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8WQ9
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BU of 8wq9 by Molmil
Crystal structure of dihydropyrimidinase complexed with gamma-aminobutyric acid
Descriptor: D-hydantoinase/dihydropyrimidinase, GAMMA-AMINO-BUTANOIC ACID, ZINC ION
Authors:Huang, Y.H, Huang, C.Y.
Deposit date:2023-10-11
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:The complexed crystal structure of dihydropyrimidinase reveals a potential interactive link with the neurotransmitter gamma-aminobutyric acid (GABA).
Biochem.Biophys.Res.Commun., 692, 2024
7U5K
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BU of 7u5k by Molmil
Cryo-EM Structure of DPYSL2
Descriptor: Dihydropyrimidinase-related protein 2
Authors:Morgan, C.E, Yu, E.W.
Deposit date:2022-03-02
Release date:2022-12-14
Last modified:2023-01-11
Method:ELECTRON MICROSCOPY (2.78 Å)
Cite:Toward structural-omics of the bovine retinal pigment epithelium.
Cell Rep, 41, 2022
5HME
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BU of 5hme by Molmil
Crystal structure of Triazine Hydrolase variant (P214T/Y215H)
Descriptor: Triazine hydrolase, ZINC ION
Authors:Sugrue, E, Carr, P.D, Jackson, C.J.
Deposit date:2016-01-16
Release date:2016-11-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.151 Å)
Cite:Active Site Desolvation and Thermostability Trade-Offs in the Evolution of Catalytically Diverse Triazine Hydrolases.
Biochemistry, 55, 2016
5HMD
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BU of 5hmd by Molmil
Crystal structure of triazine hydrolase variant (Y215H/E241Q)
Descriptor: Triazine hydrolase, ZINC ION
Authors:Sugrue, E, Carr, P.D, Jackson, C.J.
Deposit date:2016-01-16
Release date:2016-11-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Active Site Desolvation and Thermostability Trade-Offs in the Evolution of Catalytically Diverse Triazine Hydrolases.
Biochemistry, 55, 2016
8DNM
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BU of 8dnm by Molmil
Human Brain Dihydropyrimidinase-related protein 2
Descriptor: Dihydropyrimidinase-related protein 2
Authors:Tringides, M.L.
Deposit date:2022-07-11
Release date:2022-11-16
Last modified:2023-05-31
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:A cryo-electron microscopic approach to elucidate protein structures from human brain microsomes.
Life Sci Alliance, 6, 2023
4YIW
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BU of 4yiw by Molmil
DIHYDROOROTASE FROM BACILLUS ANTHRACIS WITH SUBSTRATE BOUND
Descriptor: Dihydroorotase, N-CARBAMOYL-L-ASPARTATE, ZINC ION
Authors:Lei, H, Santarsiero, B.D, Rice, A.J, Lee, H, Johnson, M.E.
Deposit date:2015-03-02
Release date:2016-08-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Ca-asp bound X-ray structure and inhibition of Bacillus anthracis dihydroorotase (DHOase).
Bioorg.Med.Chem., 24, 2016
4LH8
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BU of 4lh8 by Molmil
Triazine hydrolase from Arthobacter aurescens modified for maximum expression in E.coli
Descriptor: Triazine hydrolase, ZINC ION
Authors:Jackson, C.J, Coppin, C.W, Alexandrov, A, Wilding, M, Liu, J.-W, Ubels, J, Paks, M, Carr, P.D, Newman, J, Russell, R.J, Field, M, Weik, M, Oakeshott, J.G, Scott, C.
Deposit date:2013-07-01
Release date:2014-05-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:300-Fold increase in production of the Zn2+-dependent dechlorinase TrzN in soluble form via apoenzyme stabilization.
Appl.Environ.Microbiol., 80, 2014
4LFY
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BU of 4lfy by Molmil
Crystal structure of a dihydroorotase from Burkholderia cenocepacia J2315
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Dihydroorotase, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2013-06-27
Release date:2013-07-10
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a dihydroorotase from Burkholderia cenocepacia J2315
To be Published
4V1X
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BU of 4v1x by Molmil
The structure of the hexameric atrazine chlorohydrolase, AtzA
Descriptor: ATRAZINE CHLOROHYDROLASE, DI(HYDROXYETHYL)ETHER, FE (III) ION
Authors:Peat, T.S, Newman, J, Balotra, S, Lucent, D, Warden, A.C, Scott, C.
Deposit date:2014-10-04
Release date:2015-03-11
Last modified:2015-03-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Structure of the Hexameric Atrazine Chlorohydrolase Atza.
Acta Crystallogr.,Sect.D, 71, 2015
7UOF
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BU of 7uof by Molmil
Dihydroorotase from M. jannaschii
Descriptor: Dihydroorotase, ZINC ION
Authors:Vitali, J, Nix, J.C, Newman, H.E, Colaneri, M.J.
Deposit date:2022-04-12
Release date:2022-08-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of Methanococcus jannaschii dihydroorotase.
Proteins, 91, 2023
4M51
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BU of 4m51 by Molmil
Crystal structure of amidohydrolase nis_0429 (ser145ala mutant) from nitratiruptor sp. sb155-2
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Amidohydrolase family protein, BENZOIC ACID, ...
Authors:Patskovsky, Y, Toro, R, Gobble, A, Raushel, F.M, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-08-07
Release date:2013-09-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Deamination of 6-aminodeoxyfutalosine in menaquinone biosynthesis by distantly related enzymes.
Biochemistry, 52, 2013
4V1Y
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BU of 4v1y by Molmil
The structure of the hexameric atrazine chlorohydrolase, AtzA
Descriptor: 1,2-ETHANEDIOL, ATRAZINE CHLOROHYDROLASE, CHLORIDE ION, ...
Authors:Peat, T.S, Newman, J, Balotra, S, Lucent, D, Warden, A.C, Scott, C.
Deposit date:2014-10-04
Release date:2015-03-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Structure of the Hexameric Atrazine Chlorohydrolase Atza.
Acta Crystallogr.,Sect.D, 71, 2015
4WHB
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BU of 4whb by Molmil
Crystal structure of phenylurea hydrolase B
Descriptor: Phenylurea hydrolase B, ZINC ION
Authors:Sugrue, E, Carr, P.D, Khurana, J.L, Jackson, C.J.
Deposit date:2014-09-21
Release date:2015-02-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.958 Å)
Cite:Evolutionary Expansion of the Amidohydrolase Superfamily in Bacteria in Response to the Synthetic Compounds Molinate and Diuron.
Appl.Environ.Microbiol., 81, 2015
7LKK
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BU of 7lkk by Molmil
Crystal structure of Helicobacter pylori aminofutalosine deaminase (AFLDA) in complex with Methylthio-coformycin
Descriptor: (8R)-3-(5-S-methyl-5-thio-beta-D-ribofuranosyl)-3,6,7,8-tetrahydroimidazo[4,5-d][1,3]diazepin-8-ol, 1,2-ETHANEDIOL, Aminofutalosine deaminase, ...
Authors:Harijan, R.K, Feng, M, Bonanno, J.B, Almo, S.C, Schramm, V.L.
Deposit date:2021-02-02
Release date:2021-06-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Aminofutalosine Deaminase in the Menaquinone Pathway of Helicobacter pylori .
Biochemistry, 60, 2021
7LKJ
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BU of 7lkj by Molmil
Crystal structure of Helicobacter pylori aminofutalosine deaminase (AFLDA)
Descriptor: 1,2-ETHANEDIOL, Aminofutalosine deaminase, FE (III) ION
Authors:Harijan, R.K, Feng, M, Bonanno, J.B, Almo, S.C, Schramm, V.L.
Deposit date:2021-02-02
Release date:2021-06-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Aminofutalosine Deaminase in the Menaquinone Pathway of Helicobacter pylori .
Biochemistry, 60, 2021
4WGX
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BU of 4wgx by Molmil
Crystal Structure of Molinate Hydrolase
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, COBALT (II) ION, Molinate hydrolase
Authors:Sugrue, E, Carr, P.D, Fraser, N.J, Hopkins, D.H, Jackson, C.J.
Deposit date:2014-09-19
Release date:2015-02-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Evolutionary Expansion of the Amidohydrolase Superfamily in Bacteria in Response to the Synthetic Compounds Molinate and Diuron.
Appl.Environ.Microbiol., 81, 2015
5E5C
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BU of 5e5c by Molmil
Crystal structure of dihydropyrimidinase from Pseudomonas aeruginosa PAO1
Descriptor: D-hydantoinase/dihydropyrimidinase, ZINC ION
Authors:Huang, C.C, Huang, Y.H, Hsieh, Y.C, Tzeng, C.T, Chen, C.J, Huang, C.Y.
Deposit date:2015-10-08
Release date:2016-09-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of dihydropyrimidinase from Pseudomonas aeruginosa PAO1: Insights into the molecular basis of formation of a dimer
Biochem.Biophys.Res.Commun., 478, 2016
7WW2
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BU of 7ww2 by Molmil
Structure of an Isocytosine specific deaminase Vcz
Descriptor: 8-oxoguanine deaminase, ZINC ION
Authors:Li, X.J, Wu, B.X.
Deposit date:2022-02-12
Release date:2023-02-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural characterization of an isocytosine-specific deaminase VCZ reveals its application potential in the anti-cancer therapy.
Iscience, 26, 2023
7X68
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BU of 7x68 by Molmil
CYS179 and CYS504 of CRMP2 were covalently binded by a Sesquiterpene lactone
Descriptor: (3aR,5S,8R,8aR,9aR)-5,8a-dimethyl-3-methylidene-8-oxidanyl-5,6,7,8,9,9a-hexahydro-3aH-benzo[f][1]benzofuran-2-one, Dihydropyrimidinase-related protein 2, SODIUM ION
Authors:Zhang, S.D, Ma, Y.F, Zhang, J.
Deposit date:2022-03-06
Release date:2022-05-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:CYS179 and CYS504 of CRMP2 were covalently binded by a Sesquiterpene lactone
To Be Published
7NUU
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BU of 7nuu by Molmil
Crystal structure of human AMDHD2 in complex with Zn
Descriptor: GLYCEROL, N-acetylglucosamine-6-phosphate deacetylase, ZINC ION
Authors:Ruegenberg, S, Kroef, V, Baumann, U, Denzel, M.S.
Deposit date:2021-03-14
Release date:2021-04-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.836 Å)
Cite:GFPT2/GFAT2 and AMDHD2 act in tandem to control the hexosamine pathway.
Elife, 11, 2022
7NUT
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BU of 7nut by Molmil
Crystal structure of human AMDHD2 in complex with Zn and GlcN6P
Descriptor: 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, N-acetylglucosamine-6-phosphate deacetylase, ZINC ION
Authors:Ruegenberg, S, Kroef, V, Baumann, U, Denzel, M.S.
Deposit date:2021-03-14
Release date:2021-04-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.898 Å)
Cite:GFPT2/GFAT2 and AMDHD2 act in tandem to control the hexosamine pathway.
Elife, 11, 2022
5HMF
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BU of 5hmf by Molmil
Crystal structure of triazine hydrolase variant (P214T/Y215H/E241Q)
Descriptor: Triazine hydrolase, ZINC ION
Authors:Sugrue, E, Carr, P.D, Jackson, C.J.
Deposit date:2016-01-16
Release date:2016-11-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Active Site Desolvation and Thermostability Trade-Offs in the Evolution of Catalytically Diverse Triazine Hydrolases.
Biochemistry, 55, 2016
4RDV
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BU of 4rdv by Molmil
The structure of N-formimino-L-Glutamate Iminohydrolase from Pseudomonas aeruginosa complexed with N-formimino-L-Aspartate
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, N-FORMIMINO-L-GLUTAMATE IMINOHYDROLASE, ...
Authors:Fedorov, A.A, Fedorov, E.V, Marti-Arbona, R, Raushel, F.M, Almo, S.C.
Deposit date:2014-09-19
Release date:2014-10-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:The structure of N-formimino-L-Glutamate Iminohydrolase from Pseudomonas aeruginosa complexed with N-formimino-L-Aspartate
To be Published
4RDW
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BU of 4rdw by Molmil
The structure of N-formimino-L-Glutamate Iminohydrolase from Pseudomonas aeruginosa complexed with N-Guanidino-L-Glutaric acid
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Fedorov, A.A, Fedorov, E.V, Marti-Arbona, R, Raushel, F.M, Almo, S.C.
Deposit date:2014-09-19
Release date:2014-10-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.591 Å)
Cite:The structure of N-formimino-L-Glutamate Iminohydrolase from Pseudomonas aeruginosa complexed with N-Guanidino-L-Glutaric acid
To be Published
4RZB
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BU of 4rzb by Molmil
The structure of N-formimino-L-Glutamate Iminohydrolase from Pseudomonas aeruginosa complexed with N-formimino-L-Aspartate, SOAKED WITH MERCURY
Descriptor: GLYCEROL, MERCURY (II) ION, N-[(E)-iminomethyl]-L-aspartic acid, ...
Authors:Fedorov, A.A, Fedorov, E.V, Marti-Arbona, R, Raushel, F.M, Almo, S.C.
Deposit date:2014-12-19
Release date:2015-01-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.863 Å)
Cite:Structure of N-Formimino-l-glutamate Iminohydrolase from Pseudomonas aeruginosa.
Biochemistry, 54, 2015

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PDB entries from 2024-04-17

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