PDB: 1081 件ウェブページステータス検索Chemie searchBIRD

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8FI1	Structure of Lettuce C20G bound to DFHO 分子名称: (5Z)-5-[(3,5-difluoro-4-hydroxyphenyl)methylidene]-2-[(E)-(hydroxyimino)methyl]-3-methyl-3,5-dihydro-4H-imidazol-4-one, Lettuce DNA aptamer, MAGNESIUM ION, ... 著者 Passalacqua, L.F.M, Ferre-D'Amare, A.R. 登録日 2022-12-15 公開日 2023-05-10 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Intricate 3D architecture of a DNA mimic of GFP. Nature, 618, 2023
8FI7	Structure of Lettuce C20T bound to DFHO 分子名称: (5Z)-5-[(3,5-difluoro-4-hydroxyphenyl)methylidene]-2-[(E)-(hydroxyimino)methyl]-3-methyl-3,5-dihydro-4H-imidazol-4-one, Lettuce DNA aptamer, MAGNESIUM ION, ... 著者 Passalacqua, L.F.M, Ferre-D'Amare, A.R. 登録日 2022-12-15 公開日 2023-05-10 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Intricate 3D architecture of a DNA mimic of GFP. Nature, 618, 2023
8FHZ	Structure of Lettuce aptamer bound to DFHO 分子名称: (5Z)-5-[(3,5-difluoro-4-hydroxyphenyl)methylidene]-2-[(E)-(hydroxyimino)methyl]-3-methyl-3,5-dihydro-4H-imidazol-4-one, Lettuce DNA aptamer, MAGNESIUM ION, ... 著者 Passalacqua, L.F.M, Ferre-D'Amare, A.R. 登録日 2022-12-15 公開日 2023-05-10 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Intricate 3D architecture of a DNA mimic of GFP. Nature, 618, 2023
8FI8	Structure of Lettuce C20T bound to DFAME 分子名称: Lettuce DNA aptamer, MAGNESIUM ION, POTASSIUM ION, ... 著者 Passalacqua, L.F.M, Ferre-D'Amare, A.R. 登録日 2022-12-15 公開日 2023-05-10 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Intricate 3D architecture of a DNA mimic of GFP. Nature, 618, 2023
8FHX	Structure of Lettuce aptamer bound to DFHBI-1T 分子名称: (5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2-methyl-3-(2,2,2-trifluoroethyl)-3,5-dihydro-4H-imidazol-4-one, Lettuce DNA aptamer, MAGNESIUM ION, ... 著者 Passalacqua, L.F.M, Ferre-D'Amare, A.R. 登録日 2022-12-15 公開日 2023-05-10 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Intricate 3D architecture of a DNA mimic of GFP. Nature, 618, 2023
4KZD	Crystal structure of an RNA aptamer in complex with fluorophore and Fab 分子名称: 4-(3,5-difluoro-4-hydroxybenzyl)-1,2-dimethyl-1H-imidazol-5-ol, BL3-6 Fab antibody, heavy chain, ... 著者 Huang, H, Suslov, N.B, Li, N, Koldobskaya, Y, Rice, P.A, Piccirilli, J.A. 登録日 2013-05-29 公開日 2014-06-18 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.186 Å) 主引用文献 A G-quadruplex-containing RNA activates fluorescence in a GFP-like fluorophore. Nat.Chem.Biol., 10, 2014
4KZE	Crystal structure of an RNA aptamer in complex with Fab 分子名称: BL3-6 Fab antibody, heavy chain, light chain, ... 著者 Huang, H, Suslov, N.B, Li, N, Koldobskaya, Y, Rice, P.A, Piccirilli, J.A. 登録日 2013-05-29 公開日 2014-06-18 最終更新日 2014-07-30 実験手法 X-RAY DIFFRACTION (2.404 Å) 主引用文献 A G-quadruplex-containing RNA activates fluorescence in a GFP-like fluorophore. Nat.Chem.Biol., 10, 2014
6HUT	GFP8 - a stabilized variant of cycle-3 GFP 分子名称: Green fluorescent protein 著者 Petek, M, Rangel Pereira, M. 登録日 2018-10-09 公開日 2020-01-22 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.29 Å) 主引用文献 GFP8 - a stabilized variant of cycle-3 GFP To Be Published
6ZQO	EYFP mutant - F165G 分子名称: G protein/GFP fusion protein, SULFATE ION 著者 Pletnev, V.Z, Pletnev, S.V, Pletneva, N.V. 登録日 2020-07-10 公開日 2021-06-16 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Amino acid residue at the 165th position tunes EYFP chromophore maturation. A structure-based design. Comput Struct Biotechnol J, 19, 2021
4DXI	Crystal Structure of an Ancestor of All Faviina Proteins 分子名称: GREEN FLUORESCENT PROTEIN, MAGNESIUM ION 著者 Kim, H, Wachter, R.M. 登録日 2012-02-27 公開日 2013-02-27 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 A hinge migration mechanism unlocks the evolution of green-to-red photoconversion in GFP-like proteins. Structure, 23, 2015
4GOB	Low pH Crystal Structure of a reconstructed Kaede-type Red Fluorescent Protein, Least Evolved Ancestor (LEA) 分子名称: Kaede-type Fluorescent Protein 著者 Kim, H, Grunkemeyer, T.J, Chen, L, Fromme, R, Wachter, R.M. 登録日 2012-08-19 公開日 2013-07-31 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.53 Å) 主引用文献 Acid-base catalysis and crystal structures of a least evolved ancestral GFP-like protein undergoing green-to-red photoconversion. Biochemistry, 52, 2013
6ZWC	Z-SBTub2 photoswitch bound to tubulin-DARPin D1 complex 分子名称: 2-[2-(3,4,5-trimethoxyphenyl)ethyl]-1,3-benzothiazole, Designed Ankyrin Repeat Protein (DARPIN) D1, GUANOSINE-5'-DIPHOSPHATE, ... 著者 Wranik, M, Weinert, T, Olieric, N, Gao, L, Kraus, Y.C.M, Bingham, R, Ntouliou, E, Ahlfeld, J, Thorn-Seshold, O, Steinmetz, M.O, Standfuss, J. 登録日 2020-07-28 公開日 2020-12-23 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.04 Å) 主引用文献 A Robust, GFP-Orthogonal Photoswitchable Inhibitor Scaffold Extends Optical Control over the Microtubule Cytoskeleton. Cell Chem Biol, 28, 2021
6ZWB	Z-SBTub3 photoswitch bound to tubulin-DARPin D1 complex 分子名称: 5-[2-(1,3-benzothiazol-2-yl)ethyl]-2-methoxy-phenol, Designed Ankyrin Repeat Protein (DARPIN) D1, GUANOSINE-5'-DIPHOSPHATE, ... 著者 Wranik, M, Weinert, T, Olieric, N, Gao, L, Kraus, Y.C.M, Bingham, R, Ntouliou, E, Ahlfeld, J, Thorn-Seshold, O, Steinmetz, M.O, Standfuss, J. 登録日 2020-07-28 公開日 2020-12-23 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.747 Å) 主引用文献 A Robust, GFP-Orthogonal Photoswitchable Inhibitor Scaffold Extends Optical Control over the Microtubule Cytoskeleton. Cell Chem Biol, 28, 2021
3ST3	Dreiklang - off state 分子名称: Dreiklang, PHOSPHATE ION 著者 Brakemann, T, Weber, G, Andresen, M, Stiel, A.C, Jakobs, S, Wahl, M.C. 登録日 2011-07-08 公開日 2011-09-14 最終更新日 2017-11-08 実験手法 X-RAY DIFFRACTION (1.702 Å) 主引用文献 A reversibly photoswitchable GFP-like protein with fluorescence excitation decoupled from switching. Nat.Biotechnol., 29, 2011
3ST2	Dreiklang - equilibrium state 分子名称: Dreiklang, PHOSPHATE ION 著者 Brakemann, T, Weber, G, Andresen, M, Stiel, A.C, Jakobs, S, Wahl, M.C. 登録日 2011-07-08 公開日 2011-09-14 最終更新日 2017-11-08 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 A reversibly photoswitchable GFP-like protein with fluorescence excitation decoupled from switching. Nat.Biotechnol., 29, 2011
3ST4	Dreiklang - on state 分子名称: Dreiklang, PHOSPHATE ION 著者 Brakemann, T, Weber, G, Andresen, M, Stiel, A.C, Jakobs, S, Wahl, M.C. 登録日 2011-07-08 公開日 2011-09-14 最終更新日 2017-11-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 A reversibly photoswitchable GFP-like protein with fluorescence excitation decoupled from switching. Nat.Biotechnol., 29, 2011
1B9C	Green Fluorescent Protein Mutant F99S, M153T and V163A 分子名称: PROTEIN (GREEN FLUORESCENT PROTEIN) 著者 Battistutta, R, Negro, A, Zanotti, G. 登録日 1999-02-09 公開日 2000-11-17 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure and refolding properties of the mutant F99S/M153T/V163A of the green fluorescent protein. Proteins, 41, 2000
1C4F	GREEN FLUORESCENT PROTEIN S65T AT PH 4.6 分子名称: GREEN FLUORESCENT PROTEIN 著者 Elsliger, M.A, Wachter, R.M, Kallio, K, Hanson, G.T, Remington, S.J. 登録日 1999-08-21 公開日 1999-08-31 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Structural and spectral response of green fluorescent protein variants to changes in pH. Biochemistry, 38, 1999
1HCJ	Photoproduct of the wild-type Aequorea victoria Green Fluorescent Protein 分子名称: GREEN FLUORESCENT PROTEIN 著者 Van Thor, J.J, Gensch, T, Hellingwerf, K.J, Johnson, L. 登録日 2001-05-04 公開日 2001-12-07 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Phototransformation of Green Fluorescent Protein with Uv and Visible Light Leads to Decarboxylation of Glutamate 222 Nat.Struct.Biol., 9, 2002
1W7U	Photoproduct of the Wild-Type Aequorea victoria Green Fluorescent Protein after structural annealing at 170K 分子名称: GREEN FLUORESCENT PROTEIN 著者 Van Thor, J.J, Georgiev, G.Y, Towrie, M, Sage, J.T. 登録日 2004-09-09 公開日 2005-07-20 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Ultrafast and Low Barrier Motions in the Photoreactions of the Green Fluorescent Protein J.Biol.Chem., 280, 2005
1W7S	Wild-Type Aequorea victoria Green Fluorescent Protein 分子名称: GREEN FLUORESCENT PROTEIN 著者 Van Thor, J.J, Georgiev, G.Y, Towrie, M, Sage, J.T. 登録日 2004-09-09 公開日 2005-07-20 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Ultrafast and Low Barrier Motions in the Photoreactions of the Green Fluorescent Protein J.Biol.Chem., 280, 2005
1W7T	Photoproduct of the Wild-Type Aequorea victoria Green Fluorescent Protein at 100 K 分子名称: GREEN FLUORESCENT PROTEIN 著者 Van Thor, J.J, Georgiev, G.Y, Towrie, M, Sage, J.T. 登録日 2004-09-09 公開日 2005-07-20 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Ultrafast and Low Barrier Motions in the Photoreactions of the Green Fluorescent Protein J.Biol.Chem., 280, 2005
5WJ4	Crystal structure of redox-sensitive green fluorescent protein Clover mutant roClover1 分子名称: Green fluorescent protein 著者 Liu, C, Campbell, B.C, Petsko, G.A. 登録日 2017-07-21 公開日 2018-01-17 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.631 Å) 主引用文献 Crystal Structure of Green Fluorescent Protein Clover and Design of Clover-Based Redox Sensors. Structure, 26, 2018
5WJ2	Crystal structure of the green fluorescent protein Clover 分子名称: Green fluorescent protein 著者 Liu, C, Campbell, B.C, Petsko, G.A. 登録日 2017-07-21 公開日 2018-01-17 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.409 Å) 主引用文献 Crystal Structure of Green Fluorescent Protein Clover and Design of Clover-Based Redox Sensors. Structure, 26, 2018
5WJ3	Crystal structure of green fluorescent protein Clover mutant S147C/Q204C 分子名称: Green fluorescent protein 著者 Liu, C, Campbell, B.C, Petsko, G.A. 登録日 2017-07-21 公開日 2018-01-17 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.351 Å) 主引用文献 Crystal Structure of Green Fluorescent Protein Clover and Design of Clover-Based Redox Sensors. Structure, 26, 2018

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