1J3G
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SOLUTION STRUCTURE OF CITROBACTER FREUNDII AMPD
Descriptor:AmpD protein, ZINC ION
Authors:Liepinsh, E., Genereux, C., Dehareng, D., Joris, B., Otting, G.
Deposit date:2003-01-31
Release date:2003-02-18
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:NMR Structure of Citrobacter freundii AmpD, Comparison with Bacteriophage T7 Lysozyme and Homology with PGRP Domains
J.Mol.Biol., 327, 2003
1LBA
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THE STRUCTURE OF BACTERIOPHAGE T7 LYSOZYME, A ZINC AMIDASE AND AN INHIBITOR OF T7 RNA POLYMERASE
Descriptor:T7 LYSOZYME, ZINC ION
Authors:Cheng, X.
Deposit date:1993-12-22
Release date:1994-04-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The structure of bacteriophage T7 lysozyme, a zinc amidase and an inhibitor of T7 RNA polymerase.
Proc.Natl.Acad.Sci.USA, 91, 1994
1OHT
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PEPTIDOGLYCAN RECOGNITION PROTEIN LB
Descriptor:CG14704 PROTEIN, ZINC ION, 1,2-ETHANEDIOL, ...
Authors:Kim, M.-S., Byun, M., Oh, B.-H.
Deposit date:2003-05-31
Release date:2003-07-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Peptidoglycan Recognition Protein Lb from Drosophila Melanogaster
Nat.Immunol., 4, 2003
1S2J
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CRYSTAL STRUCTURE OF THE DROSOPHILA PATTERN-RECOGNITION RECEPTOR PGRP-SA
Descriptor:Peptidoglycan recognition protein SA CG11709-PA, PHOSPHATE ION
Authors:Chang, C.-I., Pili-Floury, S., Chelliah, Y., Lemaitre, B., Mengin-Lecreulx, D., Deisenhofer, J.
Deposit date:2004-01-08
Release date:2004-09-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Drosophila pattern recognition receptor contains a peptidoglycan docking groove and unusual l,d-carboxypeptidase activity.
PLOS BIOL., 2, 2004
1SK3
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CRYSTAL STRUCTURE OF THE C-TERMINAL PEPTIDOGLYCAN-BINDING DOMAIN OF HUMAN PEPTIDOGLYCAN RECOGNITION PROTEIN IALPHA
Descriptor:Peptidoglycan recognition protein I-alpha, NICKEL (II) ION, SULFATE ION
Authors:Guan, R., Malchiodi, E.L., Qian, W., Schuck, P., Mariuzza, R.A.
Deposit date:2004-03-04
Release date:2004-07-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the C-terminal peptidoglycan-binding domain of human peptidoglycan recognition protein Ialpha
J.Biol.Chem., 279, 2004
1SK4
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CRYSTAL STRUCTURE OF THE C-TERMINAL PEPTIDOGLYCAN-BINDING DOMAIN OF HUMAN PEPTIDOGLYCAN RECOGNITION PROTEIN IALPHA
Descriptor:Peptidoglycan recognition protein I-alpha, SODIUM ION
Authors:Guan, R., Malchiodi, E.L., Qian, W., Schuck, P., Mariuzza, R.A.
Deposit date:2004-03-04
Release date:2004-07-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of the C-terminal peptidoglycan-binding domain of human peptidoglycan recognition protein Ialpha
J.Biol.Chem., 279, 2004
1SXR
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DROSOPHILA PEPTIDOGLYCAN RECOGNITION PROTEIN (PGRP)-SA
Descriptor:Peptidoglycan recognition protein SA CG11709-PA, SULFATE ION, 1,2-ETHANEDIOL
Authors:Reiser, J.B., Teyton, L., Wilson, I.A.
Deposit date:2004-03-31
Release date:2004-06-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Crystal structure of the Drosophila peptidoglycan recognition protein (PGRP)-SA at 1.56 A resolution
J.Mol.Biol., 340, 2004
1TWQ
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CRYSTAL STRUCTURE OF THE C-TERMINAL PGN-BINDING DOMAIN OF HUMAN PGRP-IALPHA IN COMPLEX WITH PGN ANALOG MURAMYL TRIPEPTIDE
Descriptor:peptidoglycan recognition protein-I-alpha, muramyl tripeptide, NICKEL (II) ION
Authors:Guan, R., Roychowdury, A., Boons, G.-A., Mariuzza, R.A.
Deposit date:2004-07-01
Release date:2004-12-14
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for peptidoglycan binding by peptidoglycan recognition proteins
Proc.Natl.Acad.Sci.USA, 101, 2004
1YB0
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STRUCTURE OF PLYL
Descriptor:prophage LambdaBa02, N-acetylmuramoyl-L-alanine amidase, family 2, ...
Authors:Low, L.Y., Yang, C., Perego, M., Osterman, A., Liddington, R.C.
Deposit date:2004-12-18
Release date:2005-08-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structure and lytic activity of a Bacillus anthracis prophage endolysin
J.Biol.Chem., 280, 2005
1YCK
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CRYSTAL STRUCTURE OF HUMAN PEPTIDOGLYCAN RECOGNITION PROTEIN (PGRP-S)
Descriptor:Peptidoglycan recognition protein
Authors:Guan, R., Wang, Q., Sundberg, E.J., Mariuzza, R.A.
Deposit date:2004-12-22
Release date:2005-03-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of human peptidoglycan recognition protein S (PGRP-S) at 1.70 A resolution.
J.Mol.Biol., 347, 2005
1Z6I
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CRYSTAL STRUCTURE OF THE ECTODOMAIN OF DROSOPHILA TRANSMEMBRANE RECEPTOR PGRP-LCA
Descriptor:Peptidoglycan-recognition protein-LC, N-ACETYL-D-GLUCOSAMINE, SULFATE ION
Authors:Chang, C.-I., Ihara, K., Chelliah, Y., Mengin-Lecreulx, D., Wakatsuki, S., Deisenhofer, J.
Deposit date:2005-03-22
Release date:2005-07-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the ectodomain of Drosophila peptidoglycan-recognition protein LCa suggests a molecular mechanism for pattern recognition
Proc.Natl.Acad.Sci.Usa, 102, 2005
2APH
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CRYSTAL STRUCTURE OF HUMAN PGRP-IALPHAC IN COMPLEX WITH MURAMYL PENTAPEPTIDE
Descriptor:Peptidoglycan recognition protein I-alpha, muramyl pentapeptide, SULFATE ION
Authors:Guan, R., Roychowdjury, A., Boons, G., Mariuzza, R.A.
Deposit date:2005-08-16
Release date:2006-06-27
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of human peptidoglycan recognition protein I alpha bound to a muramyl pentapeptide from Gram-positive bacteria.
Protein Sci., 15, 2006
2AR3
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E90A MUTANT STRUCTURE OF PLYL
Descriptor:prophage lambdaba02, n-acetylmuramoyl-l-alanine amidase, family 2, ...
Authors:Low, L.Y., Yang, C., Perego, M., Osterman, A., Liddington, R.C.
Deposit date:2005-08-19
Release date:2006-06-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and lytic activity of a Bacillus anthracis prophage endolysin.
J.Biol.Chem., 280, 2005
2BH7
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CRYSTAL STRUCTURE OF A SEMET DERIVATIVE OF AMID AT 2.2 ANGSTROMS
Descriptor:N-ACETYLMURAMOYL-L-ALANINE AMIDASE, ZINC ION, SULFATE ION
Authors:Petrella, S., Herman, R., Sauvage, E., Genereux, C., Pennartz, A., Joris, B., Charlier, P.
Deposit date:2005-01-07
Release date:2006-06-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Specific Structural Features of the N-Acetylmuramoyl-L-Alanine Amidase Amid from Escherichia Coli and Mechanistic Implications for Enzymes of This Family.
J.Mol.Biol., 397, 2010
2CB3
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CRYSTAL STRUCTURE OF PEPTIDOGLYCAN RECOGNITION PROTEIN-LE IN COMPLEX WITH TRACHEAL CYTOTOXIN (MONOMERIC DIAMINOPIMELIC ACID-TYPE PEPTIDOGLYCAN)
Descriptor:PEPTIDOGLYCAN-RECOGNITION PROTEIN-LE, GLYCEROL, GLCNAC(BETA1-4)-MURNAC(1,6-ANHYDRO)-L-ALA-GAMMA-D-GLU-MESO-A2PM-D-ALA
Authors:Lim, J.-H., Kim, M.-S., Oh, B.-H.
Deposit date:2005-12-29
Release date:2006-01-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis for Preferential Recognition of Diaminopimelic Acid-Type Peptidoglycan by a Subset of Peptidoglycan Recognition Proteins
J.Biol.Chem., 281, 2006
2EAV
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CRYSTAL STRUCTURE OF THE C-TERMINAL PEPTIDOGLYCAN-BINDING DOMAIN OF HUMAN PEPTIDOGLYCAN RECOGNITION PROTEIN IBETA
Descriptor:Peptidoglycan recognition protein-I-beta, NICKEL (II) ION
Authors:Cho, S., Mariuzza, R.A.
Deposit date:2007-02-03
Release date:2007-09-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into the bactericidal mechanism of human peptidoglycan recognition proteins
Proc.Natl.Acad.Sci.Usa, 104, 2007
2EAX
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CRYSTAL STRUCTURE OF HUMAN PGRP-IBETAC IN COMPLEX WITH GLYCOSAMYL MURAMYL PENTAPEPTIDE
Descriptor:Peptidoglycan recognition protein-I-beta, GLYCOSAMYL MURAMYL PENTAPEPTIDE, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Cho, S.
Deposit date:2007-02-03
Release date:2007-10-02
Last modified:2014-12-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insights into the bactericidal mechanism of human peptidoglycan recognition proteins
Proc.Natl.Acad.Sci.Usa, 104, 2007
2F2L
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CRYSTAL STRUCTURE OF TRACHEAL CYTOTOXIN (TCT) BOUND TO THE ECTODOMAIN COMPLEX OF PEPTIDOGLYCAN RECOGNITION PROTEINS LCA (PGRP-LCA) AND LCX (PGRP-LCX)
Descriptor:Peptidoglycan-recognition protein-LC isoform LCa, Peptidoglycan recognition protein-LC isoform LCx, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Chang, C.I., Deisenhofer, J.
Deposit date:2005-11-17
Release date:2006-04-04
Last modified:2011-10-05
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of tracheal cytotoxin in complex with a heterodimeric pattern-recognition receptor.
Science, 311, 2006
2L47
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SOLUTION STRUCTURE OF THE PLYG CATALYTIC DOMAIN
Descriptor:N-acetylmuramoyl-L-alanine amidase, ZINC ION
Authors:Volkman, B.F., Dias, J.S., Peterson, F.C.
Deposit date:2010-10-01
Release date:2011-10-12
Method:SOLUTION NMR
Cite:Tbd
To be Published
2R2K
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CRYSTAL STRUCTURE OF THE COMPLEX OF CAMEL PEPTIDOGLYCAN RECOGNITION PROTEIN WITH DISACCHARIDE AT 3.2A RESOLUTION
Descriptor:Peptidoglycan recognition protein, N-ACETYL-D-GLUCOSAMINE, L(+)-TARTARIC ACID
Authors:Sharma, P., Jain, R., Singh, N., Sharma, S., Bhushan, A., Kaur, P., Singh, T.P.
Deposit date:2007-08-26
Release date:2007-09-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Crystal structure of the complex of camel peptidoglycan recognition protein with disaccharide at 3.2A resolution
To be Published
2R90
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CRYSTAL STRUCTURE OF CAMELINE PEPTIDOGLYCAN RECOGNITION PROTEIN AT 2.8A RESOLUTION
Descriptor:Peptidoglycan recognition protein
Authors:Sharma, P., Singh, N., Sinha, M., Sharma, S., Kaur, P., Srinivasan, A., Singh, T.P.
Deposit date:2007-09-12
Release date:2007-09-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of cameline peptidoglycan recognition protein at 2.8A resolution
To be Published
2RKQ
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CRYSTAL STRUCTURE OF DROSOPHILA PEPTIDOGLYCAN RECOGNITION PROTEIN SD (PGRP-SD)
Descriptor:Peptidoglycan-recognition protein-SD
Authors:Roussel, A., Royet, J., Leone, P., Kellenberger, C.
Deposit date:2007-10-17
Release date:2008-03-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of Drosophila PGRP-SD suggests binding to DAP-type but not lysine-type peptidoglycan
Mol.Immunol., 45, 2008
2WKX
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CRYSTAL STRUCTURE OF THE NATIVE E. COLI ZINC AMIDASE AMID
Descriptor:N-ACETYLMURAMOYL-L-ALANINE AMIDASE AMID, ZINC ION, CHLORIDE ION, ...
Authors:Petrella, S., Kerff, F., Herman, R., Genereux, C., Pennartz, A., Sauvage, E., Joris, B., Charlier, P.
Deposit date:2009-06-18
Release date:2010-01-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Specific Structural Features of the N-Acetylmuramoyl-L-Alanine Amidase Amid from Escherichia Coli and Mechanistic Implications for Enzymes of This Family.
J.Mol.Biol., 397, 2010
2XZ4
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CRYSTAL STRUCTURE OF THE LFZ ECTODOMAIN OF THE PEPTIDOGLYCAN RECOGNITION PROTEIN LF
Descriptor:PEPTIDOGLYCAN-RECOGNITION PROTEIN LF, COPPER (II) ION, 1,2-ETHANEDIOL, ...
Authors:Basbous, N., Coste, F., Leone, P., Vincentelli, R., Royet, J., Kellenberger, C., Roussel, A.
Deposit date:2010-11-23
Release date:2011-04-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:The Drosophila Peptidoglycan-Recognition Protein Lf Interacts with Peptidoglycan-Recognition Protein Lc to Downregulate the Imd Pathway.
Embo Rep., 12, 2011
2Y28
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CRYSTAL STRUCTURE OF SE-MET AMPD DERIVATIVE
Descriptor:1,6-ANHYDRO-N-ACETYLMURAMYL-L-ALANINE AMIDASE AMPD, ZINC ION
Authors:Carrasco-Lopez, C., Rojas-Altuve, A., Zhang, W., Hesek, D., Lee, M., Barbe, S., Andre, I., Silva-Martin, N., Martinez-Ripoll, M., Mobashery, S., Hermoso, J.A.
Deposit date:2010-12-14
Release date:2011-07-20
Last modified:2011-12-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structures of Bacterial Peptidoglycan Amidase Ampd and an Unprecedented Activation Mechanism.
J.Biol.Chem., 286, 2011
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