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3M5Q
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BU of 3m5q by Molmil
0.93 A Structure of Manganese-Bound Manganese Peroxidase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GLYCEROL, ...
Authors:Sundaramoorthy, M, Gold, M.H, Poulos, T.L.
Deposit date:2010-03-12
Release date:2010-04-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (0.93 Å)
Cite:Ultrahigh (0.93A) resolution structure of manganese peroxidase from Phanerochaete chrysosporium: implications for the catalytic mechanism.
J.Inorg.Biochem., 104, 2010
3FMU
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BU of 3fmu by Molmil
Crystal Structure Analysis of Fungal Versatile Peroxidase from Pleurotus eryngii
Descriptor: CACODYLATE ION, CALCIUM ION, FE (III) ION, ...
Authors:Piontek, K, Martinez, A.T, Choinowski, T, Plattner, D.A.
Deposit date:2008-12-22
Release date:2009-12-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Structural and Site-directed Mutagenesis Study of Versatile Peroxidase Oxidizing both Mn(II) and Aromatic Substrates
To be Published
4BLK
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BU of 4blk by Molmil
Crystal Structure of Fungal Versatile Peroxidase I from Pleurotus ostreatus - Crystal Form I
Descriptor: CALCIUM ION, PROTOPORPHYRIN IX CONTAINING FE, VERSATILE PEROXIDASE I
Authors:Medrano, F.J, Romero, A.
Deposit date:2013-05-03
Release date:2014-01-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.049 Å)
Cite:Ligninolytic Peroxidase Genes in the Oyster Mushroom Genome: Heterologous Expression, Molecular Structure, Catalytic and Stability Properties, and Lignin-Degrading Ability.
Biotechnol.Biofuels, 7, 2014
3M8M
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BU of 3m8m by Molmil
1.05 A Structure of Manganese-free Manganese Peroxidase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GLYCEROL, ...
Authors:Sundaramoorthy, M, Gold, M.H, Poulos, T.L.
Deposit date:2010-03-18
Release date:2010-04-14
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Ultrahigh (0.93A) resolution structure of manganese peroxidase from Phanerochaete chrysosporium: implications for the catalytic mechanism.
J.Inorg.Biochem., 104, 2010
7BIU
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BU of 7biu by Molmil
XFEL crystal structure of cytochrome c peroxidase compound II
Descriptor: Cytochrome c peroxidase, mitochondrial, HEME C
Authors:Kwon, H, Tosha, T, Sugimoto, H, Raven, E.L, Moody, P.C.E.
Deposit date:2021-01-13
Release date:2021-04-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:XFEL Crystal Structures of Peroxidase Compound II.
Angew.Chem.Int.Ed.Engl., 60, 2021
3E2O
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BU of 3e2o by Molmil
Crystal structure of cytochrome c peroxidase, N184R mutant
Descriptor: Cytochrome c peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Poulos, T.L, Meharenna, Y.T, Oertel, P.
Deposit date:2008-08-05
Release date:2008-10-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Engineering ascorbate peroxidase activity into cytochrome c peroxidase.
Biochemistry, 47, 2008
5ABO
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BU of 5abo by Molmil
CRYSTAL STRUCTURE ANALYSIS OF FUNGAL VERSATILE PEROXIDASE FROM PLEUROTUS ERYNGII. MUTANT VPi-br. MUTATED RESIDUES T2K, D69S, T70D, S86E, A131K, D146T, Q202L, Q219K, H232E, Q239R, L288R, S301K, A308R, A309K AND A314R.
Descriptor: CALCIUM ION, PROTOPORPHYRIN IX CONTAINING FE, VERSATILE PEROXIDASE VPL2
Authors:Medrano, F.J, Romero, A.
Deposit date:2015-08-07
Release date:2015-11-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.095 Å)
Cite:Improving the Ph-Stability of Versatile Peroxidase by Comparative Structural Analysis with a Naturally-Stable Manganese Peroxidase.
Plos One, 10, 2015
4BM1
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BU of 4bm1 by Molmil
CRYSTAL STRUCTURE OF MANGANESE PEROXIDASE 4 FROM PLEUROTUS OSTREATUS - CRYSTAL FORM I
Descriptor: CALCIUM ION, CITRIC ACID, MANGANESE PEROXIDASE 4, ...
Authors:Medrano, F.J, Romero, A.
Deposit date:2013-05-05
Release date:2014-01-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.098 Å)
Cite:Ligninolytic Peroxidase Genes in the Oyster Mushroom Genome: Heterologous Expression, Molecular Structure, Catalytic and Stability Properties, and Lignin-Degrading Ability.
Biotechnol.Biofuels, 7, 2014
4BLL
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BU of 4bll by Molmil
Crystal Structure of Fungal Versatile Peroxidase I from Pleurotus ostreatus - Crystal Form II
Descriptor: CALCIUM ION, PROTOPORPHYRIN IX CONTAINING FE, VERSATILE PEROXIDASE I, ...
Authors:Medrano, F.J, Romero, A.
Deposit date:2013-05-03
Release date:2014-01-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.099 Å)
Cite:Ligninolytic Peroxidase Genes in the Oyster Mushroom Genome: Heterologous Expression, Molecular Structure, Catalytic and Stability Properties, and Lignin-Degrading Ability.
Biotechnol.Biofuels, 7, 2014
2EUT
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BU of 2eut by Molmil
Cytochrome c peroxidase (CCP) in complex with 2-amino-4-picoline
Descriptor: 4-METHYLPYRIDIN-2-AMINE, PROTOPORPHYRIN IX CONTAINING FE, cytochrome c peroxidase
Authors:Brenk, R, Vetter, S.W, Boyce, S.E, Goodin, D.B, Shoichet, B.K.
Deposit date:2005-10-29
Release date:2006-04-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Probing molecular docking in a charged model binding site.
J.Mol.Biol., 357, 2006
1Z53
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BU of 1z53 by Molmil
The 1.13 Angstrom Structure of Iron-free Cytochrome c Peroxidase
Descriptor: Cytochrome c peroxidase, mitochondrial, PROTOPORPHYRIN IX
Authors:Bhaskar, B, Poulos, T.L.
Deposit date:2005-03-17
Release date:2005-06-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:The 1.13-A structure of iron-free cytochrome c peroxidase.
J.Biol.Inorg.Chem., 10, 2005
3FM6
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BU of 3fm6 by Molmil
Crystal Structure Analysis of Fungal Versatile Peroxidase from Pleurotus eryngii
Descriptor: CALCIUM ION, FE (III) ION, GLYCEROL, ...
Authors:Piontek, K, Martinez, A.T, Choinowski, T, Plattner, D.A.
Deposit date:2008-12-19
Release date:2009-12-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Structural and Site-directed Mutagenesis Study of Versatile Peroxidase Oxidizing both Mn(II) and Aromatic Substrates
To be Published
4BLN
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BU of 4bln by Molmil
CRYSTAL STRUCTURE OF FUNGAL VERSATILE PEROXIDASE I FROM PLEUROTUS OSTREATUS - CRYSTAL FORM III
Descriptor: CALCIUM ION, PROTOPORPHYRIN IX CONTAINING FE, VERSATILE PEROXIDASE I
Authors:Medrano, F.J, Romero, A.
Deposit date:2013-05-03
Release date:2014-01-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.149 Å)
Cite:Ligninolytic Peroxidase Genes in the Oyster Mushroom Genome: Heterologous Expression, Molecular Structure, Catalytic and Stability Properties, and Lignin-Degrading Ability.
Biotechnol.Biofuels, 7, 2014
8DJT
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BU of 8djt by Molmil
Cytosolic ascorbate peroxidase from Sorghum bicolor - four ascorbates complex
Descriptor: ASCORBIC ACID, GLYCEROL, L-ascorbate peroxidase, ...
Authors:Zhang, B, Kang, C.
Deposit date:2022-07-01
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:A sorghum ascorbate peroxidase with four binding sites has activity against ascorbate and phenylpropanoids.
Plant Physiol., 192, 2023
4NVB
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BU of 4nvb by Molmil
Predicting protein conformational response in prospective ligand discovery.
Descriptor: 2-AMINO-5-METHYLTHIAZOLE, Cytochrome c peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Fischer, M, Fraser, J.S.
Deposit date:2013-12-05
Release date:2013-12-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Incorporation of protein flexibility and conformational energy penalties in docking screens to improve ligand discovery.
Nat Chem, 6, 2014
8DJS
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BU of 8djs by Molmil
Cytosolic ascorbate peroxidase from Sorghum bicolor - one ascorbate complex
Descriptor: ASCORBIC ACID, GLYCEROL, L-ascorbate peroxidase, ...
Authors:Zhang, B, Kang, C.
Deposit date:2022-07-01
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:A sorghum ascorbate peroxidase with four binding sites has activity against ascorbate and phenylpropanoids.
Plant Physiol., 192, 2023
4JMW
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BU of 4jmw by Molmil
Crystal structure of Cytochrome C Peroxidase W191G-Gateless in complex with Phenol
Descriptor: Cytochrome c peroxidase, PHENOL, PROTOPORPHYRIN IX CONTAINING FE
Authors:Fischer, M, Fish, I.
Deposit date:2013-03-14
Release date:2013-05-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Blind prediction of charged ligand binding affinities in a model binding site.
J.Mol.Biol., 425, 2013
2VCN
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BU of 2vcn by Molmil
Structure of isoniazid (INH) bound to cytosolic soybean ascorbate peroxidase mutant W41A
Descriptor: 4-(DIAZENYLCARBONYL)PYRIDINE, ASCORBATE PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Metcalfe, C.L, Macdonald, I.K, Brown, K.A, Raven, E.L, Moody, P.C.E.
Deposit date:2007-09-25
Release date:2007-12-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:The Tuberculosis Prodrug Isoniazid Bound to Activating Peroxidases.
J.Biol.Chem., 283, 2008
1ZBY
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BU of 1zby by Molmil
High-Resolution Crystal Structure of Native (Resting) Cytochrome c Peroxidase (CcP)
Descriptor: Cytochrome c peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Bonagura, C.A, Bhaskar, B, Shimizu, H, Li, H, Sundaramoorthy, M, McRee, D.E, Goodin, D.B, Poulos, T.L.
Deposit date:2005-04-09
Release date:2005-05-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:High-resolution crystal structures and spectroscopy of native and compound I cytochrome c peroxidase
Biochemistry, 42, 2003
5U5V
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BU of 5u5v by Molmil
CcP gateless cavity
Descriptor: 1H-benzimidazol-4-amine, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Fischer, M, Shoichet, B.K.
Deposit date:2016-12-07
Release date:2017-02-01
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.222 Å)
Cite:Testing inhomogeneous solvation theory in structure-based ligand discovery.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5U61
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BU of 5u61 by Molmil
CcP gateless cavity
Descriptor: 5-cyclopropyl-1H-imidazol-2-amine, PROTOPORPHYRIN IX CONTAINING FE, Peroxidase
Authors:Fischer, M, Shoichet, B.K.
Deposit date:2016-12-07
Release date:2017-02-01
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.222 Å)
Cite:Testing inhomogeneous solvation theory in structure-based ligand discovery.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4NVH
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BU of 4nvh by Molmil
Predicting protein conformational response in prospective ligand discovery
Descriptor: 3-nitroquinolin-4-amine, Cytochrome c peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Fischer, M, Fraser, J.S.
Deposit date:2013-12-05
Release date:2013-12-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Incorporation of protein flexibility and conformational energy penalties in docking screens to improve ligand discovery.
Nat Chem, 6, 2014
2RBT
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BU of 2rbt by Molmil
n-methylbenzylamine in complex with Cytochrome C Peroxidase W191G
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Cytochrome C Peroxidase, N-methyl-1-phenylmethanamine, ...
Authors:Graves, A.P, Boyce, S.E, Shoichet, B.K.
Deposit date:2007-09-19
Release date:2008-04-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Rescoring docking hit lists for model cavity sites: predictions and experimental testing.
J.Mol.Biol., 377, 2008
4BLX
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BU of 4blx by Molmil
CRYSTAL STRUCTURE OF FUNGAL VERSATILE PEROXIDASE I FROM PLEUROTUS OSTREATUS - CRYSTAL FORM IV
Descriptor: CALCIUM ION, PROTOPORPHYRIN IX CONTAINING FE, VERSATILE PEROXIDASE I
Authors:Medrano, F.J, Romero, A.
Deposit date:2013-05-05
Release date:2014-01-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.249 Å)
Cite:Ligninolytic Peroxidase Genes in the Oyster Mushroom Genome: Heterologous Expression, Molecular Structure, Catalytic and Stability Properties, and Lignin-Degrading Ability.
Biotechnol.Biofuels, 7, 2014
2GHC
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BU of 2ghc by Molmil
Conformational mobility in the active site of a heme peroxidase
Descriptor: NITRIC OXIDE, PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION, ...
Authors:Badyal, S.K, Joyce, M.G, Sharp, K.H, Raven, E.L, Moody, P.C.
Deposit date:2006-03-27
Release date:2006-06-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Conformational Mobility in the Active Site of a Heme Peroxidase.
J.Biol.Chem., 281, 2006

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