involved in Processes Essential for Development, with Structural and Mutational Studies Revealing Its DNA-binding Surface.
J.Biol.Chem., 288, 2013
5OS9
  • Download 5os9
  • View 5os9
Molmil generated image of 5os9
STRUCTURE OF THE B3 DNA-BINDING DOMAIN OF NGA1
Descriptor:B3 domain-containing transcription factor NGA1
Authors:Sasnauskas, G., Manakova, E.
Deposit date:2017-08-17
Release date:2018-09-05
Last modified:2018-11-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:DNA recognition by Arabidopsis transcription factors ABI3 and NGA1.
FEBS J., 285, 2018
5YZY
  • Download 5yzy
  • View 5yzy
Molmil generated image of 5yzy
ATVAL1 B3 DOMAIN IN COMPLEX WITH 13BP-DNA
Descriptor:DNA (5'-D(*AP*TP*TP*CP*TP*GP*CP*AP*TP*GP*GP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*CP*CP*AP*TP*GP*CP*AP*GP*AP*A)-3'), B3 domain-containing transcription repressor VAL1, ...
Authors:Wu, B.X., Zhang, M.M.
Deposit date:2017-12-17
Release date:2018-05-02
Last modified:2018-05-30
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structural insight into the role of VAL1 B3 domain for targeting to FLC locus in Arabidopsis thaliana.
Biochem. Biophys. Res. Commun., 2018
5YZZ
  • Download 5yzz
  • View 5yzz
Molmil generated image of 5yzz
ATVAL1 B3 DOMAIN IN COMPLEX WITH 13BP-DNA
Descriptor:DNA (5'-D(*AP*TP*TP*CP*TP*GP*CP*AP*TP*GP*GP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*CP*CP*AP*TP*GP*CP*AP*GP*AP*A)-3'), B3 domain-containing transcription repressor VAL1
Authors:Wu, B.X., Zhang, M.M.
Deposit date:2017-12-17
Release date:2018-05-02
Last modified:2018-05-30
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Structural insight into the role of VAL1 B3 domain for targeting to FLC locus in Arabidopsis thaliana.
Biochem. Biophys. Res. Commun., 2018
5Z00
  • Download 5z00
  • View 5z00
Molmil generated image of 5z00
ATVAL1 B3 DOMAIN IN COMPLEX WITH 15BP-DNA
Descriptor:DNA (5'-D(*AP*AP*TP*TP*CP*TP*GP*CP*AP*TP*GP*GP*AP*TP*T)-3'), DNA (5'-D(*TP*AP*AP*TP*CP*CP*AP*TP*GP*CP*AP*GP*AP*AP*T)-3'), B3 domain-containing transcription repressor VAL1, ...
Authors:Wu, B.X., Zhang, M.M.
Deposit date:2017-12-17
Release date:2018-05-02
Last modified:2018-05-30
Method:X-RAY DIFFRACTION (2.587 Å)
Cite:Structural insight into the role of VAL1 B3 domain for targeting to FLC locus in Arabidopsis thaliana.
Biochem. Biophys. Res. Commun., 2018
6FAS
  • Download 6fas
  • View 6fas
Molmil generated image of 6fas
CRYSTAL STRUCTURE OF VAL1 B3 DOMAIN IN COMPLEX WITH COGNATE DNA
Descriptor:B3 domain-containing transcription repressor VAL1, DNA (5'-D(*AP*GP*CP*CP*AP*TP*GP*CP*AP*CP*CP*G)-3'), DNA (5'-D(*CP*GP*GP*TP*GP*CP*AP*TP*GP*GP*CP*T)-3')
Authors:Sasnauskas, G.
Deposit date:2017-12-17
Release date:2018-04-18
Last modified:2018-05-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis of DNA target recognition by the B3 domain of Arabidopsis epigenome reader VAL1.
Nucleic Acids Res., 46, 2018
4LDU
  • Download 4ldu
  • View 4ldu
Molmil generated image of 4ldu
CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF ARABIDOPSIS THALIANA AUXIN RESPONSE FACTOR 5
Descriptor:Auxin response factor 5, CHLORIDE ION
Authors:Boer, D.R., Freire-Rios, A., van den Berg, W.M.A., Weijers, D., Coll, M.
Deposit date:2013-06-25
Release date:2014-02-12
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural Basis for DNA Binding Specificity by the Auxin-Dependent ARF Transcription Factors.
Cell(Cambridge,Mass.), 156, 2014
4LDV
  • Download 4ldv
  • View 4ldv
Molmil generated image of 4ldv
CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF A. THAILANA AUXIN RESPONSE FACTOR 1
Descriptor:Auxin response factor 1, IODIDE ION, CHLORIDE ION, ...
Authors:boer, D.R., Freire-Rios, A., van den Berg, W.M.A., Weijers, D., Coll, M.
Deposit date:2013-06-25
Release date:2014-02-12
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural Basis for DNA Binding Specificity by the Auxin-Dependent ARF Transcription Factors.
Cell(Cambridge,Mass.), 156, 2014
4LDW
  • Download 4ldw
  • View 4ldw
Molmil generated image of 4ldw
CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF ARABIDOPSIS THALIANA AUXIN RESPONSE FACTOR 1, P21 STRUCTURE
Descriptor:Auxin response factor 1, CHLORIDE ION
Authors:boer, D.R., Coll, M.
Deposit date:2013-06-25
Release date:2014-02-12
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Structural Basis for DNA Binding Specificity by the Auxin-Dependent ARF Transcription Factors.
Cell(Cambridge,Mass.), 156, 2014
4LDX
  • Download 4ldx
  • View 4ldx
Molmil generated image of 4ldx
CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF ARABIDOPSIS THALIANA AUXIN RESPONSE FACTOR 1 (ARF1) IN COMPLEX WITH PROTOMOR-LIKE SEQUENCE ER7
Descriptor:Auxin response factor 1, ER7, forward sequence, ...
Authors:Boer, D.R., Freire-Rios, A., van den Berg, W.M.A., Weijers, D., Coll, M.
Deposit date:2013-06-25
Release date:2014-02-12
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural Basis for DNA Binding Specificity by the Auxin-Dependent ARF Transcription Factors.
Cell(Cambridge,Mass.), 156, 2014
4LDY
  • Download 4ldy
  • View 4ldy
Molmil generated image of 4ldy
CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF THE G245A MUTANT OF ARABIDOPSIS THALIANA AUXIN REPONSE FACTOR 1
Descriptor:Auxin response factor 1, CHLORIDE ION
Authors:Boer, D.R., Freire-Rios, A., van den Berg, W.M.A., Weijers, D., Coll, M.
Deposit date:2013-06-25
Release date:2014-02-12
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis for DNA Binding Specificity by the Auxin-Dependent ARF Transcription Factors.
Cell(Cambridge,Mass.), 156, 2014
PDBj@FacebookPDBj@TwitterwwPDBwwPDB Foundation

Copyright © 2013-2018 Protein Data Bank Japan