6IIS
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COMPLEX STRUCTURE OF THE HRP3 PWWP DOMAIN WITH BOTH A 16-BP TA-RICH DNA AND AN H3K36ME3-CONTAINING HISTONE PEPTIDE
Descriptor:Hepatoma-derived growth factor-related protein 3, 16-bp TA-rich DNA, H3K36me3 peptide
Authors:Wang, Z., Tian, W.
Deposit date:2018-10-07
Release date:2019-04-24
Method:X-RAY DIFFRACTION (2.358 Å)
Cite:Complex structure of the HRP3 PWWP domain with both a 16-bp TA-rich DNA and an H3K36me3-containing histone peptide
Nucleic Acids Res., 2019
4HCZ
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PHF1 TUDOR IN COMPLEX WITH H3K36ME3
Descriptor:PHD finger protein 1, H3L-like histone
Authors:Musselman, C.A., Roy, S., Nunez, J., Kutateladze, T.G.
Deposit date:2012-10-01
Release date:2012-11-14
Last modified:2012-12-19
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Molecular basis for H3K36me3 recognition by the Tudor domain of PHF1.
Nat.Struct.Mol.Biol., 19, 2012
5CIU
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STRUCTURAL BASIS OF THE RECOGNITION OF H3K36ME3 BY DNMT3B PWWP DOMAIN
Descriptor:DNA (cytosine-5)-methyltransferase 3B, Histone H3.2, GLYCEROL
Authors:Rondelet, G., DAL MASO, T., Willems, L., Wouters, J.
Deposit date:2015-07-13
Release date:2016-03-30
Last modified:2019-06-12
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Structural basis for recognition of histone H3K36me3 nucleosome by human de novo DNA methyltransferases 3A and 3B.
J.Struct.Biol., 194, 2016
5CIY
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STRUCTURAL BASIS OF THE RECOGNITION OF H3K36ME3 BY DNMT3B PWWP DOMAIN
Descriptor:Modification methylase HhaI, DNA (5'-D(P*CP*CP*AP*TP*GP*CP*GP*CP*TP*GP*AP*C)-3'), DNA (5'-D(P*GP*TP*CP*AP*GP*(3DR)P*GP*CP*AP*TP*GP*G)-3'), ...
Authors:Rondelet, G., DAL MASO, T., Willems, L., Wouters, J.
Deposit date:2015-07-13
Release date:2016-03-30
Last modified:2019-06-12
Method:X-RAY DIFFRACTION (1.594 Å)
Cite:Structural basis for recognition of histone H3K36me3 nucleosome by human de novo DNA methyltransferases 3A and 3B.
J.Struct.Biol., 194, 2016
2X35
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MOLECULAR BASIS OF HISTONE H3K36ME3 RECOGNITION BY THE PWWP DOMAIN OF BRPF1.
Descriptor:PEREGRIN
Authors:Vezzoli, A., Bonadies, N., Allen, M.D., Freund, S.M.V., Santiveri, C.M., Kvinlaug, B., Huntly, B.J.P., Gottgens, B., Bycroft, M.
Deposit date:2010-01-21
Release date:2010-02-02
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular Basis of Histone H3K36Me3 Recognition by the Pwwp Domain of Brpf1.
Nat.Struct.Mol.Biol., 17, 2010
2X4W
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MOLECULAR BASIS OF HISTONE H3K36ME3 RECOGNITION BY THE PWWP DOMAIN OF BRPF1.
Descriptor:PEREGRIN, HISTONE H3.2, FORMIC ACID
Authors:Vezzoli, A., Bonadies, N., Allen, M.D., Freund, S.M.V., Santiveri, C.M., Kvinlaug, B., Huntly, B.J.P., Gottgens, B., Bycroft, M.
Deposit date:2010-02-02
Release date:2010-04-21
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Molecular Basis of Histone H3K36Me3 Recognition by the Pwwp Domain of Brpf1.
Nat.Struct.Mol.Biol., 17, 2010
2X4X
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MOLECULAR BASIS OF HISTONE H3K36ME3 RECOGNITION BY THE PWWP DOMAIN OF BRPF1.
Descriptor:PEREGRIN, HISTONE H3.2, SULFATE ION
Authors:Vezzoli, A., Bonadies, N., Allen, M.D., Freund, S.M.V., Santiveri, C.M., Kvinlaug, B., Huntly, B.J.P., Gottgens, B., Bycroft, M.
Deposit date:2010-02-02
Release date:2010-04-21
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Molecular Basis of Histone H3K36Me3 Recognition by the Pwwp Domain of Brpf1.
Nat.Struct.Mol.Biol., 17, 2010
2X4Y
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MOLECULAR BASIS OF HISTONE H3K36ME3 RECOGNITION BY THE PWWP DOMAIN OF BRPF1.
Descriptor:PEREGRIN, HISTONE H3.2, SULFATE ION
Authors:Vezzoli, A., Bonadies, N., Allen, M.D., Freund, S.M.V., Santiveri, C.M., Kvinlaug, B., Huntly, B.J.P., Gottgens, B., Bycroft, M.
Deposit date:2010-02-02
Release date:2010-04-21
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular Basis of Histone H3K36Me3 Recognition by the Pwwp Domain of Brpf1.
Nat.Struct.Mol.Biol., 17, 2010
2M0O
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THE SOLUTION STRUCTURE OF HUMAN PHF1 IN COMPLEX WITH H3K36ME3
Descriptor:PHD finger protein 1, H3K36me3 peptide
Authors:Song, J., Patel, D.J.
Deposit date:2012-10-30
Release date:2013-01-16
Last modified:2013-02-27
Method:SOLUTION NMR
Cite:An H3K36 Methylation-Engaging Tudor Motif of Polycomb-like Proteins Mediates PRC2 Complex Targeting.
Mol.Cell, 49, 2013
4PLI
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STRUCTURE OF THE CHROMODOMAIN OF MRG2 IN COMPLEX WITH H3K36ME3
Descriptor:At1g02740, H3K36me3
Authors:Liu, Y., Huang, Y.
Deposit date:2014-05-18
Release date:2015-07-22
Last modified:2016-05-04
Method:X-RAY DIFFRACTION (1.651 Å)
Cite:Regulation of arabidopsis flowering by the histone mark readers MRG1/2 via interaction with CONSTANS to modulate FT expression.
Plos Genet., 10, 2014
4PLL
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STRUCTURE OF THE CHROMODAOMAIN OF MRG2 IN COMPLEX WITH H3K36ME3
Descriptor:At1g02740, H3K36me3
Authors:Liu, Y., Huang, Y.
Deposit date:2014-05-18
Release date:2015-07-22
Last modified:2016-05-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Regulation of arabidopsis flowering by the histone mark readers MRG1/2 via interaction with CONSTANS to modulate FT expression.
Plos Genet., 10, 2014
4NS5
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CRYSTAL STRUCTURE OF HUMAN BS69 BROMO-ZINC FINGER-PWWP
Descriptor:Zinc finger MYND domain-containing protein 11, ZINC ION
Authors:Wang, J.C., Qin, S., Li, F.D., Li, S., Zhang, W., Wu, J.H., Shi, Y.Y.
Deposit date:2013-11-28
Release date:2014-04-09
Last modified:2014-11-12
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of human BS69 Bromo-ZnF-PWWP reveals its role in H3K36me3 nucleosome binding.
Cell Res., 24, 2014
6J0D
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CRYSTAL STRUCTURE OF OSSUF4
Descriptor:transcription factor, ZINC ION
Authors:Wang, B., Luo, Q.
Deposit date:2018-12-24
Release date:2019-11-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The transcription factor OsSUF4 interacts with SDG725 in promoting H3K36me3 establishment.
Nat Commun, 10, 2019
2YBP
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JMJD2A COMPLEXED WITH R-2-HYDROXYGLUTARATE AND HISTONE H3K36ME3 PEPTIDE (30-41)
Descriptor:LYSINE-SPECIFIC DEMETHYLASE 4A, HISTONE H3.1T, NICKEL (II) ION, ...
Authors:Chowdhury, R., McDonough, M.A., Schofield, C.J.
Deposit date:2011-03-09
Release date:2011-03-30
Last modified:2019-01-30
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:The oncometabolite 2-hydroxyglutarate inhibits histone lysine demethylases.
EMBO Rep., 12, 2011
2YBS
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JMJD2A COMPLEXED WITH S-2-HYDROXYGLUTARATE AND HISTONE H3K36ME3 PEPTIDE (30-41)
Descriptor:LYSINE-SPECIFIC DEMETHYLASE 4A, HISTONE H3.1T, NICKEL (II) ION, ...
Authors:Chowdhury, R., Schofield, C.J.
Deposit date:2011-03-10
Release date:2011-03-30
Last modified:2019-01-30
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:The oncometabolite 2-hydroxyglutarate inhibits histone lysine demethylases.
EMBO Rep., 12, 2011
4QX8
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CRYSTAL STRUCTURE OF HISTONE DEMETHYLASE KDM2A-H3K36ME3 COMPLEX WITH ALPHA-KG
Descriptor:Lysine-specific demethylase 2A, Histone H3.2, NICKEL (II) ION, ...
Authors:Cheng, Z.J., Patel, D.J.
Deposit date:2014-07-19
Release date:2014-11-05
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A molecular threading mechanism underlies Jumonji lysine demethylase KDM2A regulation of methylated H3K36.
Genes Dev., 28, 2014
4QXB
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CRYSTAL STRUCTURE OF HISTONE DEMETHYLASE KDM2A-H3K36ME3 WITH NOG
Descriptor:Lysine-specific demethylase 2A, Histone H3.2, N-OXALYLGLYCINE, ...
Authors:Cheng, Z.J., Patel, D.J.
Deposit date:2014-07-19
Release date:2014-11-05
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A molecular threading mechanism underlies Jumonji lysine demethylase KDM2A regulation of methylated H3K36.
Genes Dev., 28, 2014
2YBK
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JMJD2A COMPLEXED WITH R-2-HYDROXYGLUTARATE
Descriptor:LYSINE-SPECIFIC DEMETHYLASE 4A, NICKEL (II) ION, ZINC ION, ...
Authors:Chowdhury, R., McDonough, M.A., Schofield, C.J.
Deposit date:2011-03-08
Release date:2011-04-06
Last modified:2019-01-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The oncometabolite 2-hydroxyglutarate inhibits histone lysine demethylases.
EMBO Rep., 12, 2011
4A7J
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SYMMETRIC DIMETHYLATION OF H3 ARGININE 2 IS A NOVEL HISTONE MARK THAT SUPPORTS EUCHROMATIN MAINTENANCE
Descriptor:WD REPEAT-CONTAINING PROTEIN 5, HISTONE H3.1T
Authors:Migliori, V., Muller, J., Phalke, S., Low, D., Bezzi, M., ChuenMok, W., Gunaratne, J., Capasso, P., Bassi, C., Cecatiello, V., DeMarco, A., Blackstock, W., Kuznetsov, V., Amati, B., Mapelli, M., Guccione, E.
Deposit date:2011-11-14
Release date:2012-01-11
Last modified:2012-02-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Symmetric Dimethylation of H3R2 is a Newly Identified Histone Mark that Supports Euchromatin Maintenance
Nat.Struct.Mol.Biol., 19, 2012
4AI9
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JMJD2A COMPLEXED WITH DAMINOZIDE
Descriptor:LYSINE-SPECIFIC DEMETHYLASE 4A, NICKEL (II) ION, ZINC ION, ...
Authors:Chowdhury, R., Schofield, C.J.
Deposit date:2012-02-08
Release date:2012-10-03
Last modified:2019-01-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Plant growth regulator daminozide is a selective inhibitor of human KDM2/7 histone demethylases.
J. Med. Chem., 55, 2012
6IIT
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COMPLEX STRUCTURE OF THE HRP3 PWWP DOMAIN WITH BOTH A 16-BP TA-RICH DNA AND AN H3K36ME2-CONTAINING HISTONE PEPTIDE
Descriptor:Hepatoma-derived growth factor-related protein 3, 16-bp TA-rich DNA, H3K36me2-containing histone peptide
Authors:Wang, Z., Tian, W.
Deposit date:2018-10-07
Release date:2019-04-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Complex structure of the HRP3 PWWP domain with both a 16-bp TA-rich DNA and a H3K36me2-containing histone peptide
Nucleic Acids Res., 2019
2N3A
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SOLUTION STRUCTURE OF LEDGF/P75 IBD IN COMPLEX WITH POGZ PEPTIDE (1389-1404)
Descriptor:Pogo transposable element with ZNF domain, PC4 and SFRS1-interacting protein
Authors:Tesina, P., Cermakova, K., Horejsi, M., Prochazkova, K., Fabry, M., Sharma, S., Christ, F., Demeulemeester, J., Debyser, Z., De Rijck, J., Veverka, V., Rezacova, P.
Deposit date:2015-05-26
Release date:2015-08-19
Method:SOLUTION NMR
Cite:Multiple cellular proteins interact with LEDGF/p75 through a conserved unstructured consensus motif.
Nat Commun, 6, 2015
4BD3
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PHF19 LINKS METHYLATED LYSINE 36 OF HISTONE H3 TO REGULATION OF POLYCOMB ACTIVITY
Descriptor:PHD FINGER PROTEIN 19, HISTONE H3
Authors:Lapinaite, A., Simon, B., Carlomagno, T.
Deposit date:2012-10-04
Release date:2012-10-31
Last modified:2012-12-19
Method:SOLUTION NMR
Cite:Phf19 Links Methylated Lys36 of Histone H3 to Regulation of Polycomb Activity
Nat.Struct.Mol.Biol., 19, 2012
5IN1
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CRYSTAL STRUCTURE OF THE MRG701 CHROMODOMAIN
Descriptor:MRG701, SULFATE ION, 1,2-ETHANEDIOL
Authors:Huang, Y., Liu, Y.
Deposit date:2016-03-07
Release date:2017-03-01
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural studies on MRG701 chromodomain reveal a novel dimerization interface of MRG proteins in green plants
Protein Cell, 7, 2016
6IIP
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APO-FORM STRUCTURE OF THE HRP3 PWWP DOMAIN
Descriptor:Hepatoma-derived growth factor-related protein 3, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, SULFATE ION
Authors:Wang, Z., Tian, W.
Deposit date:2018-10-07
Release date:2019-04-24
Method:X-RAY DIFFRACTION (0.951 Å)
Cite:Apo-form structure of the HRP3 PWWP domain
Nucleic Acids Res., 2019
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PDB entries from 2020-08-05