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2FCW
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BU of 2fcw by Molmil
Structure of a Complex Between the Pair of the LDL Receptor Ligand-Binding Modules 3-4 and the Receptor Associated Protein (RAP).
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Alpha-2-macroglobulin receptor-associated protein, CALCIUM ION, ...
Authors:Beglova, N, Fisher, C, Blacklow, S.C.
Deposit date:2005-12-12
Release date:2006-05-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Structure of an LDLR-RAP Complex Reveals a General Mode for Ligand Recognition by Lipoprotein Receptors
Mol.Cell, 22, 2006
1AJJ
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BU of 1ajj by Molmil
LDL RECEPTOR LIGAND-BINDING MODULE 5, CALCIUM-COORDINATING
Descriptor: CALCIUM ION, LOW-DENSITY LIPOPROTEIN RECEPTOR, SULFATE ION
Authors:Fass, D, Blacklow, S.C, Kim, P.S, Berger, J.M.
Deposit date:1997-05-04
Release date:1997-07-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular basis of familial hypercholesterolaemia from structure of LDL receptor module.
Nature, 388, 1997
7UCX
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BU of 7ucx by Molmil
LRP8 11H1 Fab complexed to a cyclized CR1 peptide
Descriptor: 11H1 Fab Heavy chain, 11H1 Fab Light chain, Cyclized CR1 peptide, ...
Authors:Argiriadi, M.A, Deng, K, Egan, D, Gao, L, Gizatullin, F, Harlan, J, Karaoglu, D, Qiu, W, Goodearl, A.
Deposit date:2022-03-17
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:The use of cyclic peptide antigens to generate LRP8 specific antibodies
Front Drug Discov (Lausanne), 2, 2023
7QBF
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BU of 7qbf by Molmil
TC:CD320 in complex with nanobody TC-Nb34
Descriptor: 1,2-ETHANEDIOL, Anti-transcobalamin-2 nanobody TC-Nb34, CALCIUM ION, ...
Authors:Bloch, J.S, Locher, K.P.
Deposit date:2021-11-19
Release date:2022-03-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Generation of nanobodies targeting the human, transcobalamin-mediated vitamin B 12 uptake route.
Faseb J., 36, 2022
1J8E
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BU of 1j8e by Molmil
Crystal structure of ligand-binding repeat CR7 from LRP
Descriptor: CALCIUM ION, LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 1
Authors:Simonovic, M, Dolmer, K, Huang, W, Strickland, D.K, Volz, K, Gettins, P.G.W.
Deposit date:2001-05-21
Release date:2001-12-19
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Calcium coordination and pH dependence of the calcium affinity of ligand-binding repeat CR7 from the LRP. Comparison with related domains from the LRP and the LDL receptor.
Biochemistry, 40, 2001
5B4Y
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BU of 5b4y by Molmil
Crystal structure of the LA12 fragment of ApoER2
Descriptor: CALCIUM ION, Low-density lipoprotein receptor-related protein 8
Authors:Nogi, T, Tabata, S, Hirai, H, Yasui, N, Takagi, J.
Deposit date:2016-04-20
Release date:2017-04-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the ectodomain from a LDLR close homologue in complex with its physiological ligand.
To Be Published
8V14
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BU of 8v14 by Molmil
Structure of NRAP-1 and its role in NMDAR signaling
Descriptor: CALCIUM ION, NMDA receptor auxiliary protein
Authors:Whitby, F.G, Goodell, D.J, Maricq, A.V, Hill, C.P.
Deposit date:2023-11-19
Release date:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Functional and Structural Studies of NRAP-1 and NMDAR signaling
To Be Published
4ZRP
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BU of 4zrp by Molmil
TC:CD320
Descriptor: CALCIUM ION, CD320 antigen, CYANOCOBALAMIN, ...
Authors:Alam, A, Locher, K.P.
Deposit date:2015-05-12
Release date:2016-07-20
Last modified:2021-08-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of transcobalamin recognition by human CD320 receptor.
Nat Commun, 7, 2016
6CXO
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BU of 6cxo by Molmil
Complement component-9
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Complement component C9, ...
Authors:Law, R.H.P, Spicer, B.A, Caradoc-Davies, T.T.
Deposit date:2018-04-03
Release date:2018-09-05
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The first transmembrane region of complement component-9 acts as a brake on its self-assembly.
Nat Commun, 9, 2018
5OYL
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BU of 5oyl by Molmil
VSV G CR2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GLYCEROL, ...
Authors:Albertini, A.A, Belot, L, Legrand, P, Gaudin, Y.
Deposit date:2017-09-11
Release date:2018-03-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis for the recognition of LDL-receptor family members by VSV glycoprotein.
Nat Commun, 9, 2018
3OJY
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BU of 3ojy by Molmil
Crystal Structure of Human Complement Component C8
Descriptor: CALCIUM ION, Complement component C8 alpha chain, Complement component C8 beta chain, ...
Authors:Lovelace, L.L, Cooper, C.L, Sodetz, J.M, Lebioda, L.
Deposit date:2010-08-23
Release date:2011-04-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structure of human C8 protein provides mechanistic insight into membrane pore formation by complement.
J.Biol.Chem., 286, 2011
3A7Q
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BU of 3a7q by Molmil
Structural basis for specific recognition of reelin by its receptors
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Yasui, N, Nogi, T, Takagi, J.
Deposit date:2009-10-01
Release date:2010-03-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis for Specific Recognition of Reelin by Its Receptors
Structure, 18, 2010
4ZRQ
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BU of 4zrq by Molmil
E88 deletion mutant of CD320 in complex with TC2
Descriptor: CALCIUM ION, CD320 antigen, CYANOCOBALAMIN, ...
Authors:Alam, A, Locher, K.P.
Deposit date:2015-05-12
Release date:2016-07-20
Last modified:2021-08-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis of transcobalamin recognition by human CD320 receptor.
Nat Commun, 7, 2016
7QBG
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BU of 7qbg by Molmil
TC:CD320 in complex with nanobody TC-Nb4
Descriptor: Anti-TC:CD320 nanobody TC-Nb4, CALCIUM ION, CD320 antigen, ...
Authors:Bloch, J.S, Locher, K.P.
Deposit date:2021-11-19
Release date:2022-03-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Generation of nanobodies targeting the human, transcobalamin-mediated vitamin B 12 uptake route.
Faseb J., 36, 2022
2XRC
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BU of 2xrc by Molmil
Human complement factor I
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, HUMAN COMPLEMENT FACTOR I
Authors:Roversi, P, Johnson, S, Lea, S.M.
Deposit date:2010-09-13
Release date:2011-07-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Structural Basis for Complement Factor I Control and its Disease-Associated Sequence Polymorphisms.
Proc.Natl.Acad.Sci.USA, 108, 2011
7WQX
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BU of 7wqx by Molmil
Structure of Inactive-EP
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Enteropeptidase
Authors:Yang, X.L, Ding, Z.Y, Huang, H.J.
Deposit date:2022-01-26
Release date:2022-10-26
Last modified:2022-11-23
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Cryo-EM structures reveal the activation and substrate recognition mechanism of human enteropeptidase.
Nat Commun, 13, 2022
8EM4
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BU of 8em4 by Molmil
Cryo-EM structure of LRP2 at pH 7.5
Descriptor: 2-acetamido-2-deoxy-beta-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Beenken, A, Cerutti, G, Brasch, J, Fitzpatrick, A.W, Barasch, J, Shapiro, L.
Deposit date:2022-09-26
Release date:2023-02-08
Last modified:2023-03-08
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:Structures of LRP2 reveal a molecular machine for endocytosis.
Cell, 186, 2023
3T5O
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BU of 3t5o by Molmil
Crystal Structure of human Complement Component C6
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CADMIUM ION, Complement component C6, ...
Authors:Aleshin, A.E, Stec, B, Bankston, L.A, DiScipio, R.G, Liddington, R.C.
Deposit date:2011-07-27
Release date:2012-02-01
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.869 Å)
Cite:Structure of Complement C6 Suggests a Mechanism for Initiation and Unidirectional, Sequential Assembly of Membrane Attack Complex (MAC).
J.Biol.Chem., 287, 2012
8EM7
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BU of 8em7 by Molmil
Cryo-EM structure of LRP2 at pH 5.2
Descriptor: 2-acetamido-2-deoxy-beta-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Beenken, A, Cerutti, G, Fitzpatrick, A.W, Barasch, J, Shapiro, L.
Deposit date:2022-09-27
Release date:2023-02-08
Last modified:2023-03-08
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Structures of LRP2 reveal a molecular machine for endocytosis.
Cell, 186, 2023
7FFN
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BU of 7ffn by Molmil
Cryo-EM structure of VEEV VLP-LDLRAD3-D1 complex at the 5-fold axes
Descriptor: CALCIUM ION, Capsid protein, Low-density lipoprotein receptor class A domain-containing protein 3, ...
Authors:Zhang, X, Xiang, Y, Ma, J, Ma, B, Huang, C.
Deposit date:2021-07-23
Release date:2021-10-20
Last modified:2021-11-17
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of Venezuelan equine encephalitis virus with its receptor LDLRAD3.
Nature, 598, 2021
7FFF
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BU of 7fff by Molmil
Structure of Venezuelan equine encephalitis virus with the receptor LDLRAD3
Descriptor: CALCIUM ION, Capsid protein, Low-density lipoprotein receptor class A domain-containing protein 3, ...
Authors:Zhang, X, Xiang, Y, Ma, J, Ma, B, Huang, C.
Deposit date:2021-07-23
Release date:2021-10-20
Last modified:2021-11-17
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of Venezuelan equine encephalitis virus with its receptor LDLRAD3.
Nature, 598, 2021
8IHP
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BU of 8ihp by Molmil
Structure of Semliki Forest virus VLP in complex with the receptor VLDLR-LA3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Capsid protein, ...
Authors:Cao, D, Ma, B, Cao, Z, Zhang, X, Xiang, Y.
Deposit date:2023-02-23
Release date:2023-04-12
Last modified:2023-05-24
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of Semliki Forest virus in complex with its receptor VLDLR.
Cell, 186, 2023
7QBE
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BU of 7qbe by Molmil
TC:CD320 in complex with nanobody TC-Nb11
Descriptor: Anti-transcobalamin-2 nanobody TC-Nb11, CALCIUM ION, CD320 antigen, ...
Authors:Bloch, J.S, Locher, K.P.
Deposit date:2021-11-19
Release date:2022-03-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3 Å)
Cite:Generation of nanobodies targeting the human, transcobalamin-mediated vitamin B 12 uptake route.
Faseb J., 36, 2022
8B0F
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BU of 8b0f by Molmil
CryoEM structure of C5b8-CD59
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Bubeck, D, Couves, E.C, Gardner, S.
Deposit date:2022-09-07
Release date:2023-02-22
Last modified:2023-03-01
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis for membrane attack complex inhibition by CD59.
Nat Commun, 14, 2023
8UFC
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BU of 8ufc by Molmil
Eastern equine encephalitis virus (PE-6) VLP in complex with VLDLR LA(1-2) (asymmetric unit)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Capsid protein, ...
Authors:Adams, L.J, Fremont, D.H, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2023-10-04
Release date:2024-01-17
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Structural and functional basis of VLDLR usage by Eastern equine encephalitis virus.
Cell, 187, 2024

 

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