1Q47
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STRUCTURE OF THE SEMAPHORIN 3A RECEPTOR-BINDING MODULE
Descriptor:Semaphorin 3A, N-ACETYL-D-GLUCOSAMINE
Authors:Antipenko, A., Himanen, J.-P., van Leyen, K., Nardi-Dei, V., Lesniak, J., Barton, W.A., Rajashankar, K.R., Lu, M., Hoemme, C., Puschel, A., Nikolov, D.
Deposit date:2003-08-01
Release date:2004-08-03
Last modified:2017-02-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the semaphorin-3A receptor binding module.
Neuron, 39, 2003
3NVX
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MOLECULAR MECHANISM OF GUIDANCE CUE RECOGNITION
Descriptor:Protein A39, N-ACETYL-D-GLUCOSAMINE
Authors:Liu, H., Juo, Z., Shim, A., Focia, P., Chen, X., Garcia, C., He, X.
Deposit date:2010-07-08
Release date:2010-09-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis of Semaphorin-Plexin Recognition and Viral Mimicry from Sema7A and A39R Complexes with PlexinC1.
Cell(Cambridge,Mass.), 142, 2010
4FWW
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CRYSTAL STRUCTURE OF THE SEMA-PSI EXTRACELLULAR DOMAINS OF HUMAN RON RECEPTOR TYROSINE KINASE
Descriptor:Macrophage-stimulating protein receptor, N-ACETYL-D-GLUCOSAMINE, BETA-D-MANNOSE, ...
Authors:Chao, K.L., Herzberg, O.
Deposit date:2012-07-02
Release date:2012-08-08
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of the Sema-PSI Extracellular Domain of Human RON Receptor Tyrosine Kinase.
Plos One, 7, 2012
4GZ8
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MOUSE SEMAPHORIN 3A, DOMAINS SEMA-PSI-IG
Descriptor:Semaphorin-3A, N-ACETYL-D-GLUCOSAMINE, BETA-D-MANNOSE, ...
Authors:Janssen, B.J.C., Malinauskas, T., Siebold, C., Jones, E.Y.
Deposit date:2012-09-06
Release date:2012-10-17
Last modified:2012-12-26
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Neuropilins lock secreted semaphorins onto plexins in a ternary signaling complex.
Nat.Struct.Mol.Biol., 19, 2012
3AFC
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MOUSE SEMAPHORIN 6A EXTRACELLULAR DOMAIN
Descriptor:Semaphorin-6A, N-ACETYL-D-GLUCOSAMINE
Authors:Yasui, N., Nogi, T., Mihara, E., Takagi, J.
Deposit date:2010-02-26
Release date:2010-10-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for semaphorin signalling through the plexin receptor.
Nature, 467, 2010
3AL8
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PLEXIN A2 / SEMAPHORIN 6A COMPLEX
Descriptor:Semaphorin-6A, Plexin-A2, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Nogi, T., Yasui, N., Mihara, E., Takagi, J.
Deposit date:2010-07-28
Release date:2010-10-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural basis for semaphorin signalling through the plexin receptor.
Nature, 467, 2010
3AL9
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MOUSE PLEXIN A2 EXTRACELLULAR DOMAIN
Descriptor:Plexin-A2, 1,2-ETHANEDIOL, N-ACETYL-D-GLUCOSAMINE
Authors:Nogi, T., Yasui, N., Mihara, E., Takagi, J.
Deposit date:2010-07-28
Release date:2010-10-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for semaphorin signalling through the plexin receptor.
Nature, 467, 2010
3NVN
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MOLECULAR MECHANISM OF GUIDANCE CUE RECOGNITION
Descriptor:EVM139, Plexin-C1, 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE, ...
Authors:Liu, H., Juo, Z., Shim, A., Focia, P., Chen, X., Garcia, C., He, X.
Deposit date:2010-07-08
Release date:2010-09-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structural Basis of Semaphorin-Plexin Recognition and Viral Mimicry from Sema7A and A39R Complexes with PlexinC1.
Cell(Cambridge,Mass.), 142, 2010
3NVQ
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MOLECULAR MECHANISM OF GUIDANCE CUE RECOGNITION
Descriptor:Semaphorin-7A, Plexin-C1, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Juo, Z., Liu, H., Shim, A., Focia, P., Chen, X., Garcia, C., He, X.
Deposit date:2010-07-08
Release date:2010-09-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis of Semaphorin-Plexin Recognition and Viral Mimicry from Sema7A and A39R Complexes with PlexinC1.
Cell(Cambridge,Mass.), 142, 2010
3OKT
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MOUSE PLEXIN A2, EXTRACELLULAR DOMAINS 1-4
Descriptor:Plexin-A2, N-ACETYL-D-GLUCOSAMINE, CHLORIDE ION, ...
Authors:Janssen, B.J.C., Robinson, R.A., Bell, C.H., Siebold, C., Jones, E.Y.
Deposit date:2010-08-25
Release date:2010-10-13
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.296 Å)
Cite:Structural basis of semaphorin-plexin signalling.
Nature, 467, 2010
3OKW
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MOUSE SEMAPHORIN 6A, EXTRACELLULAR DOMAINS 1-2
Descriptor:Semaphorin-6A, N-ACETYL-D-GLUCOSAMINE, CITRIC ACID, ...
Authors:Janssen, B.J.C., Robinson, R.A., Bell, C.H., Siebold, C., Jones, E.Y.
Deposit date:2010-08-25
Release date:2010-10-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.299 Å)
Cite:Structural basis of semaphorin-plexin signalling.
Nature, 467, 2010
3OKY
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PLEXIN A2 IN COMPLEX WITH SEMAPHORIN 6A
Descriptor:Plexin-A2, Putative uncharacterized protein, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Janssen, B.J.C., Robinson, R.A., Bell, C.H., Siebold, C., Jones, E.Y.
Deposit date:2010-08-25
Release date:2010-10-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.195 Å)
Cite:Structural basis of semaphorin-plexin signalling.
Nature, 467, 2010
4GZA
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COMPLEX OF MOUSE PLEXIN A2 - SEMAPHORIN 3A - NEUROPILIN-1
Descriptor:Plexin-A2, Semaphorin-3A, Neuropilin-1, ...
Authors:Janssen, B.J.C., Malinauskas, T., Siebold, C., Jones, E.Y.
Deposit date:2012-09-06
Release date:2012-10-17
Last modified:2012-12-26
Method:X-RAY DIFFRACTION (7 Å)
Cite:Neuropilins lock secreted semaphorins onto plexins in a ternary signaling complex.
Nat.Struct.Mol.Biol., 19, 2012
4QT8
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CRYSTAL STRUCTURE OF RON SEMA-PSI-IPT1 EXTRACELLULAR DOMAINS IN COMPLEX WITH MSP BETA-CHAIN
Descriptor:Macrophage-stimulating protein receptor, Hepatocyte growth factor-like protein, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Herzberg, O., Chao, K.L.
Deposit date:2014-07-07
Release date:2014-09-17
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for the binding specificity of human Recepteur d'Origine Nantais (RON) receptor tyrosine kinase to macrophage-stimulating protein.
J.Biol.Chem., 289, 2014
5B4W
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CRYSTAL STRUCTURE OF PLEXIN INHIBITOR COMPLEX
Descriptor:Plexin-B1, Synthesized cyclic peptide, N-ACETYL-D-GLUCOSAMINE
Authors:Matsunaga, Y., Kitago, Y., Arimori, T., Takagi, J.
Deposit date:2016-04-19
Release date:2016-12-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Allosteric Inhibition of a Semaphorin 4D Receptor Plexin B1 by a High-Affinity Macrocyclic Peptide
Cell Chem Biol, 23, 2016
5L56
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PLEXIN A1 FULL EXTRACELLULAR REGION, DOMAINS 1 TO 10, TO 4 ANGSTROM
Descriptor:Plexin-A1, N-ACETYL-D-GLUCOSAMINE, BETA-D-MANNOSE, ...
Authors:Janssen, B.J.C., Kong, Y., Malinauskas, T., Vangoor, V.R., Coles, C.H., Kaufmann, R., Ni, T., Gilbert, R.J.C., Padilla-Parra, S., Pasterkamp, R.J., Jones, E.Y.
Deposit date:2016-05-28
Release date:2016-07-06
Last modified:2018-09-19
Method:X-RAY DIFFRACTION (4 Å)
Cite:Structural Basis for Plexin Activation and Regulation.
Neuron, 91, 2016
5L59
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PLEXIN A1 FULL EXTRACELLULAR REGION, DOMAINS 1 TO 10, TO 6 ANGSTROM, SPACEGROUP P2(1)
Descriptor:Plexin-A1, N-ACETYL-D-GLUCOSAMINE, BETA-D-MANNOSE, ...
Authors:Janssen, B.J.C., Kong, Y., Malinauskas, T., Vangoor, V.R., Coles, C.H., Kaufmann, R., Ni, T., Gilbert, R.J.C., Padilla-Parra, S., Pasterkamp, R.J., Jones, E.Y.
Deposit date:2016-05-28
Release date:2016-07-06
Last modified:2018-10-24
Method:X-RAY DIFFRACTION (6 Å)
Cite:Structural Basis for Plexin Activation and Regulation.
Neuron, 91, 2016
5L5C
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PLEXIN A1 FULL EXTRACELLULAR REGION, DOMAINS 1 TO 10, TO 6 ANGSTROM, SPACEGROUP P4(3)2(1)2
Descriptor:Plexin-A1, N-ACETYL-D-GLUCOSAMINE, BETA-D-MANNOSE, ...
Authors:Janssen, B.J.C., Kong, Y., Malinauskas, T., Vangoor, V.R., Coles, C.H., Kaufmann, R., Ni, T., Gilbert, R.J.C., Padilla-Parra, S., Pasterkamp, R.J., Jones, E.Y.
Deposit date:2016-05-28
Release date:2016-07-06
Last modified:2018-10-24
Method:X-RAY DIFFRACTION (6 Å)
Cite:Structural Basis for Plexin Activation and Regulation.
Neuron, 91, 2016
5L5G
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PLEXIN A2 FULL EXTRACELLULAR REGION, DOMAINS 1 TO 8 MODELED, DATA TO 10 ANGSTROM
Descriptor:Plexin-A2
Authors:Janssen, B.J.C., Kong, Y., Malinauskas, T., Vangoor, V.R., Coles, C.H., Kaufmann, R., Ni, T., Gilbert, R.J.C., Padilla-Parra, S., Pasterkamp, R.J., Jones, E.Y.
Deposit date:2016-05-28
Release date:2016-07-06
Last modified:2018-10-24
Method:X-RAY DIFFRACTION (10 Å)
Cite:Structural Basis for Plexin Activation and Regulation.
Neuron, 91, 2016
5L5K
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PLEXIN A4 FULL EXTRACELLULAR REGION, DOMAINS 1 TO 10, DATA TO 7.5 ANGSTROM, SPACEGROUP P4(1)
Descriptor:Plexin-A4
Authors:Janssen, B.J.C., Kong, Y., Malinauskas, T., Vangoor, V.R., Coles, C.H., Kaufmann, R., Ni, T., Gilbert, R.J.C., Padilla-Parra, S., Pasterkamp, R.J., Jones, E.Y.
Deposit date:2016-05-28
Release date:2016-07-06
Last modified:2018-10-24
Method:X-RAY DIFFRACTION (7.501 Å)
Cite:Structural Basis for Plexin Activation and Regulation.
Neuron, 91, 2016
5L5L
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PLEXIN A4 FULL EXTRACELLULAR REGION, DOMAINS 1 TO 8 MODELED, DATA TO 8 ANGSTROM, SPACEGROUP P2(1)
Descriptor:Plexin-A4
Authors:Janssen, B.J.C., Kong, Y., Malinauskas, T., Vangoor, V.R., Coles, C.H., Kaufmann, R., Ni, T., Gilbert, R.J.C., Padilla-Parra, S., Pasterkamp, R.J., Jones, E.Y.
Deposit date:2016-05-28
Release date:2016-07-06
Last modified:2018-10-24
Method:X-RAY DIFFRACTION (8.001 Å)
Cite:Structural Basis for Plexin Activation and Regulation.
Neuron, 91, 2016
5L5M
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PLEXIN A4 FULL EXTRACELLULAR REGION, DOMAINS 1 TO 7 MODELED, DATA TO 8 ANGSTROM, SPACEGROUP P4(3)2(1)2
Descriptor:Plexin-A4
Authors:Janssen, B.J.C., Kong, Y., Malinauskas, T., Vangoor, V.R., Coles, C.H., Kaufmann, R., Ni, T., Gilbert, R.J.C., Padilla-Parra, S., Pasterkamp, R.J., Jones, E.Y.
Deposit date:2016-05-28
Release date:2016-07-06
Last modified:2018-10-24
Method:X-RAY DIFFRACTION (8 Å)
Cite:Structural Basis for Plexin Activation and Regulation.
Neuron, 91, 2016
5L5N
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PLEXIN A4 FULL EXTRACELLULAR REGION, DOMAINS 1 TO 7 MODELED, DATA TO 8.5 ANGSTROM, SPACEGROUP P4(3)22
Descriptor:Plexin-A4
Authors:Janssen, B.J.C., Kong, Y., Malinauskas, T., Vangoor, V.R., Coles, C.H., Kaufmann, R., Ni, T., Gilbert, R.J.C., Padilla-Parra, S., Pasterkamp, R.J., Jones, E.Y.
Deposit date:2016-05-28
Release date:2016-07-06
Last modified:2018-10-24
Method:X-RAY DIFFRACTION (8.502 Å)
Cite:Structural Basis for Plexin Activation and Regulation.
Neuron, 91, 2016
1OLZ
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THE LIGAND-BINDING FACE OF THE SEMAPHORINS REVEALED BY THE HIGH RESOLUTION CRYSTAL STRUCTURE OF SEMA4D
Descriptor:SEMAPHORIN 4D
Authors:Love, C.A., Harlos, K., Mavaddat, N., Davis, S.J., Stuart, D.I., Jones, E.Y., Esnouf, R.M.
Deposit date:2003-08-19
Release date:2003-09-11
Last modified:2018-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Ligand-Binding Face of the Semaphorins Revealed by the High-Resolution Crystal Structure of Sema4D
Nat.Struct.Biol., 10, 2003
1SHY
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THE CRYSTAL STRUCTURE OF HGF BETA-CHAIN IN COMPLEX WITH THE SEMA DOMAIN OF THE MET RECEPTOR.
Descriptor:Hepatocyte growth factor, Hepatocyte growth factor receptor
Authors:Stamos, J., Wiesmann, C.
Deposit date:2004-02-26
Release date:2004-06-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.22 Å)
Cite:Crystal structure of the HGF beta-chain in complex with the Sema domain of the Met receptor.
Embo J., 23, 2004
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