2IDB
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CRYSTAL STRUCTURE OF 3-OCTAPRENYL-4-HYDROXYBENZOATE DECARBOXYLASE (UBID) FROM ESCHERICHIA COLI, NORTHEAST STRUCTURAL GENOMICS TARGET ER459.
Descriptor:3-octaprenyl-4-hydroxybenzoate carboxy-lyase, PENTAETHYLENE GLYCOL, 1,2-ETHANEDIOL
Authors:Zhou, W., Forouhar, F., Seetharaman, J., Fang, Y., Xiao, R., Cunningham, K., Ma, L.-C., Chen, C.X., Acton, T.B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
Deposit date:2006-09-14
Release date:2006-10-24
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure of 3-octaprenyl-4-hydroxybenzoate decarboxylase (UbiD) from Escherichia coli, Northeast Structural Genomics Target ER459.
TO BE PUBLISHED
4IP2
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PUTATIVE AROMATIC ACID DECARBOXYLASE
Descriptor:Aromatic Acid Decarboxylase, MAGNESIUM ION, 1,2-ETHANEDIOL, ...
Authors:Schneider, G., Brunner, K., Izumi, A., Jacewicz, A.
Deposit date:2013-01-09
Release date:2013-07-10
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural insights into the UbiD protein family from the crystal structure of PA0254 from Pseudomonas aeruginosa.
Plos One, 8, 2013
4IWS
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PUTATIVE AROMATIC ACID DECARBOXYLASE
Descriptor:PA0254, SULFATE ION
Authors:Jacewicz, A., Izumi, A., Brunner, K., Schneider, G.
Deposit date:2013-01-24
Release date:2013-05-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Insights into the UbiD Protein Family from the Crystal Structure of PA0254 from Pseudomonas aeruginosa.
Plos One, 8, 2013
4S13
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FERULIC ACID DECARBOXYLASE (FDC1)
Descriptor:Ferulic acid decarboxylase 1, 4-ethenylphenol
Authors:Lee, S.G., Bhuiya, M.W., Yu, O., Jez, J.M.
Deposit date:2015-01-07
Release date:2015-05-06
Last modified:2015-06-03
Method:X-RAY DIFFRACTION (2.348 Å)
Cite:Structure and Mechanism of Ferulic Acid Decarboxylase (FDC1) from Saccharomyces cerevisiae.
Appl.Environ.Microbiol., 81, 2015
4ZA4
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STRUCTURE OF A. NIGER FDC1 WITH THE PRENYLATED-FLAVIN COFACTOR IN THE IMINIUM FORM.
Descriptor:Fdc1, 1-deoxy-5-O-phosphono-1-(3,3,4,5-tetramethyl-9,11-dioxo-2,3,8,9,10,11-hexahydro-7H-quinolino[1,8-fg]pteridin-12-ium-7-yl)-D-ribitol, MANGANESE (II) ION, ...
Authors:Payne, K.A.P., Leys, D.
Deposit date:2015-04-13
Release date:2015-06-17
Last modified:2017-08-30
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:New cofactor supports alpha , beta-unsaturated acid decarboxylation via 1,3-dipolar cycloaddition.
Nature, 522, 2015
4ZA5
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STRUCTURE OF A. NIGER FDC1 WITH THE PRENYLATED-FLAVIN COFACTOR IN THE IMINIUM AND KETIMINE FORMS.
Descriptor:Fdc1, 1-deoxy-5-O-phosphono-1-(3,3,4,5-tetramethyl-9,11-dioxo-2,3,8,9,10,11-hexahydro-7H-quinolino[1,8-fg]pteridin-12-ium-7-yl)-D-ribitol, 1-deoxy-5-O-phosphono-1-[(10aR)-2,2,3,4-tetramethyl-8,10-dioxo-1,2,8,9,10,10a-hexahydro-6H-indeno[1,7-ef]pyrimido[4,5-b][1,4]diazepin-6-yl]-D-ribitol, ...
Authors:Payne, K.A.P., Leys, D.
Deposit date:2015-04-13
Release date:2015-06-17
Last modified:2015-07-01
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:New cofactor supports alpha , beta-unsaturated acid decarboxylation via 1,3-dipolar cycloaddition.
Nature, 522, 2015
4ZA7
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STRUCTURE OF A. NIGER FDC1 IN COMPLEX WITH ALPHA-METHYL CINNAMIC ACID
Descriptor:Fdc1, 1-deoxy-5-O-phosphono-1-(3,3,4,5-tetramethyl-9,11-dioxo-2,3,8,9,10,11-hexahydro-7H-quinolino[1,8-fg]pteridin-12-ium-7-yl)-D-ribitol, 1-deoxy-5-O-phosphono-1-[(10aR)-2,2,3,4-tetramethyl-8,10-dioxo-1,2,8,9,10,10a-hexahydro-6H-indeno[1,7-ef]pyrimido[4,5-b][1,4]diazepin-6-yl]-D-ribitol, ...
Authors:Payne, K.A.P., Leys, D.
Deposit date:2015-04-13
Release date:2015-06-17
Last modified:2015-07-01
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:New cofactor supports alpha , beta-unsaturated acid decarboxylation via 1,3-dipolar cycloaddition.
Nature, 522, 2015
4ZA8
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CRYSTAL STRUCTURE OF A NIGER FDC1 IN COMPLEX WITH PENTA-FLUOROCINNAMIC ACID
Descriptor:Putative uncharacterized protein An03g06590, 1-deoxy-5-O-phosphono-1-(3,3,4,5-tetramethyl-9,11-dioxo-2,3,8,9,10,11-hexahydro-7H-quinolino[1,8-fg]pteridin-12-ium-7-yl)-D-ribitol, 1-deoxy-5-O-phosphono-1-[(10aR)-2,2,3,4-tetramethyl-8,10-dioxo-1,2,8,9,10,10a-hexahydro-6H-indeno[1,7-ef]pyrimido[4,5-b][1,4]diazepin-6-yl]-D-ribitol, ...
Authors:Payne, K.A.P., Leys, D.
Deposit date:2015-04-13
Release date:2015-06-17
Last modified:2015-07-01
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:New cofactor supports alpha , beta-unsaturated acid decarboxylation via 1,3-dipolar cycloaddition.
Nature, 522, 2015
4ZA9
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STRUCTURE OF A. NIGER FDC1 IN COMPLEX WITH A PHENYLPYRUVATE DERIVED ADDUCT TO THE PRENYLATED FLAVIN COFACTOR
Descriptor:fdc1, 1-deoxy-5-O-phosphono-1-[(1S)-3,3,4,5-tetramethyl-9,11-dioxo-1-(phenylacetyl)-2,3,8,9,10,11-hexahydro-1H,7H-quinolino[1,8-fg]pteridin-7-yl]-D-ribitol, MANGANESE (II) ION, ...
Authors:Payne, K.A.P., Leys, D.
Deposit date:2015-04-13
Release date:2015-06-17
Last modified:2015-07-01
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:New cofactor supports alpha , beta-unsaturated acid decarboxylation via 1,3-dipolar cycloaddition.
Nature, 522, 2015
4ZAA
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STRUCTURE OF A. NIGER FDC1 IN COMPLEX WITH 4-VINYL GUAIACOL
Descriptor:fdc1, 1-deoxy-5-O-phosphono-1-(3,3,4,5-tetramethyl-9,11-dioxo-2,3,8,9,10,11-hexahydro-7H-quinolino[1,8-fg]pteridin-12-ium-7-yl)-D-ribitol, 1-deoxy-5-O-phosphono-1-[(10aR)-2,2,3,4-tetramethyl-8,10-dioxo-1,2,8,9,10,10a-hexahydro-6H-indeno[1,7-ef]pyrimido[4,5-b][1,4]diazepin-6-yl]-D-ribitol, ...
Authors:Payne, K.A.P., Leys, D.
Deposit date:2015-04-13
Release date:2015-06-17
Last modified:2015-07-01
Method:X-RAY DIFFRACTION (1.242 Å)
Cite:New cofactor supports alpha , beta-unsaturated acid decarboxylation via 1,3-dipolar cycloaddition.
Nature, 522, 2015
4ZAB
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STRUCTURE OF A. NIGER FDC1 IN COMPLEX WITH ALPHA-FLUORO CINNAMIC ACID
Descriptor:A niger Fdc1, 1-deoxy-5-O-phosphono-1-(3,3,4,5-tetramethyl-9,11-dioxo-2,3,8,9,10,11-hexahydro-7H-quinolino[1,8-fg]pteridin-12-ium-7-yl)-D-ribitol, 1-deoxy-5-O-phosphono-1-[(10aR)-2,2,3,4-tetramethyl-8,10-dioxo-1,2,8,9,10,10a-hexahydro-6H-indeno[1,7-ef]pyrimido[4,5-b][1,4]diazepin-6-yl]-D-ribitol, ...
Authors:Payne, K.A.P., Leys, D.
Deposit date:2015-04-13
Release date:2015-06-17
Last modified:2017-06-14
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:New cofactor supports alpha , beta-unsaturated acid decarboxylation via 1,3-dipolar cycloaddition.
Nature, 522, 2015
4ZAC
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STRUCTURE OF S. CEREVISIAE FDC1 WITH THE PRENYLATED-FLAVIN COFACTOR IN THE IMINIUM FORM.
Descriptor:Ferulic acid decarboxylase 1, SODIUM ION, POTASSIUM ION, ...
Authors:White, M.D., Leys, D.
Deposit date:2015-04-13
Release date:2015-06-17
Last modified:2015-07-01
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:New cofactor supports alpha , beta-unsaturated acid decarboxylation via 1,3-dipolar cycloaddition.
Nature, 522, 2015
4ZAD
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STRUCTURE OF C. DUBLIENSIS FDC1 WITH THE PRENYLATED-FLAVIN COFACTOR IN THE IMINIUM FORM.
Descriptor:Fdc1, MANGANESE (II) ION, POTASSIUM ION, ...
Authors:Bailey, S.S., Leys, D.
Deposit date:2015-04-13
Release date:2015-06-17
Last modified:2015-07-01
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:New cofactor supports alpha , beta-unsaturated acid decarboxylation via 1,3-dipolar cycloaddition.
Nature, 522, 2015
5M1B
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CRYSTAL STRUCTURE OF C-TERMINALLY TAGGED APO-UBID FROM E. COLI
Descriptor:3-octaprenyl-4-hydroxybenzoate carboxy-lyase
Authors:White, M., Leys, D.
Deposit date:2016-10-07
Release date:2017-01-11
Last modified:2017-08-30
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Oxidative Maturation and Structural Characterization of Prenylated FMN Binding by UbiD, a Decarboxylase Involved in Bacterial Ubiquinone Biosynthesis.
J. Biol. Chem., 292, 2017
5M1C
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CRYSTAL STRUCTURE OF N-TERMINALLY TAGGED APO-UBID FROM E. COLI
Descriptor:3-octaprenyl-4-hydroxybenzoate carboxy-lyase, TETRAETHYLENE GLYCOL
Authors:Marshall, S.A., Leys, D.
Deposit date:2016-10-07
Release date:2017-01-11
Last modified:2017-03-29
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Oxidative Maturation and Structural Characterization of Prenylated FMN Binding by UbiD, a Decarboxylase Involved in Bacterial Ubiquinone Biosynthesis.
J. Biol. Chem., 292, 2017
5M1D
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CRYSTAL STRUCTURE OF N-TERMINALLY TAGGED UBID FROM E. COLI RECONSTITUTED WITH PRFMN COFACTOR
Descriptor:3-octaprenyl-4-hydroxybenzoate carboxy-lyase, MANGANESE (II) ION, 1-deoxy-5-O-phosphono-1-(3,3,4,5-tetramethyl-9,11-dioxo-2,3,8,9,10,11-hexahydro-7H-quinolino[1,8-fg]pteridin-12-ium-7-yl)-D-ribitol, ...
Authors:Marshall, S.A., Leys, D.
Deposit date:2016-10-07
Release date:2017-01-11
Last modified:2017-03-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Oxidative Maturation and Structural Characterization of Prenylated FMN Binding by UbiD, a Decarboxylase Involved in Bacterial Ubiquinone Biosynthesis.
J. Biol. Chem., 292, 2017
5M1E
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CRYSTAL STRUCTURE OF N-TERMINALLY TAGGED UBID FROM E. COLI RECONSTITUTED WITH PRFMN COFACTOR
Descriptor:3-octaprenyl-4-hydroxybenzoate carboxy-lyase, MANGANESE (II) ION, (16~{R})-11,12,14,14-tetramethyl-3,5-bis(oxidanylidene)-8-[(2~{S},3~{S},4~{R})-2,3,4-tris(oxidanyl)-5-phosphonooxy-pentyl]-1,4,6,8-tetrazatetracyclo[7.7.1.0^{2,7}.0^{13,17}]heptadeca-2(7),9(17),10,12-tetraene-16-sulfonic acid, ...
Authors:Marshall, S.A., Leys, D.
Deposit date:2016-10-07
Release date:2017-01-11
Last modified:2017-03-29
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Oxidative Maturation and Structural Characterization of Prenylated FMN Binding by UbiD, a Decarboxylase Involved in Bacterial Ubiquinone Biosynthesis.
J. Biol. Chem., 292, 2017
5NY5
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THE APO STRUCTURE OF 3,4-DIHYDROXYBENZOIC ACID DECARBOXYLASES FROM ENTEROBACTER CLOACAE
Descriptor:3,4-dihydroxybenzoate decarboxylase, GLYCEROL
Authors:Dordic, A., Gruber, K., Payer, S., Glueck, S., Pavkov-Keller, T., Marshall, S., Leys, D.
Deposit date:2017-05-11
Release date:2017-09-13
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:Regioselective para-Carboxylation of Catechols with a Prenylated Flavin Dependent Decarboxylase.
Angew. Chem. Int. Ed. Engl., 56, 2017
5O3M
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CRYSTAL STRUCTURE OF APO KLEBSIELLA PNEUMONIAE 3,4-DIHYDROXYBENZOIC ACID DECARBOXYLASE (AROY)
Descriptor:Protocatechuate decarboxylase, pentane-1,5-diol
Authors:Marshall, S.A., Leys, D.
Deposit date:2017-05-24
Release date:2017-09-13
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Regioselective para-Carboxylation of Catechols with a Prenylated Flavin Dependent Decarboxylase.
Angew. Chem. Int. Ed. Engl., 56, 2017
5O3N
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CRYSTAL STRUCTURE OF E. CLOACAE 3,4-DIHYDROXYBENZOIC ACID DECARBOXYLASE (AROY) RECONSTITUTED WITH PRFMN
Descriptor:3,4-dihydroxybenzoate decarboxylase, MANGANESE (II) ION, SODIUM ION, ...
Authors:Marshall, S.A., Leys, D.
Deposit date:2017-05-24
Release date:2017-09-13
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Regioselective para-Carboxylation of Catechols with a Prenylated Flavin Dependent Decarboxylase.
Angew. Chem. Int. Ed. Engl., 56, 2017
6EV3
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STRUCTURE OF WILD TYPE A. NIGER FDC1 THAT HAS BEEN ILLUMINATED WITH UV LIGHT, WITH PRFMN IN THE IMINIUM AND KETIMINE FORM
Descriptor:Ferulic acid decarboxylase 1, 1-deoxy-5-O-phosphono-1-(3,3,4,5-tetramethyl-9,11-dioxo-2,3,8,9,10,11-hexahydro-7H-quinolino[1,8-fg]pteridin-12-ium-7-yl)-D-ribitol, MANGANESE (II) ION, ...
Authors:Bailey, S.S., David, L., Payne, K.A.P.
Deposit date:2017-11-01
Release date:2017-12-20
Last modified:2018-02-28
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The role of conserved residues in Fdc decarboxylase in prenylated flavin mononucleotide oxidative maturation, cofactor isomerization, and catalysis.
J. Biol. Chem., 293, 2018
6EV4
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STRUCTURE OF WILD TYPE A. NIGER FDC1 PURIFIED IN THE DARK WITH PRFMN IN THE IMINIUM FORM
Descriptor:Ferulic acid decarboxylase 1, 1-deoxy-5-O-phosphono-1-(3,3,4,5-tetramethyl-9,11-dioxo-2,3,8,9,10,11-hexahydro-7H-quinolino[1,8-fg]pteridin-12-ium-7-yl)-D-ribitol, MANGANESE (II) ION, ...
Authors:Bailey, S.S., David, L., Payne, K.A.P.
Deposit date:2017-11-01
Release date:2017-12-27
Last modified:2018-02-28
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:The role of conserved residues in Fdc decarboxylase in prenylated flavin mononucleotide oxidative maturation, cofactor isomerization, and catalysis.
J. Biol. Chem., 293, 2018
6EV5
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CRYSTAL STRUCTURE OF E282Q A. NIGER FDC1 WITH PRFMN IN THE HYDROXYLATED FORM
Descriptor:Ferulic acid decarboxylase 1, MANGANESE (II) ION, POTASSIUM ION, ...
Authors:Bailey, S.S., Leys, D., Payne, K.A.P.
Deposit date:2017-11-01
Release date:2017-12-20
Last modified:2018-02-28
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:The role of conserved residues in Fdc decarboxylase in prenylated flavin mononucleotide oxidative maturation, cofactor isomerization, and catalysis.
J. Biol. Chem., 293, 2018
6EV6
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STRUCTURE OF E282Q A. NIGER FDC1 WITH PRFMN IN THE HYDROXYLATED AND KETIMINE FORMS
Descriptor:Ferulic acid decarboxylase 1, MANGANESE (II) ION, POTASSIUM ION, ...
Authors:Bailey, S.S., David, L., Payne, K.A.P.
Deposit date:2017-11-01
Release date:2017-12-20
Last modified:2018-02-28
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:The role of conserved residues in Fdc decarboxylase in prenylated flavin mononucleotide oxidative maturation, cofactor isomerization, and catalysis.
J. Biol. Chem., 293, 2018
6EV7
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STRUCTURE OF E282D A. NIGER FDC1 WITH PRFMN IN THE IMINIUM FORM
Descriptor:Ferulic acid decarboxylase 1, MANGANESE (II) ION, POTASSIUM ION, ...
Authors:Bailey, S.S., Leys, D., Payne, K.A.P.
Deposit date:2017-11-01
Release date:2017-12-20
Last modified:2018-02-28
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:The role of conserved residues in Fdc decarboxylase in prenylated flavin mononucleotide oxidative maturation, cofactor isomerization, and catalysis.
J. Biol. Chem., 293, 2018
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