Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8OFD
DownloadVisualize
BU of 8ofd by Molmil
Crystal structure of beta-conglutin from Lupinus albus refined to 2.81 A
Descriptor: ACETATE ION, Conglutin beta 1, POTASSIUM ION, ...
Authors:Dolot, R.M, O'Sullivan, C.K, Jauset-Rubio, M.
Deposit date:2023-03-15
Release date:2023-06-14
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:First crystal structure of beta-conglutin, a major lupin allergen from Lupinus albus seeds
To Be Published
7U1J
DownloadVisualize
BU of 7u1j by Molmil
Crystal structure of Pisum sativum convicilin
Descriptor: Convicilin
Authors:Bakestani, I.D, Robinson, K.A, Loewen, M.C.
Deposit date:2022-02-21
Release date:2022-03-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:Pea and lentil 7S globulin crystal structures with comparative immunoglobulin epitope mapping.
Food Chem (Oxf), 5, 2022
7U1I
DownloadVisualize
BU of 7u1i by Molmil
Crystal structure of Pisum sativum vicilin
Descriptor: Vicilin
Authors:Beavington, B.A.G, Bakestani, I.D, Robinson, K.A, Loewen, M.C.
Deposit date:2022-02-21
Release date:2022-03-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Pea and lentil 7S globulin crystal structures with comparative immunoglobulin epitope mapping.
Food Chem (Oxf), 5, 2022
7U1H
DownloadVisualize
BU of 7u1h by Molmil
Crystal structure of Lens culinaris vicilin
Descriptor: Allergen Len c 1.0101
Authors:Robinson, K.A, Bakestani, I.D, Loewen, M.C.
Deposit date:2022-02-21
Release date:2022-03-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Pea and lentil 7S globulin crystal structures with comparative immunoglobulin epitope mapping.
Food Chem (Oxf), 5, 2022
6V7L
DownloadVisualize
BU of 6v7l by Molmil
The structure of the P212121 crystal form of canavalin at 173 K
Descriptor: BENZOIC ACID, Canavalin
Authors:McPherson, A.
Deposit date:2019-12-08
Release date:2020-02-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Binding of benzoic acid and anions within the cupin domains of the vicilin protein canavalin from jack bean (Canavalia ensiformis): Crystal structures.
Biochem.Biophys.Res.Commun., 524, 2020
6V7J
DownloadVisualize
BU of 6v7j by Molmil
The C2221 crystal form of canavalin at 173 K
Descriptor: BENZOIC ACID, CALCIUM ION, Canavalin, ...
Authors:McPherson, A.
Deposit date:2019-12-08
Release date:2020-02-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Binding of benzoic acid and anions within the cupin domains of the vicilin protein canavalin from jack bean (Canavalia ensiformis): Crystal structures.
Biochem.Biophys.Res.Commun., 524, 2020
6V7G
DownloadVisualize
BU of 6v7g by Molmil
Binding of Benzoic Acid and Anions Within the Cupin Domains of the Vicillin Protein Canavalin from Jack Bean (canavalia ensiformis): Crystal Structures
Descriptor: ACETATE ION, BENZOIC ACID, CITRIC ACID, ...
Authors:McPherson, A.
Deposit date:2019-12-08
Release date:2020-02-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Binding of benzoic acid and anions within the cupin domains of the vicilin protein canavalin from jack bean (Canavalia ensiformis): Crystal structures.
Biochem.Biophys.Res.Commun., 524, 2020
6UFI
DownloadVisualize
BU of 6ufi by Molmil
W96Y Oxalate Decarboxylase (Bacillus subtilis)
Descriptor: CHLORIDE ION, Cupin domain-containing protein, GLYCEROL, ...
Authors:Pastore, A.J, Burg, M.J, Twahir, U.T, Bruner, S.D, Angerhofer, A.
Deposit date:2019-09-24
Release date:2020-09-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Oxalate decarboxylase uses electron hole hopping for catalysis.
J.Biol.Chem., 297, 2021
6TZP
DownloadVisualize
BU of 6tzp by Molmil
W96F Oxalate Decarboxylase (B. subtilis)
Descriptor: MANGANESE (II) ION, Oxalate decarboxylase
Authors:Pastore, A.J, Burg, M.J, Twahir, U.T, Bruner, S.D, Angerhofer, A.
Deposit date:2019-08-12
Release date:2021-02-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Oxalate decarboxylase uses electron hole hopping for catalysis.
J.Biol.Chem., 297, 2021
6ORM
DownloadVisualize
BU of 6orm by Molmil
Crystal Structure of Peruvianin-I (Cysteine peptidase from Thevetia peruviana latex)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Peruvianin-I, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Cruz, W.T, Bezerra, E.H.S, da Silva, F.M.S, Freire, V.N, Ramos, M.V, Rocha, B.A.M, Freitas, C.D.T.
Deposit date:2019-04-30
Release date:2020-05-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure and specific location of a germin-like protein with proteolytic activity from Thevetia peruviana.
Plant Sci., 298, 2020
6L4M
DownloadVisualize
BU of 6l4m by Molmil
Crystal structure of vicilin from Solanum lycopersicum (tomato)
Descriptor: 2-HYDROXYBENZOIC ACID, Vicilin
Authors:Jain, A, Salunke, D.M.
Deposit date:2019-10-18
Release date:2019-12-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.302 Å)
Cite:Comparative study of 7S globulin from Corylus avellana and Solanum lycopersicum revealed importance of salicylic acid and Cu-binding loop in modulating their function.
Biochem.Biophys.Res.Commun., 522, 2020
6L4C
DownloadVisualize
BU of 6l4c by Molmil
Crystal structure of vicilin from Corylus avellana (Hazelnut)
Descriptor: 48-kDa glycoprotein, COPPER (II) ION
Authors:Shikhi, M, Salunke, D.M.
Deposit date:2019-10-16
Release date:2019-12-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.191 Å)
Cite:Comparative study of 7S globulin from Corylus avellana and Solanum lycopersicum revealed importance of salicylic acid and Cu-binding loop in modulating their function.
Biochem.Biophys.Res.Commun., 522, 2020
6B4S
DownloadVisualize
BU of 6b4s by Molmil
Crystal Structure of Brazil nut (Bertholletia excelsa) allergen Ber e 2
Descriptor: 11S globulin
Authors:Zhang, Y.Z, Guo, F.
Deposit date:2017-09-27
Release date:2018-12-12
Method:X-RAY DIFFRACTION (2.035 Å)
Cite:Crystal Structure of Brazil nut (Bertholletia excelsa) allergen Ber e 2
to be published
5YJS
DownloadVisualize
BU of 5yjs by Molmil
Structure of vicilin from Capsicum annuum
Descriptor: 2-HYDROXYBENZOIC ACID, CHLORIDE ION, COPPER (I) ION, ...
Authors:Shikhi, M, Nair, D.T, Salunke, D.M.
Deposit date:2017-10-11
Release date:2018-10-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structure-guided identification of function: role ofCapsicum annuumvicilin during oxidative stress.
Biochem. J., 475, 2018
5XTY
DownloadVisualize
BU of 5xty by Molmil
Crystal Structure of 11S allergen from Cocos nucifera L.
Descriptor: 11S globulin isoform 1
Authors:Vajravijayan, S, Nandhagopal, N, Gunasekaran, K.
Deposit date:2017-06-21
Release date:2018-06-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure determination and analysis of 11S coconut allergen: Cocosin
Mol. Immunol., 92, 2017
5WXU
DownloadVisualize
BU of 5wxu by Molmil
11S globulin from Wrightia tinctoria reveals auxin binding site
Descriptor: 11S globulin, 1H-INDOL-3-YLACETIC ACID, CITRATE ANION, ...
Authors:Kumar, P, Kesari, P, Dhindwal, S, Kumar, P.
Deposit date:2017-01-09
Release date:2018-05-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A novel function for globulin in sequestering plant hormone: Crystal structure of Wrightia tinctoria 11S globulin in complex with auxin.
Sci Rep, 7, 2017
5WPW
DownloadVisualize
BU of 5wpw by Molmil
Crystal structure of coconut allergen cocosin
Descriptor: 11S globulin isoform 1
Authors:Jin, T, Zhang, Y.
Deposit date:2016-11-21
Release date:2017-10-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.847 Å)
Cite:Crystal Structure of Cocosin, A Potential Food Allergen from Coconut (Cocos nucifera)
J. Agric. Food Chem., 65, 2017
5VG3
DownloadVisualize
BU of 5vg3 by Molmil
Structure of Oxalate Decarboxylase from Bacillus subtilis at pH 4.6
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, GLYCEROL, ...
Authors:Angerhofer, A, Burg, M.J.
Deposit date:2017-04-10
Release date:2017-10-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.451 Å)
Cite:Structure of Oxalate Decarboxylase from Bacillus subtilis at pH 4.6
To be Published
5VF5
DownloadVisualize
BU of 5vf5 by Molmil
Crystal structure of the vicilin from Solanum melongena, re-refinement
Descriptor: ACETATE ION, COPPER (II) ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Porebski, P.J, Wlodawer, A, Dauter, Z, Minor, W, Stanfield, R, Jaskolski, M, Pozharski, E, Weichenberger, C.X, Rupp, B.
Deposit date:2017-04-06
Release date:2017-12-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Detect, correct, retract: How to manage incorrect structural models.
FEBS J., 285, 2018
5HI0
DownloadVisualize
BU of 5hi0 by Molmil
The Substrate Binding Mode and Chemical Basis of a Reaction Specificity Switch in Oxalate Decarboxylase
Descriptor: COBALT (II) ION, OXALATE ION, Oxalate decarboxylase OxdC, ...
Authors:Zhu, W, Easthon, L.M, Reinhardt, L.A, Tu, C, Cohen, S.E, Silverman, D.N, Allen, K.N, Richards, N.G.J.
Deposit date:2016-01-11
Release date:2016-04-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.602 Å)
Cite:Substrate Binding Mode and Molecular Basis of a Specificity Switch in Oxalate Decarboxylase.
Biochemistry, 55, 2016
5E1R
DownloadVisualize
BU of 5e1r by Molmil
Crystal structure of pecan (carya illinoinensis) vicilin, a new food allergen
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 7S vicilin, COPPER (II) ION
Authors:Zhang, Y.Z.
Deposit date:2015-09-30
Release date:2016-08-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.651 Å)
Cite:Identification and Characterization of a New Pecan [Carya illinoinensis (Wangenh.) K. Koch] Allergen, Car i 2.
J.Agric.Food Chem., 64, 2016
5CAD
DownloadVisualize
BU of 5cad by Molmil
Crystal structure of the vicilin from Solanum melongena revealed existence of different anionic ligands in structurally similar pockets
Descriptor: ACETATE ION, MAGNESIUM ION, PYROGLUTAMIC ACID, ...
Authors:Jain, A, Kumar, A, Salunke, D.M.
Deposit date:2015-06-29
Release date:2016-04-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Crystal structure of the vicilin from Solanum melongena reveals existence of different anionic ligands in structurally similar pockets
Sci Rep, 6, 2016
4MET
DownloadVisualize
BU of 4met by Molmil
Assigning the EPR Fine Structure Parameters of the Mn(II) Centers in Bacillus subtilis Oxalate Decarboxylase by Site-Directed Mutagenesis and DFT/MM Calculations
Descriptor: COBALT (II) ION, Oxalate decarboxylase OxdC
Authors:Campomanes, P, Kellett, W.F, Easthon, L.M, Ozarowski, A, Allen, K.N, Angerhofer, A, Rothlisberger, U, Richards, N.G.J.
Deposit date:2013-08-27
Release date:2014-03-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.095 Å)
Cite:Assigning the EPR Fine Structure Parameters of the Mn(II) Centers in Bacillus subtilis Oxalate Decarboxylase by Site-Directed Mutagenesis and DFT/MM Calculations.
J.Am.Chem.Soc., 136, 2014
4LEJ
DownloadVisualize
BU of 4lej by Molmil
Crystal Structure of the Korean pine (Pinus koraiensis) vicilin
Descriptor: COPPER (II) ION, GLYCEROL, PHOSPHATE ION, ...
Authors:Jin, T.C, Wang, Y, Zhang, Y.Z.
Deposit date:2013-06-25
Release date:2014-01-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.402 Å)
Cite:Crystal Structure of Korean Pine ( Pinus koraiensis ) 7S Seed Storage Protein with Copper Ligands.
J.Agric.Food Chem., 62, 2014
3SMH
DownloadVisualize
BU of 3smh by Molmil
Crystal structure of major peanut allergen Ara h 1
Descriptor: Allergen Ara h 1, clone P41B
Authors:Cabanos, C.S, Mikami, B, Maruyama, N.
Deposit date:2011-06-28
Release date:2012-02-15
Last modified:2014-11-12
Method:X-RAY DIFFRACTION (2.433 Å)
Cite:Crystal structure of the major peanut allergen Ara h 1.
Mol.Immunol., 49, 2011

 

123>

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon